Gene detail

Detailed information of ENSKFPP00000028542.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_031549813.1, eIF-2-alpha kinase activator GCN1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKFPT00000030933

ATGGGGTCCCTGGCCAAACATCTGGATAAGGAAGATCCCAAGGTCAAACCTATCGTTAATAAGCTGATCAAAGCTCTCTCCACGCCATCACAACAGGTCCAACAAGCTGTTGCTAACTGTCTGCCGCCGTTAGTCCCGGCCATTAAGGCGGAAGCGCCAGAACTCGTCAAAATGCTACTGAATCAATTATTAGATTCAACTGTGTATGGAGAACGTAAGGGAGCCGCCTATGGGCTAGCAGGGCTGGTCAAAGGATTAGGAATCCTATACCTCAAACAGCTAAACATCATGACAACACTACAAGAAGCCAtacagaacaagaaaaactacaGACACCGTGAAGGTGCGCTGTTTGCATTCGAGATGTTGTGTACCATGCTTGGTAGACTCTTTGAACCTTACGTCGTCCACGTGTTGCCACACCTACTGCTCTGCTTTGGAGATGGCAGCCAGTACGTCAGAGAGgcAACTGACGACACCGCCCGGGCTGTCATGAAACACCTCAGTGCTCATGGAGTCAAGCTCGTCCTTCCTTCTTTACTCTCCGCTTTGAAGGAAGATTCCTGGAGGACCAAGTCAGGAAGTGTGGAGTTACTAGGTGCTATGGCATACTGTGCTCCAAAGCAGCTGTCCTCGTGTCTGCCCAGTATCGTACCGATGCTGTGCAAGGTGCTCACAGACTCGCATCACAAGGTACAGAAGTCTGGTGCCCAGGCCCTCAGGCAGATAGGCGCCGTCATAAGGAACCCAGAAATCCAAGCCATTTCCTCAGTCCTTCTTGAAGCCCTTATGGACCCCTCCTCCAAGACGGCTCGTTGTCTACAGGTCTTGTTACAAACATCTTTCGTCCATTTCATCGATTCCCCTTCACTCGCTCTTATCATGCCTGTTCTGGAACGTGCTTTGAACGAACGCTCCACTGAAACCAAGAAGATGGCGGCGCAGATTATTGGCAATATGTACTCGCTTACAGACCCCAAGGACCTGTTACCGTACCTATCATCTGTTGTACCTGGCTTGAAGCAGTCCCTACTGGACCCGGTACCCGAGGTTCGTGCAGTATCCGCCCGTGCTTTAGGTGCTCTAGTCAAAGGAATGGGCGAAGAACACTTCGAAGACTTGTTGCCCTGGTTGATGGAGACGCTGACTTCAGAGAACAGTAGTGTGGATAGATCTGGTGCAGCACAAGGTATCAGTGAAGTCTTGTTCGGCCTGGGTAAGGCTCGTCTGGACAAGCTCATGCCAGATGTCATCAGTACGACAGAAAAGACCGAGTTAGCACCGCACGTGCGCGAGGGGTACCTCATGCTGTACATATATCTACCCGGTACCTTTAAAGAGGAATTCACTGAATTTATCGGTCCTATTCTCTCCTCGATCATCCAGGGTCTCGCAGACGAGGTTGAATTCGTACGTGATACGTCACTTCGCGCCGGCCAGCGCATCGTCAACATGTACGCAGAGACCGCTATTGAACTGTTCCTGCCCGAGATGGAGAGAGGCTTGTTTGACGAGAACTGGCGTATCAGACACAGTTCTATTCAACTGCTGGGGGATCTGTTGTACAAGATATCTGGAGTGACGGGCAAGATGAGCACTGAAGGAGACGAGGATGATAATTTTGGAACTCAGCATTCGAACCAGAAAATCATCAATGCCCTCAGCCTCGAGCGCCGTAACCGCGTCTTGGCCGGCCTCTACATGGGTAGGTCTGATGTCTCCCTGATGGTCAGACAATCAGCACTTCACGTCTGGAAGGTCATTGTACCGAACACTCCCCGAGTACTGCGCGAGATATTATCGACTCTCTTCTCGTTGCTTCTCGGCTGTCTTGCGAGTAAGAGTTTTGATAAAACTCAGGTTGCAGCACGTACGTTGGGTGATCTTGTCCGGAAACTAGGTGAGCGTGTCCTACCTGAGATTATTCCGATCCTGGAGGAGGGGTTAAAGAGCAAGAAGAGTAATGAACGACAAGGTGTCTGTATTGGGCTGAGCGAGATTATCAGCTCAACAAGCAAGGAACAGGTAGCCCAGTACGTGGATTCCTTGGTCCCCACAGTTCGCCGCACCCTGTGTGATCCCCTGCCTGAGGTGCGACAAGCGGCGGCCAAGACCTTTAACAACTTGTACTCTACTATTGGAACAAAGGCTTTGGATGAAATTCTGACTGATCTGCTGGGGAAAATGGATGATCCATCGTTATCAGAGTACGCCCTGGATGGACTCAGACAAGTCATGCAAGTCAACAGTCGTGTTGTTCTCCCCTTCCTTGTACCCAAGCTGATCACTCCTCCAGTCAACGCCCGTGCATTAGCCATCTTATCGTCAGTAGCAGGCGAAGCGTTAGTGCGACACTTAACCAAGATATTACCGGCCCTTCTTTACTCCATACAAGAAGCCATGTCTACTGGGAGCGACGGACAAGAGGAGCTCGATGGTGCTGAGAAGCTTGTCCTGTCGGTGGAGAGCGAGGATGGGGTGAGAACAATCATTGAGGAGTTGTTGGAAGCAGCCAAAAACAAGAACCCTGCCCTGAGGAAGGCCGCTGTTATCCTTCTATACAAGTTCTGTAGCAAGACCAAGGCAGATTATTCCCAGTTCATCACCACTTTGTTTCGGCATGTCGTACTGCTTTTGAACGACGAGGACGTTGATGTTGTAGTGAACAGCTGGGAAACTTTGAAGGCTATCATCGAGGGTCTGCAACCAAGCGAACAGCTTCAGTACATCGCGCCATTGCTTCAAGCCATCAGATATGTGCGTGATGAAGTCAAAGATGGAGAACTACCAGGGTTCTGTCTTCCTACCAAGGGTATTAAGTGCATTCTACCAGTCTTCCGTGAAGGTATTCTCACAGGCACCCCAGAGCTGAAAGAACAAGCAGCCAACGGACTGGGTGAAGTCATCAAGCTGACCAGCGCTGCTGCGCTGAAACCATCTGTAGTCAACATCACTGGTCCGCTTATCCGTATCCTTGGTGACAGATTCAGCTGGAATGTTAAGGTGGCTGTGCTGGAGACACTGGGTCTGTTGCTAGGCAAGGTTGGCGTCATGTTGAAGCCTTTCTTGCCACAACTACAGACCACATTTGTCAAGGCGTTAAACGATCCGACCAAGACTGTTCGAGTCAAAGCTGCTTGCGCACTTCACAAGCTCGTTATCCTCCACACGCGTGTTGATCCACTGTTCACCGAACTACAGAACTGTGTCAAGAACAATGAAGACAACGCTATCAAGGAGACGTTATTGCAGGCATTAAAGGGAGTGATAAGTGGTGCTGGTCAGAAGATGAGTGAAACTGTTCGAAAAACACTGACAACAACCCTACTGTCCTTGTTAGGACACGGTGAGAACATCATACGGGTTGCCGCAGGGATCTGTATTGGATCCTTAGCCACTGTTTTACCTGATAATGAACTAGAAAGCCTGATTAGTGACCACCTCACAGTTAACGATCCTTCTGTCGACTGGTTTCTGCGCCACGGTCACGCTATCGCCCTGTCAGCGGTGTTGCACGATGCACCAGACAAGGTCTTGGCATGCGGGCtatatgacgtcatcaccGATGCTGCTGTTACCCATGCCTCGACGGACAGGATTCCAATTGGAAGTTTTGGCGTTCGTTCTCTGGGATTCCTGTTGTCGCACTCCAAGAAACAATCCCAGAAACCAGACCCACAAGTCGTGCAGACGTTAACTCAGGTAATCCAGACCGGTTCCACAGATATTCGTAGCCTATCCGCGTCTGTGGTTAAACATGCATCCAAGTCATCAGACGAGCCATTCGATTCTACCATCCTCAAGAGTATTGTACCTGCACTGATAGTCTCTGCTAAAGATAAGAACACTGCTGTGAAGGCATCTGCCGAGGCCGCGCTTGCAGATGTCTTGAAGCTAAGCTACGGCGACGACACGTTACAGGCTTGTTCGCGGTTCCTGGATAGCAACAATGCTGATCTCCTGAACGACATGTGCAGACGAAACCTACGACGCATTGCTAACCAAGAAGATCTTGGACTTGATGAAGTAACGAGTCCCTATAACCTGGATATGGGTTGA

Transcript

ENSKFPT00000030933

TGGCCAAACATCTGGATAAGGAAGATCCCAAGGTGAGTATGTACCACACCCATGTAGTGTAACATGACAATCTGTGGTTATTCTGATGGGGTCCCTGGCCAAACATCTGGATAAGGAAGATCCCAAGGTCAAACCTATCGTTAATAAGCTGATCAAAGCTCTCTCCACGCCATCACAACAGGTCCAACAAGCTGTTGCTAACTGTCTGCCGCCGTTAGTCCCGGCCATTAAGGCGGAAGCGCCAGAACTCGTCAAAATGCTACTGAATCAATTATTAGATTCAACTGTGTATGGAGAACGTAAGGGAGCCGCCTATGGGCTAGCAGGGCTGGTCAAAGGATTAGGAATCCTATACCTCAAACAGCTAAACATCATGACAACACTACAAGAAGCCAtacagaacaagaaaaactacaGACACCGTGAAGGTGCGCTGTTTGCATTCGAGATGTTGTGTACCATGCTTGGTAGACTCTTTGAACCTTACGTCGTCCACGTGTTGCCACACCTACTGCTCTGCTTTGGAGATGGCAGCCAGTACGTCAGAGAGgcAACTGACGACACCGCCCGGGCTGTCATGAAACACCTCAGTGCTCATGGAGTCAAGCTCGTCCTTCCTTCTTTACTCTCCGCTTTGAAGGAAGATTCCTGGAGGACCAAGTCAGGAAGTGTGGAGTTACTAGGTGCTATGGCATACTGTGCTCCAAAGCAGCTGTCCTCGTGTCTGCCCAGTATCGTACCGATGCTGTGCAAGGTGCTCACAGACTCGCATCACAAGGTACAGAAGTCTGGTGCCCAGGCCCTCAGGCAGATAGGCGCCGTCATAAGGAACCCAGAAATCCAAGCCATTTCCTCAGTCCTTCTTGAAGCCCTTATGGACCCCTCCTCCAAGACGGCTCGTTGTCTACAGGTCTTGTTACAAACATCTTTCGTCCATTTCATCGATTCCCCTTCACTCGCTCTTATCATGCCTGTTCTGGAACGTGCTTTGAACGAACGCTCCACTGAAACCAAGAAGATGGCGGCGCAGATTATTGGCAATATGTACTCGCTTACAGACCCCAAGGACCTGTTACCGTACCTATCATCTGTTGTACCTGGCTTGAAGCAGTCCCTACTGGACCCGGTACCCGAGGTTCGTGCAGTATCCGCCCGTGCTTTAGGTGCTCTAGTCAAAGGAATGGGCGAAGAACACTTCGAAGACTTGTTGCCCTGGTTGATGGAGACGCTGACTTCAGAGAACAGTAGTGTGGATAGATCTGGTGCAGCACAAGGTATCAGTGAAGTCTTGTTCGGCCTGGGTAAGGCTCGTCTGGACAAGCTCATGCCAGATGTCATCAGTACGACAGAAAAGACCGAGTTAGCACCGCACGTGCGCGAGGGGTACCTCATGCTGTACATATATCTACCCGGTACCTTTAAAGAGGAATTCACTGAATTTATCGGTCCTATTCTCTCCTCGATCATCCAGGGTCTCGCAGACGAGGTTGAATTCGTACGTGATACGTCACTTCGCGCCGGCCAGCGCATCGTCAACATGTACGCAGAGACCGCTATTGAACTGTTCCTGCCCGAGATGGAGAGAGGCTTGTTTGACGAGAACTGGCGTATCAGACACAGTTCTATTCAACTGCTGGGGGATCTGTTGTACAAGATATCTGGAGTGACGGGCAAGATGAGCACTGAAGGAGACGAGGATGATAATTTTGGAACTCAGCATTCGAACCAGAAAATCATCAATGCCCTCAGCCTCGAGCGCCGTAACCGCGTCTTGGCCGGCCTCTACATGGGTAGGTCTGATGTCTCCCTGATGGTCAGACAATCAGCACTTCACGTCTGGAAGGTCATTGTACCGAACACTCCCCGAGTACTGCGCGAGATATTATCGACTCTCTTCTCGTTGCTTCTCGGCTGTCTTGCGAGTAAGAGTTTTGATAAAACTCAGGTTGCAGCACGTACGTTGGGTGATCTTGTCCGGAAACTAGGTGAGCGTGTCCTACCTGAGATTATTCCGATCCTGGAGGAGGGGTTAAAGAGCAAGAAGAGTAATGAACGACAAGGTGTCTGTATTGGGCTGAGCGAGATTATCAGCTCAACAAGCAAGGAACAGGTAGCCCAGTACGTGGATTCCTTGGTCCCCACAGTTCGCCGCACCCTGTGTGATCCCCTGCCTGAGGTGCGACAAGCGGCGGCCAAGACCTTTAACAACTTGTACTCTACTATTGGAACAAAGGCTTTGGATGAAATTCTGACTGATCTGCTGGGGAAAATGGATGATCCATCGTTATCAGAGTACGCCCTGGATGGACTCAGACAAGTCATGCAAGTCAACAGTCGTGTTGTTCTCCCCTTCCTTGTACCCAAGCTGATCACTCCTCCAGTCAACGCCCGTGCATTAGCCATCTTATCGTCAGTAGCAGGCGAAGCGTTAGTGCGACACTTAACCAAGATATTACCGGCCCTTCTTTACTCCATACAAGAAGCCATGTCTACTGGGAGCGACGGACAAGAGGAGCTCGATGGTGCTGAGAAGCTTGTCCTGTCGGTGGAGAGCGAGGATGGGGTGAGAACAATCATTGAGGAGTTGTTGGAAGCAGCCAAAAACAAGAACCCTGCCCTGAGGAAGGCCGCTGTTATCCTTCTATACAAGTTCTGTAGCAAGACCAAGGCAGATTATTCCCAGTTCATCACCACTTTGTTTCGGCATGTCGTACTGCTTTTGAACGACGAGGACGTTGATGTTGTAGTGAACAGCTGGGAAACTTTGAAGGCTATCATCGAGGGTCTGCAACCAAGCGAACAGCTTCAGTACATCGCGCCATTGCTTCAAGCCATCAGATATGTGCGTGATGAAGTCAAAGATGGAGAACTACCAGGGTTCTGTCTTCCTACCAAGGGTATTAAGTGCATTCTACCAGTCTTCCGTGAAGGTATTCTCACAGGCACCCCAGAGCTGAAAGAACAAGCAGCCAACGGACTGGGTGAAGTCATCAAGCTGACCAGCGCTGCTGCGCTGAAACCATCTGTAGTCAACATCACTGGTCCGCTTATCCGTATCCTTGGTGACAGATTCAGCTGGAATGTTAAGGTGGCTGTGCTGGAGACACTGGGTCTGTTGCTAGGCAAGGTTGGCGTCATGTTGAAGCCTTTCTTGCCACAACTACAGACCACATTTGTCAAGGCGTTAAACGATCCGACCAAGACTGTTCGAGTCAAAGCTGCTTGCGCACTTCACAAGCTCGTTATCCTCCACACGCGTGTTGATCCACTGTTCACCGAACTACAGAACTGTGTCAAGAACAATGAAGACAACGCTATCAAGGAGACGTTATTGCAGGCATTAAAGGGAGTGATAAGTGGTGCTGGTCAGAAGATGAGTGAAACTGTTCGAAAAACACTGACAACAACCCTACTGTCCTTGTTAGGACACGGTGAGAACATCATACGGGTTGCCGCAGGGATCTGTATTGGATCCTTAGCCACTGTTTTACCTGATAATGAACTAGAAAGCCTGATTAGTGACCACCTCACAGTTAACGATCCTTCTGTCGACTGGTTTCTGCGCCACGGTCACGCTATCGCCCTGTCAGCGGTGTTGCACGATGCACCAGACAAGGTCTTGGCATGCGGGCtatatgacgtcatcaccGATGCTGCTGTTACCCATGCCTCGACGGACAGGATTCCAATTGGAAGTTTTGGCGTTCGTTCTCTGGGATTCCTGTTGTCGCACTCCAAGAAACAATCCCAGAAACCAGACCCACAAGTCGTGCAGACGTTAACTCAGGTAATCCAGACCGGTTCCACAGATATTCGTAGCCTATCCGCGTCTGTGGTTAAACATGCATCCAAGTCATCAGACGAGCCATTCGATTCTACCATCCTCAAGAGTATTGTACCTGCACTGATAGTCTCTGCTAAAGATAAGAACACTGCTGTGAAGGCATCTGCCGAGGCCGCGCTTGCAGATGTCTTGAAGCTAAGCTACGGCGACGACACGTTACAGGCTTGTTCGCGGTTCCTGGATAGCAACAATGCTGATCTCCTGAACGACATGTGCAGACGAAACCTACGACGCATTGCTAACCAAGAAGATCTTGGACTTGATGAAGTAACGAGTCCCTATAACCTGGATATGGGTTGACTACACAACCACAACGGCAACATTCTTAGCACAGACAAATTAGATTTGCCGAATTGAACATCAAAACGAAACCGTTAATTTTCTGATTAGGATCCCCGCCTTCTCCCCTTCcatcccctccctctcccctacGGAGGAGAAATTTGTTCTGCATGCGTGGGATAACCAACGCATGAAGCTATTTTAGTCGATCACGATTCGATTGTCCTTTATCGTTAACTATTAATATTAAGGAGTTTTATGACTGACTTTAAAGTTCAAGACAAAACTAAAACAAACATACAAATGTTACAGAATAAGACTGTGTTTGtcgaaataaatgaaagtatCAGCATCTTTTGTGCGGATATTCTTCTTCCTATTTTTCGCGACTGGGAAGAATttgctttcaaaatcaaaaaataaataaaaaataaaataaagtacAATTAC

Protein

Uniprot

Uniprot term	Description
E9PVA8	Stalled ribosome sensor GCN1 OS=Mus musculus OX=10090 GN=Gcn1 PE=1 SV=1
Q92616	Stalled ribosome sensor GCN1 OS=Homo sapiens OX=9606 GN=GCN1 PE=1 SV=7
Q54WR2	eIF-2-alpha kinase activator GCN1 OS=Dictyostelium discoideum OX=44689 GN=gcn1 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02985	HEAT	HEAT repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR021133	Repeat	HEAT, type 2	Interproscan
IPR000357	Repeat	HEAT repeat	Interproscan
IPR034085	Domain	TOG domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23346	TRANSLATIONAL ACTIVATOR GCN1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006417	Biological Process	regulation of translation	Interproscan
GO:0019887	Molecular Function	protein kinase regulator activity	Interproscan
GO:0034198	Biological Process	cellular response to amino acid starvation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17263	CAND1, TIP120A; cullin-associated NEDD8-dissociated protein 1	-	Exosome	ko04147	deepkoala