Gene detail

Detailed information of ENSKKQP00000010683.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015752703.1, PREDICTED: acid sphingomyelinase-like phosphodiesterase 3a [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000012391

TACGGGAGATCGGGAGATTCGTTCCGCATACGGGAGACTCACGGATAATCCGGGCATGATTGAAATGAGGAAGGGCTGAGGCGGACCCCTGAGATGTTGTTGTGAAGTACGCGGAATTTTGAGGGTAGATTAAGTTGAAACCATCAGTGACAAAAATTAATTTACATAGAGCAATTAAGGTGGAAATTGCAAGGGCCATGGAATACACCAAGAACCAAGAACACTTAGACACTGGTAAAACCAAATATAAGATatccagaaagaaaaaattacaagaaagaTGCTTGATTGGAGTTCTGACAATCATTTGTTGTACTTTAATTGTAATTCTAATTGTAACTTTCAAAAGTGGACACCACCCTATCTCACAAAATTGCTTGATCAAAGAGAATGAAAGAGTCTTCAAGAACAATACTATCAAGTTTATTCACTGGTCGGATATCCATTATGATCCATTTTATAATGAGACTGTTCCAAGCAAGTTCTTTTGTAGACAACAGGTAGTTCTGGAATCTGCAAACTATCTTGCTCCATATGGAAGGATAGGTTGTGACTCACCTCTAAATCTCCTTGAAAATACATTGAATGCAATGAAGAATATCACAGAAGATGAAGAAATCAAGTTTATGTTGTTGACAGGGGACCTTTCAGGCCATCGCATGTGGACAAATTTTTCTGGGGCAGATAAAGTGTTGGACAACATTGCTATTGTCAGTCGCAAGATACACTCCACATTTCCAAAGATTCCTGTATTTCCAGTGATCGGCAACAATGACCTTCCAGGACATTATCTTTTGCCAAACTTAACCAGTGACTGGTACAAGAAGCTTTTGACTTTCTGGAGCCCACTAATTTTGTGTTCTGGGTGCCCTGGATATACAAGAAACCTCATAAGGGAAAGAGTTTTACAGGAGACTTTCCTGGAAGGTGGATACTATAATACAAGCATTGCAGATGGTAAAATTGTTGTGTTGGCCTTAAACAGTCTCTACTGGTCTGTAGCCGTTGAACGAAGTGTAGAAACAGATAGAAAAGCTTTGAAGCAATTAGTTTGGCTGGAAGAGCAATTAATGCTTGCTAGAGACCATGGACAGAAGGCAATTCTAATCAGTCACATCCCAGCAGGAGTGGACACTTATTCTGAAAAGGCATATTGGTTCAGTAACTACACAGATGTCTATGTGACAATTGTTGCCAGAAACTATAGTAACCTTATAATTGGTCAGTTTTTTGCTCACACGCACAAAGATGATTATCGTCTCCATACATTTTCATCAAACACCAGTTTTAGCCAGCATGATCCACTTATGTCATTTCTGCTCTTGGCTCCTGCCATTTCACCTGTTTACCACAACAATCCAGCATTCAGGATGTTGTCTCTTGATGTAGAAAAATTGTCTTTGATAGATTTCACCCAATACTTCATGGATCTTGTCATGGCCACAGAATTCTCCAACCCTGTATGGCAACTAGATTACACATTCAGTGAGAAGTATAAATCAAGCAACACTTTTATTGATGCAGAAAGAATAAATGAACTGAACCAGCAATTACTGAACCAAACAAGTAACAAATTTTGGAAAGGTTATGTCTTTTCAAGAGAGACAAACTATCAGCCAATGAAATATAACAGGTTTACTCTGTATTGTGCCATGAGATTtgtacattttcaaagtttccaaCAATGTAGAAAGAAATACAATGTACCCGGTGGGTAAACTTGagcagaaaataaataaaactcaaCATTTTGGTGTCATCATGGTTGGATTGTCAAGGTAAATGGGAAGGAAACTGTAATGTGAGAcaagaagaaacagaaaaagatGGTAACCCAATTTAATGACAAATTTGTaagaaaaatgcattttctgGTATGGAATATTGTCTTTATAAGAATAGTTTTTCATTCACCCAGTGGTTGAATTTGCCAGTGCATTTGCATAAGACTGCTACAGGGAAACAAATTTGACATGATGACACCAAAAATGtcagtttttcttgttattttttttcttgtatctGTGCATGATAGTTAATAGCCTTGAAATTTACATGACCCAtacttctgtttttttctttttttttcctgtgtttttgcccagaaaagaaaaaatttttaCCAGAAGTCACtgtatttttattaaaaaaagcattttaaagATGCATGTACTATTGAATATTTTTTACCCTTACAAATGTCAATAATTGTGTATAAGCTAACGAAAGAATGTTTGATCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q54C16	Sphingomyelin phosphodiesterase B OS=Dictyostelium discoideum OX=44689 GN=sgmB PE=3 SV=1
Q0VD19	Sphingomyelin phosphodiesterase OS=Bos taurus OX=9913 GN=SMPD1 PE=2 SV=1
Q04519	Sphingomyelin phosphodiesterase OS=Mus musculus OX=10090 GN=Smpd1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001711 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19272 all species →	ASMase_C	Acid sphingomyelin phosphodiesterase C-terminal region	Family	Interproscan
PF00149 all species →	Metallophos	Calcineurin-like phosphoesterase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045473 all species →	Domain	Sphingomyelin phosphodiesterase, C-terminal domain	Interproscan
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR004843 all species →	Domain	Calcineurin-like phosphoesterase domain, ApaH type	Interproscan
IPR041805 all species →	Domain	Acid sphingomyelinase/endopolyphosphatase, metallophosphatase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10340 all species →	SPHINGOMYELIN PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008081 all species →	Molecular Function	phosphoric diester hydrolase activity	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01128	SMPDL3; sphingomyelin phosphodiesterase acid-like 3	EC:3.1.4.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.