Gene detail

Detailed information of ENSKFPP00000032309.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031548757.1, CDK5 regulatory subunit-associated protein 1-like [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9JLH6	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Rattus norvegicus OX=10116 GN=Cdk5rap1 PE=1 SV=1
Q8BTW8	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Mus musculus OX=10090 GN=Cdk5rap1 PE=1 SV=2
Q96SZ6	Mitochondrial tRNA methylthiotransferase CDK5RAP1 OS=Homo sapiens OX=9606 GN=CDK5RAP1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012304 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055 all species →	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF00919 all species →	UPF0004	Uncharacterized protein family UPF0004	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007197 all species →	Domain	Radical SAM	Interproscan
IPR038135 all species →	Homologous_superfamily	Methylthiotransferase, N-terminal domain superfamily	Interproscan
IPR013848 all species →	Domain	Methylthiotransferase, N-terminal	Interproscan
IPR020612 all species →	Conserved_site	Methylthiotransferase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43020 all species →	CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0051536 all species →	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0045736 all species →	Biological Process	negative regulation of cyclin-dependent protein serine/threonine kinase activity	Interproscan
GO:0035596 all species →	Molecular Function	methylthiotransferase activity	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000032309.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.