Gene detail

Detailed information of ENSKKQP00000001074.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029213963.2, 28S ribosomal protein S9, mitochondrial-like [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000001369

TCATCCGCTGATAAATAATACTTCGCGGGCGCTTCTCAAGATTTCAATATGGCGTCCGGATTTTGGCCTAGAGCGGGGGCTTTTACCTTCTCATACTTTATTGCACGAAACACAAGGGTAACCACCATGTCTATGAAACACTTGTGGAAGTATCAGATGTCGAATGCTATTAATTTGGTTTCACAAGAGCGTTTTTATATTAGTGAAAAACGGGAAAGGTTTGAGAATATAGGAAGTGATGGTACCACAGGGACTGGTAATGTAAGCTCTGAATCAAGTCAAGGCCAAGATGAAGATGATCCTGTAATGCAAGATCTGATAGTTAAATATGAACGATATAGACTCTGGTTAGCAAAAATCATGGGGAAAGATCCTGAGAATTTCACAGATAAAGAAATTAAGGAAACCATTGAGTACTTGATGCCATCTGGATTGTATGCTAAAGATGCTCGACCTCTGTTTGAGGACCCCAAGAGACTGTATAAGAAACAAGCTGAACTTGTGGATAAGAATAGTCGCCCTCTACATGCAGCCTTCTTCACTGGCCAAATTGGTTTCCATGACTTATTATTTGAAATTTATGAACAAAATGCAATATTGGATACTGATGAAAACCCAGGAACCAGCAAGGAGTCAGAGGCCAGAAAATATGGGGGATACACTCCAGATGGAAGCCAAGGGTCCAATTTGGTTTCAAGCAAGCAGTGGGTAATAGAAACTGAACATGATGTATATGCAAGCAGCGAATCAGAATCCAGCTCAGATGCAAAATCTAGCTCTGACTCTGATCAGGAATCAACAAACGACTCTATGCCTGATTTAGGGTGGGATGAGAATTCAGGGAAAATTCCAGCCAATGATAGACTGCTTACACAGGACACCAAGGAAACTGAGAGTGGTAAGTCGGCAACGAAACCGAAGATGCGATGGATTGGCAAACTGGagatggaaaagaaaatagGCGAAAGATTGACCGACAAAGAGTATGATGTCATCACTCACAGGCTCAAGAAACTAGCGAGTCGCCCAAACGCATCAAGAGTGACTCcttttcttcttcaatttcttcacgtTATCGCCATTCAGGGAATGCGAGCAGTGGAAAGGAAGTTAAACGATAAAGGGGAAGCTGTTGCGGTTGGGCATCGCAAACGTGCAATCGCAGAAGTCGTGATGAAGAAAGGATCCGGAAGTGTAACTGTTAATAATACTCCAATGGCCAAGTACTTCGGCAGAGTGGAAGATAGGAAACAAATTATGTATCCTTTTCTTACTGTTGGAGCAGTTGGTGAATATGATGTGGATTGTGGCGTCATAGGTGGCGGAACATCAGGTCAGGCGGGAGCTATCAGGCTTGCCTTGAGCAGAGCATTGCTGAACTTTGAAGACAGTTACTTGGAACCTCTTCAAGAAGCCGGCTTGTTGATAAGGGATCCTCGCATTAAGGAGAGGAAGAAACCTGGGCAAAAGAGAGCAAGGAAGAAGTTTGCTTGGGTGCGAAGATGACGCTTTTTGCTGAGTCAGCGGGCTTAAAAGAGTGAGTTTTTCCACTTGACGGTCCCATAAGCTCTTGGGCAGACAAAAGCTTGGGAATTTTATCAGAAAGATGCATTTAACTTTTGAATAAGGTCACATCTGGacgaaaacgaaagaaaaaaacgaagTGGTTCCTTATTAGCGAAAGAAGAAGTGTAATAGTTGTCCTAACATCATAAACCCCAGTCGAGCAAGGAAATTGTATGGAATTCTCAAGAAAGAGGCTGCTGTAAAAGGAGAATGAAATTCACGAATGGGAGTAAAATACAATTCCAAATATGTCTAATGTCTTCTCTTTCTGTTACATTTTTGTAGAAGATTTgcctttattttttgtttgttattattattattattattattactatttttttaatttggaatAACAAATTGAATGGcgtgttttttaatttttaaactgAAATGTAACGGCAAATCATTTACTACTCCCTGATAAAGTTAGGCCGTACTTTAATTAAAAAGGATTGGAAAGGTATTGAAATATTCCTCACAGCCGTCTATCCAGCTTTGCCCAATTATTTCCCTTTATTTTACTTCAGATATTCGCTGGTGAGATCCGGCAAGGTCCGGCACGTTTGTTTCGTCCAAGTGGCCTTTGCCCAAGAAATTGTTAACAGCCCAATGATTTCTGTAGTCAAAATGCAGGTTCAGCCAAATATTGATCAATAAGAGTGGGCCAAACTGAACCATGACTCTTTTCACTCAGCTGGATCCAAGTAAACAGCTCGGTGTACTCGTAGGCATATATGGTATTCTGATTCCAGATAATACCGCAGGCTGAAGGTCTGCATTCCATTGCGGATCGGGAGATCTGGGTCGTGATCTTCTAGTGGTTTGATTACAGCACGCATCCACAACCAACCACATCCTCTCTGGCGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q58DQ5	Small ribosomal subunit protein uS9m OS=Bos taurus OX=9913 GN=MRPS9 PE=1 SV=3
Q9D7N3	Small ribosomal subunit protein uS9m OS=Mus musculus OX=10090 GN=Mrps9 PE=1 SV=3
P82933	Small ribosomal subunit protein uS9m OS=Homo sapiens OX=9606 GN=MRPS9 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004062 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00380 all species →	Ribosomal_S9	Ribosomal protein S9/S16	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR000754 all species →	Family	Small ribosomal subunit protein uS9	Interproscan
IPR020574 all species →	Conserved_site	Small ribosomal subunit protein uS9, conserved site	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21569 all species →	RIBOSOMAL PROTEIN S9	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005763 all species →	Cellular Component	mitochondrial small ribosomal subunit	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02996	RP-S9, MRPS9, rpsI; small subunit ribosomal protein S9	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.