Gene detail

Detailed information of ENSKFPP00000033816.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031571476.1, uncharacterized protein LOC116305659, partial [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P80193	Gamma-butyrobetaine dioxygenase OS=Pseudomonas sp. (strain AK-1) OX=29440 PE=1 SV=1
Q98KK0	Probable gamma-butyrobetaine dioxygenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=mll1440 PE=3 SV=1
A0A4V8H042	[2-(trimethylamino)ethyl]phosphonate dioxygenase OS=Leisingera caerulea OX=506591 GN=tmpA PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005841 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06155 all species →	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan
PF02668 all species →	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038492 all species →	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR050411 all species →	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan
IPR042098 all species →	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR010376 all species →	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan
IPR003819 all species →	Domain	TauD/TfdA-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696 all species →	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0045329 all species →	Biological Process	carnitine biosynthetic process	Interproscan
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00471	BBOX1; gamma-butyrobetaine dioxygenase	EC:1.14.11.1	Lysine degradation	ko00310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.