Gene detail

Detailed information of ENSKFPP00000034112.1 in Condylactis gigantea

Genomic Location: not available for this species
NR annotation: XP_031565450.1, transportin-1-like [Actinia tenebrosa]
Species abbreviation CGIGA · all data for this species · gene families

Sequence

CDS

ENSKFPT00000036979

atggcgtgGCAACCTGATCAAGACGGACTCCAGCAAATAATACTCCTACTAAAGGAAAGCCAAAGCCCTAATACAGAAACCCAACGGGCAGTGCAACAAAAACTTGAATCTCTTAACCAATTCCCCGATTTTAATAACTATCTTATTTTCGTGCTTACGAAACTCAAGAGCGAAGACGAACCAACACGGTCACTCTCTggattgattttaaagaataaCGTACGGTCTCATTATCACACTTTTCCGAACGAAGTTCGAGAGTTTATTAAATCGGAATGTCTGCAAGCTATTGGAGATCCTTCGCCATTGATTCGAGCTACAATAGGCATACTAATAACAACTATAGCTGCTAAAGGCGATCTAACAAACTGGCAGCAGCTTCTCCCAACGTTATGCCAGATGCTGGACAGCGAGGATTATAATGTCTGTGAGGGTGCATTTGGAGCTCTACAGAAGATCTGCGAGGACTCTGCTGACCAGTTGGACAGTGATGCTCTCAATCGGCCATTAAATATCCTTATCCCAaaattcttgaatttcttccgTCATGCTAGTCCAAAGATCAGGTCCCATGCCATTGCTTGTGTCAATCAGTTCATTGTCAACAGAACACAAGCTCTAATGATGCACATCAGCACATTCATAGAGAACCTTTTCGCTCTTGCTGGAGATGAAGACTCAGAAGTCCGAAAAAACGTCTGCCGTGCTTTAGTGATGTTACTAGAAGTCCGAGCAGACCAACTAATACCACATATGAACAATATTGTGGAGTACATGTTGCTGAGAACTCAAGACAAAGATGAAAGTGTTGCACTAGAAGCTTGTGAATTCTGGCTTACACTAGCAGAACAACCCATTTGTGTGGAAGCACTGTCTGCACATTTACACAGaCTTGTTCCCATCCTTGTTAATGGAATGAAGTACTCTGAAATTGACTTAATATTATTAaagGCAGACCAAGAAGATGATGAGGCTGTGCCAGACAGCGAACAAGACATTAAACCAAGATTCCATAAATCCAAGACACATTCACAGCAGCATGAAGAAGCAGAGGCtggaagtgatgatgatgacatggatGATGATGCCTTATCAGACTGGAATCTGAGAAAATGTTCTGCGGCTGCCCTGGATGTCCTGGCCAACGTGTTCAGAGATGATTTACTCCCTGTCCTGTTACCAATACTCAAGGAAATCCTATTTCATCCTGACTGGGAATCAAAAGAATCTGGTATTCTTGTACTGGGTGCCATTGCTGAAGGCTGTTTGAATGGCATTGCACCTCATCTATCAGAGCTAGTACCATTCTTGATTAACTCCCTTTCTGAGAAAAAGGCACTGGTTCGATCCATAACCTGCTGGACACTGAGTCGGTATGCCCACTGGGTAGTCAACCAACCACATGAAGCATACTTACAGAAGCTGATGACAGAGTTGTTGAAAAGAATTCTGGACAGCAATAAAAGAGTCCAAGAAGCTGCCTGCAGTGCCTTTGCCACACTAGAGGAAGAAGCTTGCACAGAACTTGTCCCCTACCTTGGATTTATTCTGGAAACATTGGTGTATGCCTTCAACAAATATCAGCACAAGAACCTCCTTATTCTGTACGATGCCATTGGTACTCTAGCAGACTCTGTCGGCCACCATCTAAACAAACCGGAATACATCACAATGCTAATGCCGCCTCTCATCCAGAAATGGAACCAGCTCAAGGATGAAGACAAGGATCTTTTTCCATTGTTAGAGTGTTTGTCATCTGTAGCCACTGCCTTGAGGTCCGGCTTCCTTCCCTATGCTGGACCTGTGTTCCAGAGATGTGTTTCTCTGGTTGAGAAAACCTTGACTCAGAGTTTGGTATCACAGGCACAGCCAGACCAGTTTGAACCTCCAGATAAAGACTTCATGATTGTTGCACTGGACTTGTTAAGTGGACTGGCTGAGGGCCTGGAAGGACAGATAGAACAGTTTGTCATACGGAGTAACATTATGACCTTGCTGTTCCAATGTATGCAGGACAAGATGCCTGAAGTCAGACAGAGTTCGTTTGCCCTCCTTGGAGACTTAACTAAAGCATGTTTTGTTCATGTCAAACCCTGTCTAGCTGACTACATGCCTATCCTTGGACAAAACCTTAACCCAGATTTCATCTCAGTATGTAATAACGCTACCTGGGCTATTGGTGAAATATCTGTGCAACTTGGTGCTGAAATGGAGCCGTACATTCCCCTGGTACTAAGTCAGCTGATTGAGATCATCAACAGACCTCACACTCCCAAGACCCTCCTTGAAAACACAGGTGTACCTCGCTGCGAAACATTCGTGACAATGAAGAAAAAGACTCGGCATTCCGTGGTATCTGTAGTTTGA

Transcript

ENSKFPT00000036979

GTCGAGCGAACAGCaagcaaaaatcaaaatggcgtgGCAACCTGATCAAGACGGACTCCAGCAAATAATACTCCTACTAAAGGAAAGCCAAAGCCCTAATACAGAAACCCAACGGGCAGTGCAACAAAAACTTGAATCTCTTAACCAATTCCCCGATTTTAATAACTATCTTATTTTCGTGCTTACGAAACTCAAGAGCGAAGACGAACCAACACGGTCACTCTCTggattgattttaaagaataaCGTACGGTCTCATTATCACACTTTTCCGAACGAAGTTCGAGAGTTTATTAAATCGGAATGTCTGCAAGCTATTGGAGATCCTTCGCCATTGATTCGAGCTACAATAGGCATACTAATAACAACTATAGCTGCTAAAGGCGATCTAACAAACTGGCAGCAGCTTCTCCCAACGTTATGCCAGATGCTGGACAGCGAGGATTATAATGTCTGTGAGGGTGCATTTGGAGCTCTACAGAAGATCTGCGAGGACTCTGCTGACCAGTTGGACAGTGATGCTCTCAATCGGCCATTAAATATCCTTATCCCAaaattcttgaatttcttccgTCATGCTAGTCCAAAGATCAGGTCCCATGCCATTGCTTGTGTCAATCAGTTCATTGTCAACAGAACACAAGCTCTAATGATGCACATCAGCACATTCATAGAGAACCTTTTCGCTCTTGCTGGAGATGAAGACTCAGAAGTCCGAAAAAACGTCTGCCGTGCTTTAGTGATGTTACTAGAAGTCCGAGCAGACCAACTAATACCACATATGAACAATATTGTGGAGTACATGTTGCTGAGAACTCAAGACAAAGATGAAAGTGTTGCACTAGAAGCTTGTGAATTCTGGCTTACACTAGCAGAACAACCCATTTGTGTGGAAGCACTGTCTGCACATTTACACAGaCTTGTTCCCATCCTTGTTAATGGAATGAAGTACTCTGAAATTGACTTAATATTATTAaagGCAGACCAAGAAGATGATGAGGCTGTGCCAGACAGCGAACAAGACATTAAACCAAGATTCCATAAATCCAAGACACATTCACAGCAGCATGAAGAAGCAGAGGCtggaagtgatgatgatgacatggatGATGATGCCTTATCAGACTGGAATCTGAGAAAATGTTCTGCGGCTGCCCTGGATGTCCTGGCCAACGTGTTCAGAGATGATTTACTCCCTGTCCTGTTACCAATACTCAAGGAAATCCTATTTCATCCTGACTGGGAATCAAAAGAATCTGGTATTCTTGTACTGGGTGCCATTGCTGAAGGCTGTTTGAATGGCATTGCACCTCATCTATCAGAGCTAGTACCATTCTTGATTAACTCCCTTTCTGAGAAAAAGGCACTGGTTCGATCCATAACCTGCTGGACACTGAGTCGGTATGCCCACTGGGTAGTCAACCAACCACATGAAGCATACTTACAGAAGCTGATGACAGAGTTGTTGAAAAGAATTCTGGACAGCAATAAAAGAGTCCAAGAAGCTGCCTGCAGTGCCTTTGCCACACTAGAGGAAGAAGCTTGCACAGAACTTGTCCCCTACCTTGGATTTATTCTGGAAACATTGGTGTATGCCTTCAACAAATATCAGCACAAGAACCTCCTTATTCTGTACGATGCCATTGGTACTCTAGCAGACTCTGTCGGCCACCATCTAAACAAACCGGAATACATCACAATGCTAATGCCGCCTCTCATCCAGAAATGGAACCAGCTCAAGGATGAAGACAAGGATCTTTTTCCATTGTTAGAGTGTTTGTCATCTGTAGCCACTGCCTTGAGGTCCGGCTTCCTTCCCTATGCTGGACCTGTGTTCCAGAGATGTGTTTCTCTGGTTGAGAAAACCTTGACTCAGAGTTTGGTATCACAGGCACAGCCAGACCAGTTTGAACCTCCAGATAAAGACTTCATGATTGTTGCACTGGACTTGTTAAGTGGACTGGCTGAGGGCCTGGAAGGACAGATAGAACAGTTTGTCATACGGAGTAACATTATGACCTTGCTGTTCCAATGTATGCAGGACAAGATGCCTGAAGTCAGACAGAGTTCGTTTGCCCTCCTTGGAGACTTAACTAAAGCATGTTTTGTTCATGTCAAACCCTGTCTAGCTGACTACATGCCTATCCTTGGACAAAACCTTAACCCAGATTTCATCTCAGTATGTAATAACGCTACCTGGGCTATTGGTGAAATATCTGTGCAACTTGGTGCTGAAATGGAGCCGTACATTCCCCTGGTACTAAGTCAGCTGATTGAGATCATCAACAGACCTCACACTCCCAAGACCCTCCTTGAAAACACAGGTGTACCTCGCTGCGAAACATTCGTGACAATGAAGAAAAAGACTCGGCATTCCGTGGTATCTGTAGTTTGATAAGTGCGAACCCAGGAGGAGTTGTGCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8BFY9	Transportin-1 OS=Mus musculus OX=10090 GN=Tnpo1 PE=1 SV=2
Q3SYU7	Transportin-1 OS=Bos taurus OX=9913 GN=TNPO1 PE=1 SV=2
Q92973	Transportin-1 OS=Homo sapiens OX=9606 GN=TNPO1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004086 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03810 all species →	IBN_N	Importin-beta N-terminal domain	Repeat	Interproscan
PF02985 all species →	HEAT	HEAT repeat	Repeat	Interproscan
PF13513 all species →	HEAT_EZ	HEAT-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001494 all species →	Domain	Importin-beta, N-terminal domain	Interproscan
IPR000357 all species →	Repeat	HEAT repeat	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR040122 all species →	Family	Importin beta family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10527 all species →	IMPORTIN BETA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0008139 all species →	Molecular Function	nuclear localization sequence binding	Interproscan
GO:0061608 all species →	Molecular Function	nuclear import signal receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKFPP00000034112.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.