Gene detail

Detailed information of ENSKFPP00000035194.1 in Condylactis gigantea

Genomic Location: :...
NR annotation: XP_031556819.1, protein HGV2-like isoform X4 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKFPT00000038153

CACGAACTGAAGAAACATGGCCGCCGAGACACAGGATGCTACTGCTTCAAGCTCCACTTTCGAAGAAGATATTAAAAAATTGATGGGTAAAGGCAAAGTTCATTTGGTTTGTAACGAGAATTTGGAAGCTGTCAAATGCTTCGAAGAAGCGACGAAAAAACTaGACGAGAAATATGGACAAGACTTGGCGAATGAATGCGGAGAAGCTTATTACTATTATGGGAAGTCTCTACTGGAAGTAGCAAGgATGGAAGGTGGCGTATTGGGAAATGCCTTACAAGAAGCAATTGAAGTCCAAGaaaatggtgatggtgaaccAAGTACAGACCAGAAATCTGTTGAGgacaaaaaagacaaaaatgaaaagactactgaagatgaagaaaagaaagataaaaactTTTACGAAACTAAAGAAGCAGAAAAAAGCTCAACAGagaaaaaggatgaaaaagcTGAAGAAAGCAAAtcggaagaaaaagaaggatcctcagaagagaaaaaggatggagaagaaaaagaagaaaatgcaaaAGTGAAGGGAGCAGAAAAAAGTGCTAcagagaaaaaagatgaaaaaacagaagaaataaaagcatcctcagaagagaaaaaggatggagaagaaaaagaagaatctgCAAAAGTGAAAGAAGCAGAAACAACCACAAcagagaaaaaagatgaaaaaccaGATGAAAGTAaatcagaagaaaaagaaggatcCTCAGAGGAGAAAAAGGAGGGAGAGGCAAAAGAGGATGAGGGAGGTGAAGAAGAGGGTGGTGATGCTGAGCCTATGGATGAGGAAGGGGCTGAGAATGCTGAAGCTGAGCAAACTGAAGAGGATGAACCAACATACATGGAGCTAGCATGGCAAATGCTTGAAGGTGCAAGATTGATATTCACAAAgagagaaggaaaggaagcaaAGCTGATGCTTGCACAGTGTCATCTTAAACTTGGAGAAATTCAAATGGAACAAGAGCAATTCTTAAGTGCAATAGAAGATTTTCTCAAGTGCTTGGACATTCAAAAAGAACATCTGGAACCAGACAACAGATTAAAAGCAGAAACAGCATATAATATTGGTCTAGCTTTCTCATTCCAGTCCATGTATGATAAATCAAAAGAGTACTATGGCCAAGCCCTGCAGACCATTGACCTTAGGATCAAAAATCTACAGAATAGCATTGAGGAAGCTGAATCCAAGAGTAAAGGCAAAGAAAAGGCCACTGATGATAATCCATTTGTGGCAAATAGAAAGGAATTGCAAGAGTTACAAGAATTGTACCCTGAAATTAAAGCCAAGGTTGATGATGCAAgtgaaatgatgaaacaggCTGGAAAAAAACCCGATATGAGTTCAATAATGgGTAATGGAAGTTCGACAAGTATTGGTTTTGGACACACCTGTGATAAGGATGCACCAGTTACCATGATTGCAACCAAGAAGTCACCTGCAGCAGCGTCAGACATCTCCCATCTGGTGCACCGTAATAAGAGGAAACAAGAAGAGGCTAGTAATTGCGACACAGTTGCCAAAAAGCCACGACAAGATGACGAGAATACAGAAGCCAATGGTAAACCAAATGAAACTACTGGCAGCAAGACTGAAACAACCATGGAAGCAACTTCAGCGGAGAGTTAAAGCAATACTCTTCCACTAATGTATATAGAAATCTATAAAGTACTGGGATCATGCATTGTTCTCTCCAATAACATAACTTTTGTATCTTATATTCGTTTAAAAAGTGGAACTATTATTCATGATTGTGTGTAAACACTGAAGTTAGCGATGACTTAACAAttaattcaaaagaaatctAATAAAATTCACGACACTTTGTTGAAGCATAGAGAATAACTTCGATGGAAATGCAAGAGCAGTTGCTCCCAATACCGTCGTTTCGAATAAGAACTATCTCTTGCTGAGCTTGCTGCAAAGTTTTTTAAGCCAAGTCAGATTTTGAAAATCTCGAAATCAATTTTTTGCATACAAAACTTTTACGTGAAAC

Protein

Uniprot

Uniprot term	Description
Q02508	Protein HGV2 OS=Halocynthia roretzi OX=7729 GN=HGV2 PE=2 SV=1
Q66HD3	Nuclear autoantigenic sperm protein OS=Rattus norvegicus OX=10116 GN=Nasp PE=1 SV=1
Q99MD9	Nuclear autoantigenic sperm protein OS=Mus musculus OX=10090 GN=Nasp PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10516	SHNi-TPR	SHNi-TPR	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019544	Domain	Tetratricopeptide, SHNi-TPR domain	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR051730	Family	Nuclear Autoantigenic Sperm-associated Protein	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15081	NUCLEAR AUTOANTIGENIC SPERM PROTEIN NASP -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0006335	Biological Process	DNA replication-dependent chromatin assembly	Interproscan
GO:0034080	Biological Process	CENP-A containing chromatin assembly	Interproscan
GO:0042393	Molecular Function	histone binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11291	NASP; nuclear autoantigenic sperm protein	-	Chromosome and associated proteins	ko03036	deepkoala