Gene detail

Detailed information of ENSKKQP00000017303.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015760107.1, PREDICTED: microfibril-associated glycoprotein 4-like [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O70165	Ficolin-1 OS=Mus musculus OX=10090 GN=Fcn1 PE=1 SV=1
Q29042	Ficolin-1 OS=Sus scrofa OX=9823 GN=FCN1 PE=1 SV=1
Q9WTS8	Ficolin-1 OS=Rattus norvegicus OX=10116 GN=Fcn1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000013 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00024 all species →	PAN_1	PAN domain	Domain	Interproscan
PF00147 all species →	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003609 all species →	Domain	PAN/Apple domain	Interproscan
IPR014716 all species →	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR036056 all species →	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan
IPR002181 all species →	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR050373 all species →	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR020837 all species →	Conserved_site	Fibrinogen, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143 all species →	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0062023 all species →	Cellular Component	collagen-containing extracellular matrix	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10104	FCN; ficolin	-	Lectins	ko04091	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.