Detailed information of ENSKKQP00000019618.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029182734.1, high mobility group protein B3-like [Acropora millepora]
Species Acropora austera · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O54879High mobility group protein B3 OS=Mus musculus OX=10090 GN=Hmgb3 PE=1 SV=3
Q32L31High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2
O15347High mobility group protein B3 OS=Homo sapiens OX=9606 GN=HMGB3 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002244 (this species only)
Transcription factor familyHMG · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09011
all species →
HMG_box_2HMG-box domainDomainInterproscan
PF00505
all species →
HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036910
all species →
Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR009071
all species →
DomainHigh mobility group box domainInterproscan
IPR050342
all species →
FamilyHigh Mobility Group Box (HMGB)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112
all species →
HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008301
all species →
Molecular FunctionDNA binding, bendingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSKKQP00000019618.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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