Gene detail

Detailed information of ENSKKQP00000012086.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_020608090.1, macrophage mannose receptor 1-like isoform X1 [Orbicella faveolata]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000013863

AAATTATTAACACTGTTAGTAACATAGGCATTGCCAAAGTGGGTGTTTTGTTAGGAAATACCTTTTaactaaaaatataaaaaaaacgtGTCCACGTATCCCGCCTGCAAAGAATTATTGGCGAGAAAATATGTGATAAGTATATTTAAAGGAGATCCAACAGGATTACGGTTCATTTCCAACGAATGACACGAAGAAGACCTCTTGAAAAGATGATGCTCCGAAAATATGCACAAGGCATTGTTTTTGCAATTCTGGTAATATTGCACTTCGGTTTGCCACAAGAGCACGCTGGATTTTTTTTCCATAATGGTGAATACTCGTACAAGATTGTGCTTTCCAGTGACGATAGTAGAACGTGGTATGAGGCCGAGGAGATTTGTCGAGAGTACGAGGGTGGGCATTTGGCTAGCGTAACAGACGAGGACGAGAATGCGTTCGTAAATGAAAAGATTCAGTTACTGAGTCGGTCGGCCTCTGATTATCAGCAAGTGTGGATCGGAGCTAAAGACGAACAGAAGTATGGAAAAGCTTATCGATCTTATCAATGGGCAGACGGGCATGTCTTTAGATACGAGGCGGCTTTCTGGGCTCCTGGTGAACCAAGCAATGGGTACCGCAATGAATATGATATCTGCATCGCTCTGAAGTCTTCCGGAGATCTGGCAGATTGGATTGATGCTGATTGCTATGAGCCAAAGGGTTATGTCTGCAAAATTGAAGGTTTCCCCAAAAGACTCATAGAAACCAAGAAGTTTGGTTATGAGTTCGACAGTGGGCGCAATATTTACAAGTTTGTGATATCACAGCAGGACATGCTCACGTGGCCTGAGGCTGAAATCTACTGTAGTAAAGTGGAGGGTGGTCACCTAGTCAGCATAAAAAATGCAAGAGAGAGTAAATACATAGAAAGACGTTTGCGCATGCTCAGATATTACTTTGGATTCTCGAAACTCTGGATAGGAGCCTCGGATCTTTATAACGAGGGTACTTTTAACTGGACTGATGGTAAGCCTGTTGCTTACCAGCGCTGGGTGCGCGGGGAGCCCTCAGGAGGCGGCAGGGGCAGAGAGGAGGACTGTGCCGTAATGACCGCTGACCCACACTGGGCAAGATGGAAAGATGAATACTGCTTGCATCATTTGCCTTTTATTTGCAAAGTTAAAGTTTGCAAACGTCGCGCGGACATTGGTTTTATTGTGGATTCCTCTAGAAGTGTCAGAATCAATGGGTTCCGAAAATCTAAGGAATTCATCAAAAATGTTGTGCGTCGCTTTAAAATCTCCAGCGAAGGAACTCACGTGGGATTGATACGCTTCTCAACTCAAGCAACAAAGATCTTCGGCTTCGAGGAATACTTCAGTCAAAGTGAGGTAGAAGACGCTATTGACAAAATGACTTATCGAAGAGGGGGAACTAACACTGAAAAAGCTTTAAAAGTGGCAAGAAACGATTTATTCCTCGAAAAGCCGGAGGGTACATCTCGTCCTAATATCCCCAGATTCGTGGTTCTGTTGACTGATGGAATGTCACTTGATCCTAAAGAAACAATCAAGGAGGCAGAGTTATTAAAGCAAAAAGGAGTTTTCATCACGGTTGTGGCAGTCGGGCTATCAGTTAACAAGAGAGAGCTCATAAACATTGCGTCGTCTCCTCGGAATGTTATCACTGTCCGTTCATTTGCATATCTGAAAAAAATTGTGCTTGTTACAAAACAGAAGGTTTGCGAAGATTGAGCCGGAGAATAAGGCAACTATTCAAGTCAGGCAAAGGACGCTGCAACATGGAAGATGGcagatttctttatttgtaGTCAATTTACCACAGCCAGTTTGTATGTAAAACAACAAGTTTTGTTAAGATGAGTATAAAATAAGTGAGTAGGTTAATCCAAAGTTGCTTTTCACTTCAATCAGCCATTTTTCATTTATACGAGACGATAAAACCATCTCTtctttaaaggcttttaaagtTGACAGTGAAGCCATCTAGTGAAAATGGCGTTTCAATTAAGATGTCCCCTCCTTACTATAAACACTGACTCGTACTCAAGACTAAATATTAAGCTGAAAGTAAAGAAAGTGTATGAGCATTTTACCCTTAGGTAATTCATAGTTCAATTACATATATGTATACATATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P22897	Macrophage mannose receptor 1 OS=Homo sapiens OX=9606 GN=MRC1 PE=1 SV=1
Q61830	Macrophage mannose receptor 1 OS=Mus musculus OX=10090 GN=Mrc1 PE=1 SV=2
A6NMZ7	Collagen alpha-6(VI) chain OS=Homo sapiens OX=9606 GN=COL6A6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002496 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00059 all species →	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050111 all species →	Family	C-type lectin and snaclec domain-containing protein	Interproscan
IPR018378 all species →	Conserved_site	C-type lectin, conserved site	Interproscan
IPR001304 all species →	Domain	C-type lectin-like	Interproscan
IPR016186 all species →	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR016187 all species →	Homologous_superfamily	C-type lectin fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803 all species →	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0038023 all species →	Molecular Function	signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000012086.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.