Gene detail

Detailed information of ENSKKQP00000010038.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029189484.2, LOW QUALITY PROTEIN: trichohyalin-like [Acropora millepora]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000011733

caGGTGAGCAGGCACGTTCGTTATTTATTAGATCCAAACTCCCTTTGCCGGAGCTTAGCAAAATCTGGAAACTTGCAGACATTTCAAGAAACAACATGCTGGACATTGATGAATTTGCAGTTGCAATGCATCTCATCCAGAGTCGTTTAAAGGGCAAAAACATTCCTGAGAAATTACCAGAAACACTCACTCCTGTTAATTCACCAACTGTTGATGTTCCTGCCATGTTGCAAGAAGAGAGGGAGGCTTATGGGAGAGCTTTCTCATGGAAAAGCGATTCCAAGATTGGATGTGTAGATGGTCAAACAGCATGTTACATCCTCATTGGATCTGGTCTTTCAGAGAATATATTAGCAAGAATTTGGAACATTTCTGACATTGACCGAGATGGGAAACTCTCTCAAGATGAATTTTTTGTGGCCCTTCATCTGACAAGATTTTGTAAGCAAGGAAACTCAATAGAAGGGTCTGTGAATGTAAGAACGATTCTATTGCAACAGATTAAAGAAGATTGCTATGATACAAAGAAGCTCAGACTAGCAGAGGTTCAGACAGAAAAGCGAAAACTCCTCTCTCTAAAAGAGAAGCTTTGTCATGAAATAGCTGGTGGCTTAGATGAAGAATTAATGGCACAAAAAGTCCAAGACGAACTAGACCAAGTCAATAGACAAATATATCTTTTAGAGAAAGACGAAATTGAACTGCGACGGGCCCTACAGCAATTGAAGGACAAGTCAAAGAGAGAAAGCTTCAAGCCATTCGATCGCAGTTTCCTGTTAAAGCGACATCCGAGTGGCGGAGATATCTTCCGAGGCGCACGTCGGTTATACGAGGAAACAATTGCGGACCTCTGGGACGTTGAAATACAGAAATTATGGAAGGAAGATGGTGATTTAAGCGACTTCGGAACGGCAATATCAGAAGATCTTAAAGCGCCAGATGAATCAGAGAAGAACGACGAAGACCAATCGGTTAGAGCACTCATCAGTTCAAGCAGTCAAGCCCAAGAGTTGTCGCACACAGTAGCGATGTCATCAACTGTTTCTTTAGACATAAACGGCAATAGTGATGAGACCAAACCAAGGATGTCGAGTTCTGTTGACAAGCAAGAAAGTAACGACAATGGCAGTTTCGACCAGTATCGAAGAAGAGCAACGGATGAACAGCACGAATCACGGATTAGCGACGATGTCGACAAGgaaaattcaaatacAGGCAAACTCCTTAAAGCGAAAAGCTTATGTGATTTGTCTACGAAAAAAGACAGGAAAAAGGACGATTTGAATTCGCACCCGATGCTAAATAAGCCCTTATCCAATCGTTCAGCTGATTCGGTTGATGGCGGCTTCCCGTCATTTTCGGATTCGAGAATTCAAAGAGAACTTGAGGAACAACGCATGCGTGAAGCTATCGTGAAGCAGGAGATCAAAGAAAGAGAGCGGTGGTATCGACaggaagaggaaaaaaagaCGACTTCGGAACCACCCGTGACGGGCAAGAAGGAAGTGAGCTTGCGTGACATCAAAAGAAACCCGTTGCCCAATAAAATTCAGGTAAAAAAGCCCAACCATTCATCAACAAATCGAGAGTCTGTCACTCAATCCATGGCGGCTCAATGGGAAACAAAGTTGCAATCTATCCCTGATGGAAGTGACGCAAAGGACAAAGCAgatcaaaggaaaaaaagtgtGATTGAGATAGAGAGAGAAGAAGAAAGGCGAAGAGAAGAGGAACTTCAGATGGAGAGAGAAAGGCTATTTTTGGAACGTAAgcaaaaagaagaagagaacAGGTTTTTGTTACAGAAAAAACGTGAacaggaaaacgaaaaaaagagaaaagaaaaagaggaaaaggtTGCGTCAGCAACGAACCACAGCTATGAAATCGTTATTCGAGAAAATGGGAGGAAAGCAATAAGAGGGAATTGCATCCACCATCGTGGCGTTCTGCGGCATCAAGTAGTTCGAGGTTGACAATAAGTTCCAATGTTAAACAGCTTTACACCGCAGCCAGATATTACTATGGATTCATCAGTGTGTACATTTGACATATTTGTATAATTTTTTGCGTGCTTTAGCTGATACGTGCTTTGAGTAAAGAATATTAAAAATGCGAAAATTTGATATTCCATGGGttcataagggtcaaattacca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O42287	Intersectin-1 OS=Xenopus laevis OX=8355 GN=itsn1 PE=1 SV=2
Q9WVE9	Intersectin-1 OS=Rattus norvegicus OX=10116 GN=Itsn1 PE=1 SV=2
Q9Z0R4	Intersectin-1 OS=Mus musculus OX=10090 GN=Itsn1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005926 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12763 all species →	EF-hand_4	Cytoskeletal-regulatory complex EF hand	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan
IPR000261 all species →	Domain	EH domain	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11216 all species →	EH DOMAIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0042734 all species →	Cellular Component	presynaptic membrane	Interproscan
GO:0060090 all species →	Molecular Function	molecular adaptor activity	Interproscan
GO:0097708 all species →	Cellular Component	intracellular vesicle	Interproscan
GO:0150007 all species →	Biological Process	clathrin-dependent synaptic vesicle endocytosis	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000010038.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.