Gene detail

Detailed information of ENSKKQP00000001876.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029214018.1, LOW QUALITY PROTEIN: 60S ribosomal protein L13a-like [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P40429	Large ribosomal subunit protein uL13 OS=Homo sapiens OX=9606 GN=RPL13A PE=1 SV=2
Q4R8Z2	Large ribosomal subunit protein uL13 OS=Macaca fascicularis OX=9541 GN=RPL13A PE=2 SV=3
G1TVS8	Large ribosomal subunit protein uL13 OS=Oryctolagus cuniculus OX=9986 GN=RPL13A PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006724 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00572 all species →	Ribosomal_L13	Ribosomal protein L13	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005822 all species →	Family	Large ribosomal subunit protein uL13	Interproscan
IPR036899 all species →	Homologous_superfamily	Large ribosomal subunit protein uL13 superfamily	Interproscan
IPR005755 all species →	Family	Large ribosomal subunit protein uL13, eukaryotic/archaeal	Interproscan
IPR023563 all species →	Conserved_site	Large ribosomal subunit protein uL13, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11545 all species →	RIBOSOMAL PROTEIN L13	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0017148 all species →	Biological Process	negative regulation of translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02872	RP-L13Ae, RPL13A; large subunit ribosomal protein L13Ae	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.