Gene detail

Detailed information of ENSKFPP00000033983.1 in Condylactis gigantea

Genomic Location: chr8:9088089...9096947
NR annotation: XP_031565583.1, uncharacterized protein LOC116300783 isoform X2 [Actinia tenebrosa]
Species Condylactis gigantea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSKFPT00000036845

ATGGACAAACCAACCACACAGTTGTCTACATCAATATCTCCTAGTGCTTTGGATTcgttttctttgtcttcagGGAATCAAGGAGAGATCCCAGAGTCATCTTTGTTTCCTTACCTCGACCAAATGTCTGACCTCCCAGCAATGGACAATAACGATGAAGAAATGTCAAAACCTAACTTAACAGCCAGGACATTACTGGATGCTGCCGAGAGAGTGCTCATGGCAGAAGGGGGCAAACTGCATGTTAAAGATTTAGAAGAAAAGATGGTGGAATATGGACTTATACCACAAAgcgCAAAATCTCTAGCTAATCTGGAGTCCATCCTTTATAGAGAAACGTTCAGTGAGAATTCAAAGTTCAAAAGAATTGAAGGTCGTTTGGGATGGTTTGCTCTCGTGGGTGTTGAAGTTGATGATATAGAATCTGATGGAAGCTCTTCAGGAGAGGACCAGTCAGAGAGCATGGATAGCCACAGTATCAACACACCACCAAGACCAAAGGCTGTTAAACCAACCAGTCACCATGACTACAAGAACAAGTACTACACATTAAGGAAAATGGTCAAAGAACTTGTATTTTTAAATGCTGCTGGAAGTGATGACATTACAAGGACAGAAGCTAAATTGACAAGAGCTAAAGCAGAAAGAAAGTTCCTGTTGAAAAGGCTGTTTCAGTACCAAGCTGCTGCTGAGGCAGGTGTCATACAGCCCCATGGTATAAGTGCCTTACCTCCAGAAGTTCCTGCACCAATAATGTTCCCTGACGTCCCCTTAGACAAACACAAACATCAAACAAAAGTGAAAGTCAAAAAATCGTTAACAAAAGggaaagaagagaagggaaataGTGTGAAGGGGATTGGACAACATTTGAAGTCTAAAAATGCACTACAGATGAAGCTGACCCAGGCCAAACTGGCTGCACAAGCAAGAAACCAAGCAAAGATAGCAGGACAACAGAAAGTGTCAGTGAACACTAAGTCTACAGCAAGTCAGAATAAATCTCCTTCACAAAACAAGGCAAAAGCAGCCGAAAAAGAACAAGCACCAGTTAAAACAGTTACACAAGCCAAGCAAGATGTACAAACTAAACCTGTACAGCCACAGAAGACTGATATACAGTTAACAGAAGTTCCTCCCATATCTGGATCTAAGGAGAAAAAAGCTGACAAACCAAAGACCTCCAGACCAAAAGCTAAGAAACCAAAATTGTCTGAAAGTCCACAAGCCACACCTGTTGCTACTAACCCACCACAAGCTGGTGAAACAACAAAACCAAAGCGAAAGAAGCCAGGTACAGCAATCAAGAGAAAAGTACAACCTATCCCAGTAGATGCTAAAGGGAAACCTATATTCCCTATAGTGTTGGGTGGACTCACAGTCCACAGTCTCGGTGAGATAGTGTGGGACAGGCCTGGATTTCACTCAGAGCGGTACATATGGCCCGTAGGGTACTGTAGTTCAAGAACTTACCCAAGCATAACAGATCCTGAGAAAAAGTGTCTCTACACCTGCAAGATTCTAGATGGGGGCTTTGGACCACAGTTTGAGATGTGTCCAGAAGATGATGCCGAGCACCCCATCAATGCATCATCTGCTACAGCATGTCACTGTGTTGTACTAAAAACCCTTAATAAAGCCAGAGGACGTGATGCTTCTAATACTGGATCAGGGCCAGAGTTTTTTGGTTACTCACATCCCACTATCCAGTATCTCATCCAAAACCTGCCAGGGGCTAAGAAATGTAATAAGTACCAATGGGTGAAGTTTGAACTACCAAAACCTCAAAGCAAGCAAGGTGGTAAGCTGACATCTGCCTGCAGCCTGTCCGTGGATAATCAAGACAATCAGTTGTCTCCACTCAGAGAACACAGGCATTCCTCGTCCAGCCAGGAAGGGTTGGGACTGGGTGATGATAGCACGCCCATGGACCAAGGGGACAGTAATCTAACCTTACAGTCAACTGCTAtagatgatgctgatgataataTCTTCGAAGATATGGGTTCATTGATGTCGTCACCAACAAGCAATAATTTCTCTTCATCGCTGCCAATCACGTTGTCCCCGCCCTCTCTGACGTCACCGTCGTCCACAGCAACAGGGAATGGCTCTTTCGTCATACCTCTAACATCGCCCTTATTTGGTAGCAGTTCGGGATTTTCGTCATCTGTGCTCCCTGATTTACCGAAATAG

Transcript

ENSKFPT00000036845

agatggcggctttGTTTTGGGCCAAAATGTCGACTTTCTGCTCTCATTTTCCCCTGTATTCGTATTAAATATGGACAAACCAACCACACAGTTGTCTACATCAATATCTCCTAGTGCTTTGGATTcgttttctttgtcttcagGGAATCAAGGAGAGATCCCAGAGTCATCTTTGTTTCCTTACCTCGACCAAATGTCTGACCTCCCAGCAATGGACAATAACGATGAAGAAATGTCAAAACCTAACTTAACAGCCAGGACATTACTGGATGCTGCCGAGAGAGTGCTCATGGCAGAAGGGGGCAAACTGCATGTTAAAGATTTAGAAGAAAAGATGGTGGAATATGGACTTATACCACAAAgcgCAAAATCTCTAGCTAATCTGGAGTCCATCCTTTATAGAGAAACGTTCAGTGAGAATTCAAAGTTCAAAAGAATTGAAGGTCGTTTGGGATGGTTTGCTCTCGTGGGTGTTGAAGTTGATGATATAGAATCTGATGGAAGCTCTTCAGGAGAGGACCAGTCAGAGAGCATGGATAGCCACAGTATCAACACACCACCAAGACCAAAGGCTGTTAAACCAACCAGTCACCATGACTACAAGAACAAGTACTACACATTAAGGAAAATGGTCAAAGAACTTGTATTTTTAAATGCTGCTGGAAGTGATGACATTACAAGGACAGAAGCTAAATTGACAAGAGCTAAAGCAGAAAGAAAGTTCCTGTTGAAAAGGCTGTTTCAGTACCAAGCTGCTGCTGAGGCAGGTGTCATACAGCCCCATGGTATAAGTGCCTTACCTCCAGAAGTTCCTGCACCAATAATGTTCCCTGACGTCCCCTTAGACAAACACAAACATCAAACAAAAGTGAAAGTCAAAAAATCGTTAACAAAAGggaaagaagagaagggaaataGTGTGAAGGGGATTGGACAACATTTGAAGTCTAAAAATGCACTACAGATGAAGCTGACCCAGGCCAAACTGGCTGCACAAGCAAGAAACCAAGCAAAGATAGCAGGACAACAGAAAGTGTCAGTGAACACTAAGTCTACAGCAAGTCAGAATAAATCTCCTTCACAAAACAAGGCAAAAGCAGCCGAAAAAGAACAAGCACCAGTTAAAACAGTTACACAAGCCAAGCAAGATGTACAAACTAAACCTGTACAGCCACAGAAGACTGATATACAGTTAACAGAAGTTCCTCCCATATCTGGATCTAAGGAGAAAAAAGCTGACAAACCAAAGACCTCCAGACCAAAAGCTAAGAAACCAAAATTGTCTGAAAGTCCACAAGCCACACCTGTTGCTACTAACCCACCACAAGCTGGTGAAACAACAAAACCAAAGCGAAAGAAGCCAGGTACAGCAATCAAGAGAAAAGTACAACCTATCCCAGTAGATGCTAAAGGGAAACCTATATTCCCTATAGTGTTGGGTGGACTCACAGTCCACAGTCTCGGTGAGATAGTGTGGGACAGGCCTGGATTTCACTCAGAGCGGTACATATGGCCCGTAGGGTACTGTAGTTCAAGAACTTACCCAAGCATAACAGATCCTGAGAAAAAGTGTCTCTACACCTGCAAGATTCTAGATGGGGGCTTTGGACCACAGTTTGAGATGTGTCCAGAAGATGATGCCGAGCACCCCATCAATGCATCATCTGCTACAGCATGTCACTGTGTTGTACTAAAAACCCTTAATAAAGCCAGAGGACGTGATGCTTCTAATACTGGATCAGGGCCAGAGTTTTTTGGTTACTCACATCCCACTATCCAGTATCTCATCCAAAACCTGCCAGGGGCTAAGAAATGTAATAAGTACCAATGGGTGAAGTTTGAACTACCAAAACCTCAAAGCAAGCAAGGTGGTAAGCTGACATCTGCCTGCAGCCTGTCCGTGGATAATCAAGACAATCAGTTGTCTCCACTCAGAGAACACAGGCATTCCTCGTCCAGCCAGGAAGGGTTGGGACTGGGTGATGATAGCACGCCCATGGACCAAGGGGACAGTAATCTAACCTTACAGTCAACTGCTAtagatgatgctgatgataataTCTTCGAAGATATGGGTTCATTGATGTCGTCACCAACAAGCAATAATTTCTCTTCATCGCTGCCAATCACGTTGTCCCCGCCCTCTCTGACGTCACCGTCGTCCACAGCAACAGGGAATGGCTCTTTCGTCATACCTCTAACATCGCCCTTATTTGGTAGCAGTTCGGGATTTTCGTCATCTGTGCTCCCTGATTTACCGAAATAGAAGTAATATGATTGAGGCTGATATGCAAAATAGTGGTTTACCGAGTCATTACCGAGCGCTTCTCAGTAGTGGTTTGGAATTCTAGGCATGTGTCCCAAGACTTCCAAAATAGAATGAATGAGAATGGCTAGCTGTAAGTTAGAAATCCAAACGCTAGTCGGGAGTAGTTCGAAATTCTTGTTGTCGATTTTCCTGGTTTACGTATGGTAACCGAATAGTAACCGAGCACCGCCCGAAGTATTTGACGCCACAATTTCAGTGAATATAAAGTGGTCTTGAAaccggggggga

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3YBR2	Transforming growth factor beta regulator 1 OS=Homo sapiens OX=9606 GN=TBRG1 PE=1 SV=1
Q5PQK8	Transforming growth factor beta regulator 1 OS=Rattus norvegicus OX=10116 GN=Tbrg1 PE=2 SV=2
Q66IH2	Transforming growth factor beta regulator 1 OS=Xenopus tropicalis OX=8364 GN=tbrg1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003987 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05066 all species →	HARE-HTH	HB1, ASXL, restriction endonuclease HTH domain	Family	Interproscan
PF05965 all species →	FYRC	F/Y rich C-terminus	Family	Interproscan
PF05964 all species →	FYRN	F/Y-rich N-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007759 all species →	Domain	ASXL, HARE-HTH domain	Interproscan
IPR040092 all species →	Family	Transforming growth factor beta regulator 1	Interproscan
IPR003889 all species →	Conserved_site	FY-rich, C-terminal	Interproscan
IPR003888 all species →	Conserved_site	FY-rich, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22715 all species →	TRANSFORMING GROWTH FACTOR BETA REGULATED GENE 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0051726 all species →	Biological Process	regulation of cell cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000033983.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.