Gene detail

Detailed information of ENSKKQP00000009421.1 in Acropora austera

Genomic Location: chr11:4623428...4641491
NR annotation: XP_044164590.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114970783 [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSKKQT00000011094

ATGGGAATGCAAGATGGTGGCCAGTGCGCATCTGGGCCGCGCGCTTTCAAAACGTTTGCCAAATATGGACGATCGAACCGATGCAGAGGTGGTAAAGGAGGACCTTGGGCGAACGATGTCTACAGGATAATAGGGCGATGTGGTCAGCGTACATGGAAAGGAAACTGCTGTGTGTTTCCGTTTGTTTATCGCGGGCGCAGATACAATTCTTGTACCCGCCGTGGAAGCAAACGATTTTGGTGTCCAATCGTCCCAGGCTACAAGCCAGGCCAAGCATGGGGATATTGTCGAGGGAAGCAAGTGACCGTACCAGCTTTCTGTAAACTTCCAAAAGTCACCGGTCCCTGTCGAGCCGCTTTCCGCAGATGGTACTTTAACAAAGTCACTAGGAAATGCCAGCTGTTTACATATGGAGGTTGCCGAGGAAACAGAAATAACTTCAAGACTCGAAAAGAGTGTGAAAGGAAGTGCGGCCGGTCTTCGACCAAAAGAGTTACCGACGGACTTTACAtccGGCCCATCGGGTGCTTCAAGGACACGGGTCGCCGCGCCATCCCGCAGATGGATGGTCGGGACATTCTTATCCGGGACTTCTACCGACGCAGAAAAGACGCCATTAATAAGTGCGCATTGGTAGCAGGAAAGTTGGGCTACAAAGTCTTCTCTGTACAGCACCAAGGATGGTGTGCAACGGGTCCCAAAGCTCATCTGACCTATGCAAAATACGGGCCCTCAAACGTATGTCGAAACGGAAAGGGAGGTCCTTGGGCAAATGATGTCTATCGCGTCGTAGGGAGATGTCGAGTAAGGACAACATCACGTTACTGCTGCGCGTTCCCGTTCATCTACAAAGGCCGCCGTTATAACAGCTGCACAAGAAGAAACAGTAAACGCCCTTGGTGCGCCCTGACACCTAACTACGATCGAGACCGGAAATGGGGCTACTGCTATCTTCGCAAACCCGTCAGACCTGTCCGACCAGTTATCCCTCCGACAAGAGGGCGCGTGATTCAAGTTACCACTGGCCTCAAAGCACGGGGCATCGGCTGTTTCAGAGATACTAGCCGTCGAGCCATCGCTACAATGGAAGGCAGAAGTCGTCTTCTTAAGGGCCCTTACAATCGCAGACGAGACGCGATCAGGAAATGCGCTTCTGCGGCGTACAAACGAGGATACAGGGTGTTCGCTTTGCAGAATGGCGGTTGGTGCGCGTCGTCGCGCTACGCTTTTAGAACGTACGCCAGATATGGTAGAGCAAGGAATTGTAAAAATGGCAAAGGCGGGCCGTGGGCTAACGATGTGTACTTCCTTAAAgGTTCTTGTCGCACACGAACCACAAGGGGTGATTGCTGTGTGTTCCCCTTCGTCTACCGCAATAGAAGATACTACAGACCTACCAGGATTAATGCAAAGCGGCCTTGGTGTTCCTTAACTTCGAATTACGACAAAGATAAACTGTTTGGATATACGGGAGGACGAACGCCTGTTCGGCCGATTAGAATCACCCCAACAATAAAACTTCTAAGGATCGGTTGTTTCCGAGATACTTCGCGCCGAGCTATTCCTCAGCTGGACCAGAGGAGTCGGCTATTGCGAGGAAATTACCAGCGTCGGAAAGACGCCATTGCAAAATGCGCTGCCGAAGCCATTAAGCGCGGTTACCGAGTCATAGGagtccaaaatggcggctggtGTGCATCGGGACCGCGGGCTCAATTTACCTTTGGAAAGTATGGACGGTCCAACAGGTGCAGGAATGGCAAAGGCGGAGGCTGGGCAAATGATGTCTATCGAGTTGTAGGTAAATGTGGACTTCGCACCAGAGAAGGATACTGCTGTGTACCGTTTACGTATCGCGGGCGCCGTTATAATGGTTGCGCAAGAAATCGCCGTGGAAAGCGATGGTGTGCCATTGCACCGAACTTCAGGCAAAACAAACTGTGGGGGTACTGCAGGGGAAGAACACGACcgAAATTAATAACTCCTGGAGCTATGTATAAATACACTGGTTGCTATCGTGACTCCAAACCACGAGCCATTCCAGGGAAAGACGGCAAAGATGTCCTGATTCGAGACTACTATCGAAGGCGAGTTGACGCCGTCTCCAAATGCGCTCTTGTGGCGCTAAGGTTTGGTTTCCGAGTCTTTGCTGTGCAGCACCAGGGATGGTGCGCTACTGGACCCAGGGCCCATCGGACATATTACAAATACGGACGATCCAATCGTTGCAGGAACGGCAAAGGAGGACCGTCGGCAAATGACGTCTATACTATTTACGgATCTTGTCGAACACGAACAGCCTCAGGGCATTGTTGTGTGTTTCCCTTCATTTACAAGGGCCGTCGCTATCGAAGCTGTACTAAGAAGAACAGTAGAAGGCCTTGGTGTGCGAAAACATCCAACTATGACCGAGACAGGAAATGGGGATACTGCTCCAGACGACCCATCAAGCCAATAAGGCCCATCAGGCCCATCAGGCCCATCAGGCCCATCAAACCAGTCAGACCTGTAAGACCGATCAGACCTCTTCCACCGGTTAGACCACCCCCCAGACCAAGACTACCCTCTGGAAGTGTCGCCTATATCCCTGTTACCGCTGACATCGCCTTCCTGATCGACGGCTCTCGCTATGTTAGTCGACGAAACTTCCATCTTGAGAAGGTTTTTATCAAGTCGATCGCCCGGCGGTTCACGATCGCCAAGCACCAGTCACACATTGGTGTCGCCACTTACGGAAGCCGACCACACTTGTGCATGCGCTTCAACCAGTACAAATCTCTTGGCTTGGTGCTCCGAGCGTTGAATTACATCCGGTATCGGAACCAAAACGGAAGACGCGTTGATCTGGGAATGAAAGCGGCGCTGAGCTATTTCTTCAACAGGaggaataaatattattttgttgagAGGATTCTTGTTGTAGTCGTGAGTGGAAGACAAACCCGCTGGTCCTATTATCTCATGAGGCGACTTCGCACGCAGTTCGCAAAACTCGGCGTTAAAGTTTACGTCGTCGGAGTTGGTCGCATCGATTACAAATACCTTCGTCCAATCACTTACAAGAACAGACACATGTATACTGTGCGCTCCTACAGAAGCCTGGTTACTAGAGCCGGTCAAATAGCAAGGGCCATCCACATTGAAATGCGAATTAAACGCGATAAATATCGAGATATGCTCGCCCGGCTCAACAATCGTCGTGATCACGGCTCCAACAGAAGCGAAGAAGGCTGGGAACAAGTCACGGATACCAGTACGGATCCATCCCATCAAACAGAACCGGAAGATGAAGCTACTTTCGTCAAACCCCACGAAGCATTTGGGGGACCACCAGTCAACAGTACCGGGGAAAACTGGGAACAAGGCAAACAGACGTCTAAGAGCAGCAATGAGTTTGAGTCAGAATATCAGGGAAGCATTGTTCCGCCCCAGGAATCAAATGGTCCGCAGTCAAATAGTCCCGAGGACAATATggaacaaaacaacaactccaCGGTGACTGACGTTCCTGAACAAATCAATGGAACGGAATCGGGGAGTGACGTTAGTGCTACTAGTTTCCAGGAATCTAAAAGTCAGTCGGCAAGCGGCACTGAGGAGGACCCGGGACGAAACATGAATTCCACGGTGACCGATGTTCCTGAACAAGCCGGTCCAACAGAACCGGAAAGTGACGCCAGTGCTGCTAGTTCCCAGACATATATAAGTCAGCGGCCAAACACTGCCGTGGAGGACCCGGGACGAAACATCAACTCCACTATGACTGAATcagaaaatgacgtcactgttTCCACTCCCAACGAATCTGAAGGCTCACAGTTGAACAGCACCGAGGTAAACATGGGTCCCAATATCAGCAACACGTCATCGGTCGACGCTCCCGAACAAGGCAACGAAGCAGGATCGGTCGATATCGCTTCTCCAGCAACAAATCCCCCTGAAATGGTTGATCAACGCCCTGGCTTGCAACAGAAGAGAAACGATACTATGAAGGAATTAGCGGATCGACGTAATGGAACAGATCTTGAAGACATCGGGAACCTTGTCAAAATACACCAAATAGATGGTCAGGGCCCTAACGGCACCGTGGAAGACTGGGGACGAAACGGCACTACCATGAATAACTTATTTGATCAGCGCAACGGA

Transcript

ENSKKQT00000011094

ATGCGCTTTGGTTGCCAAAAAGCGTGGCTATGGAGTAATGGGAATGCAAGATGGTGGCCAGTGCGCATCTGGGCCGCGCGCTTTCAAAACGTTTGCCAAATATGGACGATCGAACCGATGCAGAGGTGGTAAAGGAGGACCTTGGGCGAACGATGTCTACAGGATAATAGGGCGATGTGGTCAGCGTACATGGAAAGGAAACTGCTGTGTGTTTCCGTTTGTTTATCGCGGGCGCAGATACAATTCTTGTACCCGCCGTGGAAGCAAACGATTTTGGTGTCCAATCGTCCCAGGCTACAAGCCAGGCCAAGCATGGGGATATTGTCGAGGGAAGCAAGTGACCGTACCAGCTTTCTGTAAACTTCCAAAAGTCACCGGTCCCTGTCGAGCCGCTTTCCGCAGATGGTACTTTAACAAAGTCACTAGGAAATGCCAGCTGTTTACATATGGAGGTTGCCGAGGAAACAGAAATAACTTCAAGACTCGAAAAGAGTGTGAAAGGAAGTGCGGCCGGTCTTCGACCAAAAGAGTTACCGACGGACTTTACAtccGGCCCATCGGGTGCTTCAAGGACACGGGTCGCCGCGCCATCCCGCAGATGGATGGTCGGGACATTCTTATCCGGGACTTCTACCGACGCAGAAAAGACGCCATTAATAAGTGCGCATTGGTAGCAGGAAAGTTGGGCTACAAAGTCTTCTCTGTACAGCACCAAGGATGGTGTGCAACGGGTCCCAAAGCTCATCTGACCTATGCAAAATACGGGCCCTCAAACGTATGTCGAAACGGAAAGGGAGGTCCTTGGGCAAATGATGTCTATCGCGTCGTAGGGAGATGTCGAGTAAGGACAACATCACGTTACTGCTGCGCGTTCCCGTTCATCTACAAAGGCCGCCGTTATAACAGCTGCACAAGAAGAAACAGTAAACGCCCTTGGTGCGCCCTGACACCTAACTACGATCGAGACCGGAAATGGGGCTACTGCTATCTTCGCAAACCCGTCAGACCTGTCCGACCAGTTATCCCTCCGACAAGAGGGCGCGTGATTCAAGTTACCACTGGCCTCAAAGCACGGGGCATCGGCTGTTTCAGAGATACTAGCCGTCGAGCCATCGCTACAATGGAAGGCAGAAGTCGTCTTCTTAAGGGCCCTTACAATCGCAGACGAGACGCGATCAGGAAATGCGCTTCTGCGGCGTACAAACGAGGATACAGGGTGTTCGCTTTGCAGAATGGCGGTTGGTGCGCGTCGTCGCGCTACGCTTTTAGAACGTACGCCAGATATGGTAGAGCAAGGAATTGTAAAAATGGCAAAGGCGGGCCGTGGGCTAACGATGTGTACTTCCTTAAAgGTTCTTGTCGCACACGAACCACAAGGGGTGATTGCTGTGTGTTCCCCTTCGTCTACCGCAATAGAAGATACTACAGACCTACCAGGATTAATGCAAAGCGGCCTTGGTGTTCCTTAACTTCGAATTACGACAAAGATAAACTGTTTGGATATACGGGAGGACGAACGCCTGTTCGGCCGATTAGAATCACCCCAACAATAAAACTTCTAAGGATCGGTTGTTTCCGAGATACTTCGCGCCGAGCTATTCCTCAGCTGGACCAGAGGAGTCGGCTATTGCGAGGAAATTACCAGCGTCGGAAAGACGCCATTGCAAAATGCGCTGCCGAAGCCATTAAGCGCGGTTACCGAGTCATAGGagtccaaaatggcggctggtGTGCATCGGGACCGCGGGCTCAATTTACCTTTGGAAAGTATGGACGGTCCAACAGGTGCAGGAATGGCAAAGGCGGAGGCTGGGCAAATGATGTCTATCGAGTTGTAGGTAAATGTGGACTTCGCACCAGAGAAGGATACTGCTGTGTACCGTTTACGTATCGCGGGCGCCGTTATAATGGTTGCGCAAGAAATCGCCGTGGAAAGCGATGGTGTGCCATTGCACCGAACTTCAGGCAAAACAAACTGTGGGGGTACTGCAGGGGAAGAACACGACcgAAATTAATAACTCCTGGAGCTATGTATAAATACACTGGTTGCTATCGTGACTCCAAACCACGAGCCATTCCAGGGAAAGACGGCAAAGATGTCCTGATTCGAGACTACTATCGAAGGCGAGTTGACGCCGTCTCCAAATGCGCTCTTGTGGCGCTAAGGTTTGGTTTCCGAGTCTTTGCTGTGCAGCACCAGGGATGGTGCGCTACTGGACCCAGGGCCCATCGGACATATTACAAATACGGACGATCCAATCGTTGCAGGAACGGCAAAGGAGGACCGTCGGCAAATGACGTCTATACTATTTACGgATCTTGTCGAACACGAACAGCCTCAGGGCATTGTTGTGTGTTTCCCTTCATTTACAAGGGCCGTCGCTATCGAAGCTGTACTAAGAAGAACAGTAGAAGGCCTTGGTGTGCGAAAACATCCAACTATGACCGAGACAGGAAATGGGGATACTGCTCCAGACGACCCATCAAGCCAATAAGGCCCATCAGGCCCATCAGGCCCATCAGGCCCATCAAACCAGTCAGACCTGTAAGACCGATCAGACCTCTTCCACCGGTTAGACCACCCCCCAGACCAAGACTACCCTCTGGAAGTGTCGCCTATATCCCTGTTACCGCTGACATCGCCTTCCTGATCGACGGCTCTCGCTATGTTAGTCGACGAAACTTCCATCTTGAGAAGGTTTTTATCAAGTCGATCGCCCGGCGGTTCACGATCGCCAAGCACCAGTCACACATTGGTGTCGCCACTTACGGAAGCCGACCACACTTGTGCATGCGCTTCAACCAGTACAAATCTCTTGGCTTGGTGCTCCGAGCGTTGAATTACATCCGGTATCGGAACCAAAACGGAAGACGCGTTGATCTGGGAATGAAAGCGGCGCTGAGCTATTTCTTCAACAGGaggaataaatattattttgttgagAGGATTCTTGTTGTAGTCGTGAGTGGAAGACAAACCCGCTGGTCCTATTATCTCATGAGGCGACTTCGCACGCAGTTCGCAAAACTCGGCGTTAAAGTTTACGTCGTCGGAGTTGGTCGCATCGATTACAAATACCTTCGTCCAATCACTTACAAGAACAGACACATGTATACTGTGCGCTCCTACAGAAGCCTGGTTACTAGAGCCGGTCAAATAGCAAGGGCCATCCACATTGAAATGCGAATTAAACGCGATAAATATCGAGATATGCTCGCCCGGCTCAACAATCGTCGTGATCACGGCTCCAACAGAAGCGAAGAAGGCTGGGAACAAGTCACGGATACCAGTACGGATCCATCCCATCAAACAGAACCGGAAGATGAAGCTACTTTCGTCAAACCCCACGAAGCATTTGGGGGACCACCAGTCAACAGTACCGGGGAAAACTGGGAACAAGGCAAACAGACGTCTAAGAGCAGCAATGAGTTTGAGTCAGAATATCAGGGAAGCATTGTTCCGCCCCAGGAATCAAATGGTCCGCAGTCAAATAGTCCCGAGGACAATATggaacaaaacaacaactccaCGGTGACTGACGTTCCTGAACAAATCAATGGAACGGAATCGGGGAGTGACGTTAGTGCTACTAGTTTCCAGGAATCTAAAAGTCAGTCGGCAAGCGGCACTGAGGAGGACCCGGGACGAAACATGAATTCCACGGTGACCGATGTTCCTGAACAAGCCGGTCCAACAGAACCGGAAAGTGACGCCAGTGCTGCTAGTTCCCAGACATATATAAGTCAGCGGCCAAACACTGCCGTGGAGGACCCGGGACGAAACATCAACTCCACTATGACTGAATcagaaaatgacgtcactgttTCCACTCCCAACGAATCTGAAGGCTCACAGTTGAACAGCACCGAGGTAAACATGGGTCCCAATATCAGCAACACGTCATCGGTCGACGCTCCCGAACAAGGCAACGAAGCAGGATCGGTCGATATCGCTTCTCCAGCAACAAATCCCCCTGAAATGGTTGATCAACGCCCTGGCTTGCAACAGAAGAGAAACGATACTATGAAGGAATTAGCGGATCGACGTAATGGAACAGATCTTGAAGACATCGGGAACCTTGTCAAAATACACCAAATAGATGGTCAGGGCCCTAACGGCACCGTGGAAGACTGGGGACGAAACGGCACTACCATGAATAACTTATTTGATCAGCGCAACGGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P0DN10	U-actitoxin-Avd3i OS=Anemonia viridis OX=51769 PE=3 SV=1
P0DN14	U-actitoxin-Avd3m OS=Anemonia viridis OX=51769 PE=3 SV=1
P0DN09	U-actitoxin-Avd3h OS=Anemonia viridis OX=51769 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007785 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00040 all species →	fn2	Fibronectin type II domain	Domain	Interproscan
PF00014 all species →	Kunitz_BPTI	Kunitz/Bovine pancreatic trypsin inhibitor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR013806 all species →	Homologous_superfamily	Kringle-like fold	Interproscan
IPR000562 all species →	Domain	Fibronectin type II domain	Interproscan
IPR036880 all species →	Homologous_superfamily	Pancreatic trypsin inhibitor Kunitz domain superfamily	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR002223 all species →	Domain	Pancreatic trypsin inhibitor Kunitz domain	Interproscan
IPR020901 all species →	Conserved_site	Proteinase inhibitor I2, Kunitz, conserved site	Interproscan
IPR051666 all species →	Family	Seminal Plasma Capacitation Regulator	Interproscan
IPR036943 all species →	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22918 all species →	SEMINAL PLASMA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004867 all species →	Molecular Function	serine-type endopeptidase inhibitor activity	Interproscan
GO:0008201 all species →	Molecular Function	heparin binding	Interproscan
GO:0009986 all species →	Cellular Component	cell surface	Interproscan
GO:0048240 all species →	Biological Process	sperm capacitation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05216	P2RX2; P2X purinoceptor 2	-	Ion channels	ko04040	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Acropora austera tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Acropora austera, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →