Gene detail

Detailed information of ENSKKQP00000020455.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015761464.1, PREDICTED: uncharacterized protein LOC107340613 [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000023432

ATGGCCAAAAAGAAGAAATCGCGCCAATGGCATCGCGTCTACGCTCAGAAACTCATGGGCAAGGCAGAAGACATTATCAAGGAATTCGACCCGTCTCAAGAGAACAAGCTAAAGCAGTTAAAAATATCCCTTGAAGACCGGCTGGAAACGATTCGTGCTTTAGACGCCGAAATCTTGGACGAGCTTGAAGATGGAAAAGGAATTGAAGAAGCTAAGACATTGAAGAACTTTCGGAGTGCCGTTCACGAGAACCCCGACCTTCTAAAGCTGGTGCCATTAGGAAACACGCCTGACGTTCGGAAGCAACGAGGAACCTACGACAAGATAGAAGCGCACGTAAGAGATTTACAAGCGTTAGATGTGCCTACGGAAACCTATGGGAGTCTTTTGGTGCCCGTACTTATGACCAAAATTCCCGAAGATATCCGCCTTTTAGTGGGCCGGGAAATTAAAGATAACGAATGGAACCTCTCCGAAATATTGAAACTTCTACGAAACGAAGTGGAAAATAGAGGAAGATGCGAAGGAGTGAATGCTCTTGGTCTGAAGGAGAAAATATACAGTCCAGAAGATCGAAGGAACAATTGGAAACTGGAGCCACCGAGCGCTGCGAGGTTATTTGTGGAAAATCAATCTTCAAATGCGACACATTGTACGTTTTGTAAACAGCAACACACAACAGCGAGTTGTCACGTCGTAACACACAAAATGGCCAGGAAGGAGTGTCTTAAGAAACAGGGCCGATGTTTTATTTGTCTTAGAAATGGTCACCTCGCAAGAGAATGCCGATCGAAAATCAGTTGCTTTAAATGTTCCGGAAGACATCACGTCAGTTTGTGCGAAATCGAGCCtccaacaacagaaacaatGCCTAATGTATCCCCTGCGCAAGCAAGCACGTTTCACGTGGGGTCGCAAGATTCAATTTTGCTACAAACAGCCCAAGTCCTAATCAGAGATAAGGATGCGGACGTCTCGACTGGAACGAGAGCGAGAGTGATTCTCGATTCAGGGAGCCAGAAGAGCTACATCACGCAACACGCGCGCGACCAGTTAATTTTACCATCCACTGGCAAAGAGTCACTCTTGATAAAAACATTCGGAAATGACGTCACCAGCCAACCAACAGAGTGTGAAAAAGTGAAAGTAAGCGTGGGAAACATTAACAAGCTGTCATCAAGAGAAATTGAAGTCTTCGTTGTGCCGACAATTTGTTCACCAATCGGAAGCCAACCGATTAACAACGCCAAAAATCAATTTGCACATTTGCAagacattgagttagccgatagCAACCACAGAAAAGAAGAATTACAAATCGATTTACTGATCGGAGCCGATTTCATGTGGTCATCTTTCACTGGCGTGACAAAACGGGCAGAGAATAACGAGGGACCGGTGGCGAGTTGTACGATTCTAGGATGGGTCTTGCCTGGTCCAGTTTCCGGCGAAAGAAAGAAGCCACGACTTTCAAGTGTTAATTTTGTTGCAACCCATGTACTTAAAGTTGCCACCCAAACACAGCACGAAGGTCCAGGAACAGAAGAACTGCTGCACCGTCTCTGGGACTTAGACTCCATTGGAATTAGAGATAAAGAGACTGTACATGACAAATTCCTCGAAAACATATCGTTGCCTTTAACGGTTGGTGGTTTAGACGAGATTGATCCTACTAAGGAGCATAAAGTCCTAGGATCTAACTGGAACCTAGCAGAAGACACGTTTGTCCTAAAGTTGAGCAAGATCGTAGAATTTGTCCAAGGCCTCGAACCAACAAAACGAAACGTTCTTCGCATCGCAGCCAAACTATTTGATCCGCTGGGATTAATTTCACCCATTATGGTAGTGTTACGAATGCTCTTGCAGAAGCTGTGCCTAAACAAGTCCCAGTGGGACGACACCATTTCCCAGGACGAGCAATTCCGTTTACAGAAGTGGATGACCGACCTGCAGAGGGTTGACAACGTGACGGGCCACCGCTACTAA

Transcript

ENSKKQT00000023432

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000004 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05585 all species →	DUF1758	Putative peptidase (DUF1758)	Family	Interproscan
PF05380 all species →	Peptidase_A17	Pao retrotransposon peptidase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001969 all species →	Active_site	Aspartic peptidase, active site	Interproscan
IPR008737 all species →	Domain	Peptidase aspartic, putative	Interproscan
IPR008042 all species →	Family	Retrotransposon, Pao	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22955 all species →	RETROTRANSPOSON	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004190 all species →	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16733	RACGAP1, Tum; Rac GTPase-activating protein 1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.