Gene detail

Detailed information of ENSKKQP00000019989.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: RMX61204.1, hypothetical protein pdam_00005619 [Pocillopora damicornis]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

ENSKKQT00000022940

ATGGCAACAGTCAAAGACGAGAAATACTCGCCGCAATCGTTGGAGTGTCCCATCTGCAAAAACATCTTCAAGGACCCAAAAATCCTATTATGTCTTCACTCGTTCTGCCGAAATTGTCTGGAGAGTTTCGATGTAATCGGAGCGGGAACCAACTCGATTGTTTGTCCCCTTTGCCGAAAGCTGACTCCGATTCCAACGGAGGGAGCACAAATACTGCCCAGAAACTTCCTTCTGACCAACGCGTTGGATCAGTTGTCCGTAAAATCAAGCAAGGAGTATACTTTGCACTGCACAAATTGCGAAGACGAAGCACCGGCCACTTCGCGATGTCTGGAATGCGCCGAGTTTCTGTGCTCGAACTGCGTTTTGGCTCACCGACGAATACGAGTCACCAAGGACCATCGTATCCTATCGCTTGACACGCTACAGGCGGATAAGCAAACTCTGCACAGACCGTCTTTCTGCCAGCAGCATGCGGATGAAATGTTCATGTTTTATTGCGTGCCCTGTGATTGCCTGATATGTCGCGAATGCACGATTCTTGATCATCGTGGACACAAATATGCTGGTCTCAAAGAAGCGCTGGAAGAGCGTAAAGTGCTCATCGACGAGCGGTTAAATTTCTGCATCGACGAAAAGATTCCTCCCGTCCAAGATGCAGTGCAAGAGGTCAAGGCCATGGCTGCTAAGCTACGCGCACGCGCAGAAGCTACCAAAAGCGAAATTTGTGCCACTGCTGAAGAATGCGTCAAGCGAATTGTCTCCAGGAAACAAGAAATACTAGCTAGAGTTGACATCATGgaacaagaaaaagaagctGTTCTTCGCAACCAGCAAAACCAGCTAGAGACAGAGCTGTTTAAATACACCAGCTCACGTGACTTCGTTGAAAATGTGCTTCTCCATGGAAACGAAGTCGAAATTATCCAGCTTCGCCAATTGATGCTTGACCGTTTGGATGAACTGAATGTGATTGAGTTGGATTACAAGGAACCAGAAGAAAACGATGTCATAGACTACATTCTAGACGTGGAATCGGTTGAGAGTGTTGCAACTACGATGGGTCGCGTGACATCAAGCGTGACTTTCACCGCACAGTGTGGCGCCCGCGGCCTCGGAATCAAATCGGGTAAAGTCGGAGTCGAGACGTGCTTTATTGTCGAACTAAAAGATCGCTTTGGGCAATCTTCGGTTGAAGGTGAACATAGCTGCCCAGTACAAGTTAAGATCCAGGCTCCTGAAGGATTCTTCCTCGGCAACAAGGTCACGAATAACGGAGACGGAACCATGAAAGTGCGTTACATTCCTGTCACGCAAGGTAAGCACATTTTGCAGGTGGAAGTCCGCGGGCGTGAGATTGAGGGAAGTCCATTCAGCGTCAATGTGTTTGAAGGAATCGACTACCAAAAGGTTGGACTCGCATTTATGAAGATAGGGTCCCCAGGAACCAAGAGCGGAGAGTTTAAACAACCTTGTTCCGTAGTGACCGACAAGGAAGGAAATATCTATGTTACAGACTTTGTCAACTGTCGCGTTCAAAAATTTGACGCACTTGGAAAACACCTTCTCGACTTTGGAACCCGTGGAAGCAAAGATGGACAGTTCCAGAACCCCTGCGGAATTCTGGTGGATAATAATGGCATAATTATCGTGTCAGACTGGGATAATAACCGCGTTCAGCTCTTTAGTCCTGAGGGAAAATTTATCGGCAAGTTTGGAGCGAAAGGTTTGGAAGCCGGAAAACTGAACCATCCAGCTGGTTTAGCTCTGACTAAAGATGGCAACTTGCTGGTGGCTGATAAAGATAACCACAGGATACAACTCTTCAAAATGGATGGCGCACACATCAACTCATTTGGTTGCCATGGTAGCGAAAACGGAGAGCTGAACAGTCCAAACCACGTGGCAGTCACACATGACAATGGCTGCCTAGTAACTGACACTGAAAACAACCGCATCGTAAAGTTTGATAGCACTGGCAAGTTCCAGTTTGCATTTGGCGGGAAAGGTAGCGAAAAGGGTCAACTTGATCGTCCTGGAGGGATTGCAGTGGATCCCGAGGGATTCATCATAGTGAGTGATTTCCAAAATCACCGCATCCAGATCTTTCAGCCCGATGGAAAATTTTATGCTGCGTTTGGCAGTGAAGGAGATCAAGACGGTGAATTCAAGTTTCCTGGTGGTCTAGCACTGACTCTCGATGGAAGAATTGTGGTTGCCGACAGGCATAACCATCGAGTGCAAGTCTTTTACGGAGATCGACCTTCATCTCCAATGTCTACCGAAATTCGCAACGATTTGCAGCTAACATCGACAGGGAAAGGGCATATCTACAGATCGCCACATGGTTTTCCACCAGACGGTTTTAGGAGAACTGTATATGATGTCCTTCCACCTGTACTTGGAAATGCAGATTATGTAACTGACAAGGAGCACTTTACCACAACAACAAGCTCAACGCATGATTATAAAGTGCATGGGGAGACACTAGGAAGCACCTTGTTTAAAAAAGCTCCTGGATCATGGAAAGTTCACTATGTAGAAGATAATATTGGGAAGTTGGGTGTTAAGCCATGGAGGAAGCCACTGATAATGGGAAACCAGAGCACTGAAATGCAGTCTCAGTACACAGGAAGACCAGGAGTGAACTTAGATACAGTACACAATGCTGGTATTCAGCCATTTAACCTTGCTGATCACCATAGGGAGGGTACTAGTAAGGATCTTGTGCCTTCGACCATCAACAGAGGTATTGCTGGTCAGAAGTTTTACCCCAGAGACAGAGGTGTATTGACGTACCACATGGATCCGTATCTGACCACGACACAAAGAGAGCACCGAGCATTCACAAAgCATGAACAGGGACGTTATCCAAGAAAAGATTATGCAACATACTGGGAATGCGAAGAGTATCCTAAAGCCTGGGGCCATGGCTCGAAAGAAAATCCATTGCCCCCAAATTCTGTCCCTCGAGAAAAAGGACCTCTAAGGGATCGAATTTGGTTCAAAGAACCAACAACTATCCCCAGATTGCCTAAATCGCTGGAACCAGTTCCAAATAAGGGAATGAAAACGCTAATGACAGAATCATATACCATACCTCCCGAGAGGAAACGATGGGAATTATTCAGCATGAATGTGCCAAAACCCTGGCATGCTCCACTTGAAAGTCCAGGTTCAAACGAGAGATTCCAAGTACCACGGATGTACAACACTGAATATCAGTTTTACGGCAGTGAAAAGTCAGTCACAGTTTGA

Transcript

ENSKKQT00000022940

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
E7FAM5	E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1
D3ZVM4	E3 ubiquitin-protein ligase TRIM71 OS=Rattus norvegicus OX=10116 GN=Trim71 PE=3 SV=1
Q1PSW8	E3 ubiquitin-protein ligase TRIM71 OS=Mus musculus OX=10090 GN=Trim71 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008961 (this species only)
Ubiquitin family	E3\|E3 activity RING\|RING · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097 all species →	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF01436 all species →	NHL	NHL repeat	Repeat	Interproscan
PF00630 all species →	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF00643 all species →	zf-B_box	B-box zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR017907 all species →	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR001258 all species →	Repeat	NHL repeat	Interproscan
IPR000315 all species →	Domain	B-box-type zinc finger	Interproscan
IPR018957 all species →	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR017868 all species →	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR001298 all species →	Repeat	Filamin/ABP280 repeat	Interproscan
IPR053347 all species →	Family	Axonemal microtubule stabilizer	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR011042 all species →	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37404 all species →	HCG1796489	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000019989.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.