Gene detail

Detailed information of ENSKKQP00000002325.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_029196600.1, E3 ubiquitin-protein ligase MARCHF3-like [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P22845	Histone H1.0-A OS=Xenopus laevis OX=8355 GN=h1-0-a PE=2 SV=3
Q5NVN9	Histone H1.0 OS=Pongo abelii OX=9601 GN=H1-0 PE=2 SV=3
P43278	Histone H1.0 OS=Rattus norvegicus OX=10116 GN=H1-0 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00538	Linker_histone	linker histone H1 and H5 family	Domain	Interproscan
PF12906	RINGv	RING-variant domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR005818	Domain	Linker histone H1/H5, domain H15	Interproscan
IPR011016	Domain	Zinc finger, RING-CH-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR005819	Family	Linker histone H1/H5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46065	E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000786	Cellular Component	nucleosome	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006334	Biological Process	nucleosome assembly	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0030527	Molecular Function	structural constituent of chromatin	Interproscan