Gene detail

Detailed information of ENSKKQP00000021142.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_044176749.1, uncharacterized protein K02A2.6-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKKQT00000024151

ATGCTAAGAAGTATGCGATCCATTATTAAGAGTTCGCGCATACAATCACAAAACACAGGTTTTTGCCATGTTTCTCAGAACAGACACACATTCATCAATTCAATCCACACAATTCAAACGAACACAATTCACCAAAGGAATCAAAAGCAAGGAGAGGTTGTGGAATCGTTTGTACGAAGCCTTTATGAATTGGCGGAACACTGCGATTTTGGAACAATTCGTGATCAGCAGATACGAGACAGCATTGTCATCGGAATTTCCGATAAAACTGTGTCGCAGAAATTAAGAAATGCTGATGATGCCACAAAAGGTAGTAGGGATGAATATTGGTTCTTAGGTGCGCTATCAAGTGACTTACAACAAGATAACAAATGGAAAGTTCAGCTTAAAGTCAGCGGTAAGCCAGTAGTTTTCAAAATTGATACGGGTGCAGCCATTATCGCCATGTCTAAGACGACCTTTGACAGTTTGCCATACGAACCCAAGTTACATCCGTCTTCAATAGCCCTTTTCATTCCAGGAGGTAAATTACAGTGTGCTGGACAGTTTAAAACAGCGGTGAAAAATTGTAACAAGGAGTATGAAGTTGACATTTCTGTAATCAGTGGAGAACATTCCAGTAACTTGCTGGGATGTCAGGCAGCCTGTGAAATGGGTCTAGTTGCAAGACTGGAGGAGGTGGATGCAGCGTTGTTTGGTGATATCGGTCTGTTAAAGAAAGAGCTCAAGCGGATGGAAGAAGCTGGGGTTATTGAAAGAGTCAGTGGACCTACAGAGTGGTGTGCACCCATGGTACTGGTGCAGAAAAGTAATGGTAAGCTCAGGATCTGTGTTGATCTGAGAAAGCTGAATAGTGCTGTGACACGTGCACGATTTGTGTTGCCTACTTTGGAAGATGTTGCCCCAAAGCTCGCTGGTGCTCAGTACTTTTCAAAGCTTGATGCATTAAGTGGATTCTGGCAAATACCCCTACATCCAGAGAGTGCCAAATTAACTACGTTTACCAGCCCGTTCGGGCGATTCTGTTTTAAGGGGGTGCCATTTGGAATCACTTGTGCCCCAGATATTTTCCAGGGTTTGATGACAGATTTGCTAAAGAAGGAAAAAGGCTGTGAAGCAATCATGGATGACATTATTGTGTATGGGAAATCTGTCGAGGATCATGATGAGAACTTTTGCTTCAGGAAAATCACACTGAACTACTTTGGACATGTCCTCAGCGCTGATGGAGTAAGTGCAGACCCTGGCAAAGTGAAAGCTATTAGAGAGCCTCCAACAagaaattccaccGTGGTAGCATTCTACGATCCAAAGAAGCCAACTGTCGTTTGCGCTGACGCTAGCAGTTATGGAATTGGCGGTGTTCTGATGCAGGATTACAACAACCACCTCTGCCCAGTTGTGTTTTGTTCCAGAACACTCACCGAGGCTGAAGTCAAATATGCTCAAATTGAGAAGGAGTGCCTAGCAGCTGTGTGGAAACGTAAGAGATTAGCACGCTACTTGATGGGACTTCCAACTTTCAAGCTCCTGACAGATCACAAACCTCTTGTTCCATTGATTAACCACAGAGATCTTGACAAGACACCATATCGTTGGCAGAGGCCTTTAATGCGTCTAATGCGGTTCAACCCTCAAGGACACTTGTCAATAAGCGATGCCCTTTTAACGTATGACGATCGCATAGTAATACTTGCTAGCATGAGAGAGGAAATACTGGAACGAATTCACACCGGGCACCAAGGAGTAACAAAGTGTCGTGAGTGCGCCAACCTGTCCGTTTGGTGGCCTGGCATTTTCAAGGAGATCAAGTCAAAGGTTCAGTGGTGCCACTTCTATCAAGGAAATCAATCGTCTCAGAGGAAAGGGCCCCTGTTGGCCACAGTCCTAACAACAAGTCAAGCTGTCATCCAAAAGCTGAAGTCAGTGTTTGCACGATGGAGTTTCAAGTCAGCTTTGTTTGACGAATTTAAAGTGAAGTATGGATCCCAGCATACTACGTCAAGTCCTCATCACCAGCAGGCCAATGGTGCTGCAGAAAATGCGGTTGGGGTCTCCAAGCACATTCTGAAACAAGAAGATCCATTCCTTGCTCGTACGGCATACCGTGCCACCCCAATTCCAGCTACTGGAAAGACATCGTCAGAGCTGATTATGGGAAGACAAATACGTACTACTGTCCCAACTATGGCCAAAGTGTTAGAGCCAAAGCTTCCAAACCATGCAACGGTTAAGAAAGCTGAAGCTAAATCAAAGTAG

Transcript

ENSKKQT00000024151

Protein

Uniprot

Uniprot term	Description
Q8I7P9	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q7TD08	Enzymatic polyprotein OS=Cestrum yellow leaf curling virus OX=175814 GN=ORF V PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17921	Integrase_H2C2	Integrase zinc binding domain	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF17917	RT_RNaseH	RNase H-like domain found in reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR041588	Domain	Integrase zinc-binding domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR041373	Domain	Reverse transcriptase, RNase H-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984	PROTEIN CBG26694	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan