Gene detail

Detailed information of ENSKKQP00000013495.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_015752777.1, PREDICTED: sodium/potassium/calcium exchanger 3-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKKQT00000015432

TACGGAAAAAGATCTTGCACTATATGTCTTCAAATTATAATGAGGAATCGCAAGAAGGTGTTTTAGATGATGAACGTAGTTGACGAGAAGGAACGTAAGGTGTGAGTAGATCGCGAAGCATCAGTTATGATACGAAGAAGACGATTCAAGTTTCAACTGGGATTCGTAGCTCTTTCAGTGCTCTGCTTCTTCAGTTGCCGCCGAGACGATGCAATCAGTGAGACTGCAGAAAAACCTATGAAAGTAGTTGAAGAGGTCTCAGTTGGATCATTCGCTGGAAGACACCCTCTTGTTCACGAGACACACGATCCCAGAAACTGCAGCCCACCATCAATCGAGGAATTTCCTGGTGATTTGTTCAACCAGCGTGAAAGGCGACTTGGTGCAGTCGTTATTCATTTTCTGGTTGCATTTTACACATCCTGGGCCATCGCTATTGTTTGCGATGATTATTTTGTTCCTTGCTTGGAGATAATTTCTGATAAGATGAAACTTCAATCTGATGTGGCCGGTGCTACTTTCATGGCTTTTGGTAGTTCAGCTCCCGAACTATTTGCCTCAATCATTGGTGTCTTTATCACAGAAGGGGACATTGGGATCGGCACCATCTTAGGCTCAGCGGTATTCAACGTGCTGTTCGTTGTTGGAGCATGCGGCCTATTGGCCGGAACGGTTTTGTATTTGGCATGGTGGCCTCTTGTCAGAGACAGCATGTTCTATCTGTTCAGTGTTGTCATTCTCATCTTGGTGCTCGTAGATAGCATTGTAACCTGGCCAGAGGCACTGGCTATGTCGTGTTCCTATTCGATATATTTAATCATTATGTACTTCAATCCCCGAATTGAGGCCTGgctttataaaataaccaaTACGAACAGTCCTGAGTTTAAGTCCGATCTACACGCTTCAAACGgcatcaaagcaaacaacaatggATACCAAAAGATTGCTGATGAAGAGCAGAGCCACAGcgaaggaaaagagaaaaaaccaCTAGGCACCAATGAACAGACAAACTCTGCAAAGGAGACTCCTGAAGAGAAAGAAGATGGAAAAAGGGAAGAGGAACAACAAGAGGAAAGGAAAGAGGACGGTGGGGAAGAACAACCACTAAAGGGAGACGGTTTGAAACACCGACCCGTCCCAGATCTCACGCTAGGGACGCCATTTAATCCACCGGAGGGGCTGGCGGCTAGATTTTGCTGGTTCCTTGGCCTTCCAATCAACATAGCGTATTTTTTCACCATCCCGGATGTGAAGAAAGAATCTTGCCAGAAGTGGGTGGCTGTTTCTTTTATAGTTTGTATTGCTTGGATTGCAGCCTTGTCTTACACCCTCGTTTGGATGGTTACTATCATTGGGTATACATTTAAGATCCCGGATGCAGTCATGGGTCTTACACTCGTCGCTTTTGGAAGCAGTGTACCAGATTGCTCGTCAAGTCTGTTCATTGCAAGAAAAGGTGACGGCGACATGGCAGTGTCAAACACTGTGGGAAGTAACACATTTGATGTTCTTCTGTGTCTGGGTATCCCATGGCTTATTAAGTCAGCGGCGTGGAATGCACCTATTGAGATCAGCAGTCGTGGACTATTTGTGTCGTGTTTTTTCATCGTGGGATCCGTGGCTATTGccttttttgtcctttttttgaacaactggatCTTGAACCAAAAAGTTGGGTGTTTCTTTGTATTTATCTATTTCATTTTTCTGGGGACGTCAGTGTCCATGGAAATGTTCGTATTCGACAGGTTTCGCCTGCCAATGTGCAGCATCGaagtttgaattttctttttcgatGATTATCTTGTTCTCAAGGGTTTAATTTCTGGGCTTTGGAGCCAAAAACGTTTTGGTGAGCAAACTTTGCCATTCTGTGAGCAGTTGTGGCAACCTAGTTCCCAGGGCGTTTTTCCTCTGTTTGGTTAGGTACATCAAGAAGTCTTGGGGAAGAGGCTAAGCCGCAATCtatcatttaaaaattattcatGACCCTTA

Protein

Uniprot

Uniprot term	Description
Q8CGQ8	Sodium/potassium/calcium exchanger 4 OS=Mus musculus OX=10090 GN=Slc24a4 PE=1 SV=2
Q8NFF2	Sodium/potassium/calcium exchanger 4 OS=Homo sapiens OX=9606 GN=SLC24A4 PE=1 SV=2
Q9EPQ0	Sodium/potassium/calcium exchanger 3 (Fragment) OS=Rattus norvegicus OX=10116 GN=Slc24a3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01699	Na_Ca_ex	Sodium/calcium exchanger protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044880	Homologous_superfamily	NCX, central ion-binding domain superfamily	Interproscan
IPR004837	Domain	Sodium/calcium exchanger membrane region	Interproscan
IPR004481	Family	Sodium/potassium/calcium exchanger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10846	SODIUM/POTASSIUM/CALCIUM EXCHANGER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005262	Molecular Function	calcium channel activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0006874	Biological Process	intracellular calcium ion homeostasis	Interproscan
GO:0008273	Molecular Function	calcium, potassium:sodium antiporter activity	Interproscan
GO:0070588	Biological Process	calcium ion transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13752	SLC24A4, NCKX4; solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	-	Transporters	ko02000	deepkoala