Gene detail

Detailed information of ENSKKQP00000005006.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_015774843.1, PREDICTED: uncharacterized protein LOC107353039 isoform X1 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKKQT00000005686

ATGCTTTACAAATCCCACAAtgatcttccaaaagctatccAGTGTTATGAAAAGGCTTTGAACATTGCACGGGAAGCAGGCGATCGGACTACAGAAGGAAACGCCTATTTGAATCTTGGGATAGTTTACGATTCCCGCAgcgattttccaaaagctatcgactGTTTTGAAAAGGCTTCCAaaattgccagggaagcaggccaTCGGACtacagaaggaaaagcctatttgAACCTTGGGATACTTTACAATTCCTACAGCGATCTTCCGAAAGCTATGGAGTGTGTCGAAAAGGCTTTGCACAATGCCAGGGAAGCTGGCGACCGGGCTATAGAAGGAAAGGCCTATTTGCTTCTTGGGATACTTTACAATTCCTACAGCGATCTTCCGAAAGCTATGGAGTGTGTTGAAAAGGCTTTGAACAATGCCAGGGAAGCCGGCGACCGGGCTACAGAAGGAAAGGCCTATTTGGTTCTTGGGATACTTTACACCCGCCACAAtgatcttccaaaagctatcgagtgttatgaaaagacttcgaacattgccagggaagcaggcgatcGGACTATAGAATCGGTGACCTGTTTGATGCTTGGCGTACTTTACCATTCACGCAGCGATCTTCCAAACGCTATCGAGTATTACGAAAAGGCTTTGAACATTGCCAGGAAATCAGCCGACCGGGATGGAGTAATCCGTGCCAATCAGTATCTCGAGGGTTGTTACTTGGCCCTTGGCGATTTTTTGAAAGAGTATCGTGAAAAGACTTTGATATTCTACGGAGTGGGTACTTACACTGAGGAGTCAACGCAGGGACCAGTTGAAAGCAATAACATCCCTGAGGATCACCAAGGGCTGTCCACTGCAATCATTCATGATCAAGTTGGCTCAGCTGCAGGAATCGAAACAGAAGATTATGCAGGTTCTTCAAAGTCATCAAGTGATGCACACGTCGGTGGTGGCAGTCGAGTCTCTCAAACCACAGAGAATTCTCCAGCACCGATGAAAGCCAAAGATAACACTATTTCCTCGGGAATGATACCTAAGGAGATAGAAATGTTGATTAAGAAACTACGCGATAAAGTAGACAAGTTGCATAGTGAGGATGACATCTATTCAGTTCTGTGGGATTTCGCGGGACAATCAGTTTACTATGAAACCCATCAACTCTTTCTGACGCCAAAGGCAATCTACCTTTTGGTTTATGACCTAAGCTGGGATCCTGAGGGGTTTGCAGAGCCCGCTAAAAACCAAGGATGCTTCGAGAAAATTGAAGAGAAATCGTGCACGAAAACTAACCTCGACTATCTAGACTACTGGATGACTTCAGTTTCTTCACAATCCAGTCGAAGTGAAAATCACGATTTGTGCTCAGCTTCGACATCCACAATTATGCCAAAGACACTTCCTCCTGTCTTCTTGGTTTGCACCCATTCTGATAAAACTTTTGGCGGAAAAGATCCTTCTGAACTAGCCCTTAAAGTATACggtttcttgaaaacaaaatcatatGGCGAACAGCTGTTCCATAGTGTTTTTAAAGTGGATAATACTAAATCAGGTGGGCAAAACGAATGTCCAGAAGTGAAGCGCTTGAGAGAAAGCATTTTAGCTGTTGCCATGGAGCTACCACAAACCAAAGAGAATATTCCGATCAAGTGGTTGAAGTATGAAGAAGCGCTCCAGGGCGTATTGGATGAGGGTCATAAGTGGATCACTATTGAGGACGCCAAACAGATCGCGTCTGAAGTCTGCCAAATTCATGACGATCAAGAGTTTGTAACAGTGCTTGACTTTTTGCATGATCAGAgaattttaatacattttgATGAAACTgttgaactcaacaaattggtTGTGTTGGATCCTCAATGGTTGATCGATGTGTTCAAGGCAGTAATAACTGTTAAGCGTTATGACCAGCAAGAAAGTGGATTGAACGATTTGTGGTTTAAGCTAGAAAGAGAAGGAATCCTGGAAGAAAAACTCCTCCATCATGCGTGGAGCCAAATTGTCGGAGGACATCACACTTTTGAAAGCCTCATCTCAATCATGGAGAGGTTCAGCTTGCTGTGTTCTTGGCCCTCGTCAAATGAGCTAGGTAGTAAGGAGTATCTTGTGCCGTCCATGTTGAGGTGGTATCCACCACAGGAGATCACCAAGTTAATTACCTCGGCAAGTCTCCCCTCGCTATTCGTCAAGTTTAAATCTGGTCAAGTGCCTTCAAATCTGTTTCCACGACTTGTTGTTCAGTTCCTTCAGTGGGGGAGAAATGAATTTTGGAGCACAGTGAAGCTGTATAAGAATTTCGCCAGATTTTACACCGCTGACGACGAAAACTATTCAGTGGTACTCTTATGCCACTCCTCCTTGATTGAAGTCGTTGTTCATGAAGGGAACGTTCGTTCGCTGAATGATGACTTGCAGGCAGATTTAGGCAACGCGACTGTAGATCAACGCGATTCATTTGAAGTGTTCTGTGCTCGTGAAGTTTTCAGACAGCTCGTGTTGTTGCTTGGGTGCTTGCGAAGAGAGTTTTGCTGGTTGAAGAGAATGGAATATCAAGTCGGGATCATTTGTCCGGTTTGTTGCCAAAAAATGCTAGTAGACTATTGCGACACTCATCACAAGAAAGATTGTGAGCAGGAAGAATGTCTTCATTTCATACCTGAATCGGAGCTGCGCAATTCAAATCAGCATGTCATTTGCACCAGGTCGGCTGTTGCAGTAGATAACAAAGTTTACAGCAAGGATTTTACAGCGTGGTTTGGCAATCCACGTGAAGAGGTAACTTACACCTTACTGTGTTTTTCCCAAAAGATTTCTTGTTTCCTTTTGTAA

Transcript

ENSKKQT00000005686

Protein

Uniprot

Uniprot term	Description
Q1ZXD6	Probable serine/threonine-protein kinase roco5 OS=Dictyostelium discoideum OX=44689 GN=roco5 PE=3 SV=1
Q55E58	Probable serine/threonine-protein kinase pats1 OS=Dictyostelium discoideum OX=44689 GN=pats1 PE=3 SV=1
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13176	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR006597	Repeat	Sel1-like repeat	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K19683	TTC30, DYF1; tetratricopeptide repeat protein 30	-	Cilium and associated proteins	ko03037	deepkoala