Gene detail

Detailed information of ENSKFPP00000033484.1 in Condylactis gigantea

Genomic Location: chr8:3217327...3224588
NR annotation: XP_031548764.1, propionyl-CoA carboxylase alpha chain, mitochondrial-like [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSKFPT00000036288

GACAAGATAGGAGTGACTTTCATTGGTCCCTGTACCTATGCTATAAAAAGTATGGGTGATAAGATTGAGAGTAAAATCATTGGCAAAAAAGCTGGAGTCAACACTATTCCAGGATTTGATGGTGTCGTCCAGGGAAGGCTTCAAATTATCATCCCAAGAGGCTTTGTCCAGCTTTGGAGATGACAGACTGCTGATTGAAAAGTTCATTGATGAACCAAGACACATTGAGATCCAGTCTGGAATTTCAGAAATGAAAAGTAATAAGAAAAACcactgtcttggttttaatggAAGGTCAATCTTGTAGTTCATTCGTAGACCCAGATATGCGCAGAGCCATGGGTGAACAAGCTGTCGCATTAGCAAAAGCTGTGGGTTACGACTCGGCAGGCACAGTGGAATGCATGGTTGATTCCAAGAAGAACTTCTACTTCCTGGAAATGAACACTCGGCTACAAGTGGAACATCCAATCACAGAGATGACGACAGGTGTTGATCTGGTTGAACAGATGATCAGAGTCGCTGCAGGTCATCCTTTAGAATTAAAACAGTCTGACATTCCACTAAAGGGCTGGGCCTTTGAATGTCGTGTTTATGCGGAGGATCCAACCAAGAACTTTGGGCTTCCATCTATTGGCAGACTCTACAAGTATATTGAGCCTACCCATCTGGAAAATGTACGATGTGACAGTGGTATTATTGAAGGCAGTGAGATCAGCATTTACTATGATTCCATGATATCCAAGTTAGTTTCATATGGTGACACACGAGAAGAAGCCATGGCAATTATGAATACAGCTCTGGATTCTTACGTCATTCGCGGACTGACACACAATGTGTCATTGCTCAAGGACGTGTTAAACCATCCCAAGTTCGTCGAAGGTGATTTTAACACAAAATTCCTGCCCACTGAATATCCAAAAGGTTTCAAAGGTCACCCTCTGACCGATATTGAACGTGATCAACTGTTAGTCAAGACTGCTTATATGTTTGTCCAACGAGCAAGGAAAGCGAAAATGTTCCTTAATCAGACAAGAGTAAATGCTGTAGCTAAGGAACAGGTTCAGTGGGACCTGGTAGTCACACtacagaaagaaaattatcCCATCCAGGTTAACTATATCGGCGATGGTGCTTACAAGATGATGACAGGTGATAAAACCATCTCATTCAAGCCCACCACTCCACTCTCAGCTCCTGTCTTCCACGCACTTGTCGATGATGTTGATATCTTATACCAGACTATTTCAAAGCATGGTAATGAATACAGAATTCAACACTATGGAACAATCTACAAAGTTCGTGTGCACACCAAGGCTGAGGATGACATGAAGCAATACATGCCTGACAAAGCTGAAGAAGACATGAGTCCATATCTCAAGTCGCCCATGCCTGGTAAGGTGGTATCCGTGGCAGTCGAGGTGGGTGATATCGCGCAGGAGGGACAGGAACTGGCGGTGGTGGAGGCCATGAAAATGCAAAACAGTTTACCAGCACAAATCTCCGGCAAGGTACATGTACTTTATCATTAATTCTTTGTGTGTGTTTGTGTGTcttttgggttatttttttataaatttatttcGGTGGACTTTGGGGTTTATATGTCGAAGGGTAGGTtgatttgattggttgattatttggttgattggttgattgcATCGTTCTTCAGGTCGTCAAGGTGAACTGCAAACCAGGCGATAACGTGGCCGAAGGAACCATATTGATCGAGAtgaaagaaatagaagaacaagaataacATCTCCACctctcaagaaaaaaaatgacggTATTCGACAAAGTAaactaatttttaaaatattgaaattacATAAATATAGAATATATTGTTAGCTCAGGTTGAAGGTAAATATGGACAAAGTGAAACGTGATTTTGTGACTCATCCCTAGTCTGAGAGAAGACTGTGCAACACATTTATGGTTtgctttccctttccttttcttttacttcacgTTTTTCCGTCATCTTCTAGTCAACAAACGAGAGTGGACTGGGTACTAGTCATTTATTTTGGTTTACCCGACATGCTCTGGTCAACAAACTAGAGTGTCCTGGGTTCTAGTCATTTATTTTGGTTTACCCGACATGCTCTGGTCAACAAACTAGAGTGTCCTGGGTTCTAGTCATTTATTTTGGTTTACCCGACATGCTCTGGTCAACAAACTAGAGTGTCCTGGGTACAAGTCATTTATTTTGGTTTACCCGTCATGCTCTGGTCAACAAACAAGAGTGGGAACAAACTGTTTTATTTTCCCATCATACATCTGTGCCAATACTTAGGAGGCGAAAAAGTaggatatttttgaattgaTTGTTATGAAATACTGTCGTTTTGGCTTTCTTTGAATCTAAAAAGATTAAATAGGTAATATTCGACAATAAGGGATTGTAAATCCACCTAACATATTTTAGCAATAAATTATTATCTAATTCTATTATTGATGGTCCTTGTTTTCCCGCTCAAACGCAAGTATCTGAGATGACGATGCGTTGTGAGCACGTCGCAAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91ZA3	Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Mus musculus OX=10090 GN=Pcca PE=1 SV=2
P14882	Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pcca PE=1 SV=3
P0DTA4	Propionyl-CoA carboxylase alpha chain, mitochondrial OS=Sus scrofa OX=9823 GN=PCCA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001406 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00364 all species →	Biotin_lipoyl	Biotin-requiring enzyme	Domain	Interproscan
PF02786 all species →	CPSase_L_D2	Carbamoyl-phosphate synthase L chain, ATP binding domain	Domain	Interproscan
PF02785 all species →	Biotin_carb_C	Biotin carboxylase C-terminal domain	Domain	Interproscan
PF18140 all species →	PCC_BT	Propionyl-coenzyme A carboxylase BT domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000089 all species →	Domain	Biotin/lipoyl attachment	Interproscan
IPR005479 all species →	Domain	Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain	Interproscan
IPR011054 all species →	Homologous_superfamily	Rudiment single hybrid motif	Interproscan
IPR011764 all species →	Domain	Biotin carboxylation domain	Interproscan
IPR005482 all species →	Domain	Biotin carboxylase, C-terminal	Interproscan
IPR050856 all species →	Family	Biotin-dependent Carboxylase Complex	Interproscan
IPR001882 all species →	Binding_site	Biotin-binding site	Interproscan
IPR011053 all species →	Homologous_superfamily	Single hybrid motif	Interproscan
IPR011761 all species →	Domain	ATP-grasp fold	Interproscan
IPR041265 all species →	Domain	Propionyl-coenzyme A carboxylase, BT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18866 all species →	CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004658 all species →	Molecular Function	propionyl-CoA carboxylase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000033484.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.