Gene detail

Detailed information of ENSKKQP00000021260.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_044175271.1, LOW QUALITY PROTEIN: protein tyrosine phosphatase domain-containing protein 1-like [Acropora millepora]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

ENSKKQT00000024269

ATGGATAGAAATAATTCCTTTGGAGAAGTTAAGTGGACTCGGGCTTTGTCTTCCGAACTACCAAAGAAAGATGCCGGTCCGAAGTACTCACGAATTTCTGAACATTTCCGTCATGTTACACCCGGTGTCATCCAGTGCTCGATGTTTTGTGGGGGAAACAAGTGTAAGTACGAGAACCCGTCCAGGATGAAAACCGAACAAATGGCCATTGATGGCCTTTATTCTTCGTGGGTTACCCCTTTGATCTTGGCTACAGCTCGTCCTTCTACAGAAgtaattaaaaaatacaatgtACTGGAACAATTTGCTATGACAGGAATTAAATCAATAATAAATCTGCAACGTCCTGGTGAACATGCCAGTTGTGGCTTTGGTCTTGAACCTGAAAGTGGATTTTCTTACATTCCTGAGGATTTCATGCAAGAAAACAtTTACTTCTACAATTTTGGTTGGAATGATTATGGTGTGCGATCCTTAGAATCTATTCTGGACATGGTGAAGGTTATGTCTTTTGCTCTAACCAAAGGCAAGGCTGCAGTACATTGCCATGCTGGTCTTgGAAGAACTGGGGTTCTCATTGCCTGCTATCTTGTGTTTTCTGAAAGAATAGAGGCTGAAGAGGCAATACACCGAGTCAGGTCAAACAGGACCAAGGCCATTCAGACCAGGGGGCAGATTCAGTGTGTTATCGATTTTACAAACTTCCTGCATCATCTATGGGTTGTATTTCCATCATGTGCACCTGGCGCCATAAAGTTTACCTTGCTGCAATACTTAAAACGACAGAAGCATTTGTTGCATGGAATGGAAGCAAGGAACCTTAAACACATCCCAAAGGTGTTACACGTGTGTTGTTGCCGCTTGCTTGAAGTAGCAGCAGTGAAGAGTGCAGACATGCCTTTAACAATAGCTCTCTTCCGTGAAGTCAAAGCTGTATTTTCTGAAGTTTTTGATAGTGACGTCCCAAATGTGTCCTCTAGTGAAGACCCCATTCAGCCTTCTATATCTGAGGATATTGTAAACGCCTTGAAACACAATCCTTATGTAGATTCCAGTGTTCAAGTGCTACACACTTCTTCAATGCAACATGCGCATAGTTGGGATGCAGTCGATAACGTCAATGACACACAAGACATTGAACATCACGGAAGATACCTTTTGCATTTGGATCTATCAAAGGATCCCAAAAATTGTACGGGTGGAAGCCGACGTGCGTCTTACTCCAGTTTCGAGTACAGTTCAGATGTAGGGCTTTTGCCTCCATCTCGTGGTCTGAAGTTAGAACCAATTAAACTCACAAGGAACAAAGCAAAAActaagaaagaaggaaaaaaactgcCAAGTTTAGAGTCTGAAGGGAGTATTGATATgacaaaagaaagcaaaacagcaGAGAACAAGTTTTGCAACTCTTTGAAGCAGAATGCAACAGAAAAGTCTACCGCTAATGACAGAATCCAGGTGGCAATATGTCTGGCATCAAGCGCATGCGCTGATAGTAGCGTTAATAATCGGGTGGAACGAGTAAAGCGGAAACTTAATAGTTCAGGATCATGGGAAGAAGTTTATAGTGAGAGTGATCCATGGATCCTGACGCGCTTACTTTGGTCTTGGCTTTCTGAACTTGCAGAACCTGTTATCACAGAGAAAGAGATAACTTTGTTAGAGGAAAAAGCCGAAGACCCCATTGCTGCTGTAAAAGAACTTGGCTTTgGTGTGAGAGGCACTTTAGAATGCTTGATCACTACCATATACGAGTTGGAACCTTTACCACGCGAGTTGAGTGATCGAGTGCTTCGCCACACAGCCATGGTTCTTACACAAAACAAGGGACTGTCTTTAACACAAAGCAGAAGAAGATCTGAACGATCAAATAACGCGTTGACTCCACTACAGTCGCCAGAGCAAACTACTGCTGATGGGACAGAAATCCCAGAGACCGTTCCCTGTTCGCCGTCATTTAGATTGCTTCGCTTCTTGTGGCTGCTTTTAGAGTCACTTAAGAATAAGAGAGGATTGTGA

Transcript

ENSKKQT00000024269

GCggttttggatgattttttatTCAGTTTTGGGGTTTCCAATATACCCCAATGCCCCCCTCCATAACCGAGGTTTACAAATCGTTTAACGAACGCGGGAGACTGGAGTCTAAAGACAAAATGGCGTTAGTCCGATTATGGGGAACTAAGCAGCGAGCGAGACCGCTTCTGATGAAGTGACAACAACtggttttgtttgctttgcgCGTAGCCTCGGTAACCAGCATGGCTAATATTGGAGACTGGATGaattggaaaagcataacacGGAACCTCGGCTTTACATTTTAACGAATTTAATGGATAGAAATAATTCCTTTGGAGAAGTTAAGTGGACTCGGGCTTTGTCTTCCGAACTACCAAAGAAAGATGCCGGTCCGAAGTACTCACGAATTTCTGAACATTTCCGTCATGTTACACCCGGTGTCATCCAGTGCTCGATGTTTTGTGGGGGAAACAAGTGTAAGTACGAGAACCCGTCCAGGATGAAAACCGAACAAATGGCCATTGATGGCCTTTATTCTTCGTGGGTTACCCCTTTGATCTTGGCTACAGCTCGTCCTTCTACAGAAgtaattaaaaaatacaatgtACTGGAACAATTTGCTATGACAGGAATTAAATCAATAATAAATCTGCAACGTCCTGGTGAACATGCCAGTTGTGGCTTTGGTCTTGAACCTGAAAGTGGATTTTCTTACATTCCTGAGGATTTCATGCAAGAAAACAtTTACTTCTACAATTTTGGTTGGAATGATTATGGTGTGCGATCCTTAGAATCTATTCTGGACATGGTGAAGGTTATGTCTTTTGCTCTAACCAAAGGCAAGGCTGCAGTACATTGCCATGCTGGTCTTgGAAGAACTGGGGTTCTCATTGCCTGCTATCTTGTGTTTTCTGAAAGAATAGAGGCTGAAGAGGCAATACACCGAGTCAGGTCAAACAGGACCAAGGCCATTCAGACCAGGGGGCAGATTCAGTGTGTTATCGATTTTACAAACTTCCTGCATCATCTATGGGTTGTATTTCCATCATGTGCACCTGGCGCCATAAAGTTTACCTTGCTGCAATACTTAAAACGACAGAAGCATTTGTTGCATGGAATGGAAGCAAGGAACCTTAAACACATCCCAAAGGTGTTACACGTGTGTTGTTGCCGCTTGCTTGAAGTAGCAGCAGTGAAGAGTGCAGACATGCCTTTAACAATAGCTCTCTTCCGTGAAGTCAAAGCTGTATTTTCTGAAGTTTTTGATAGTGACGTCCCAAATGTGTCCTCTAGTGAAGACCCCATTCAGCCTTCTATATCTGAGGATATTGTAAACGCCTTGAAACACAATCCTTATGTAGATTCCAGTGTTCAAGTGCTACACACTTCTTCAATGCAACATGCGCATAGTTGGGATGCAGTCGATAACGTCAATGACACACAAGACATTGAACATCACGGAAGATACCTTTTGCATTTGGATCTATCAAAGGATCCCAAAAATTGTACGGGTGGAAGCCGACGTGCGTCTTACTCCAGTTTCGAGTACAGTTCAGATGTAGGGCTTTTGCCTCCATCTCGTGGTCTGAAGTTAGAACCAATTAAACTCACAAGGAACAAAGCAAAAActaagaaagaaggaaaaaaactgcCAAGTTTAGAGTCTGAAGGGAGTATTGATATgacaaaagaaagcaaaacagcaGAGAACAAGTTTTGCAACTCTTTGAAGCAGAATGCAACAGAAAAGTCTACCGCTAATGACAGAATCCAGGTGGCAATATGTCTGGCATCAAGCGCATGCGCTGATAGTAGCGTTAATAATCGGGTGGAACGAGTAAAGCGGAAACTTAATAGTTCAGGATCATGGGAAGAAGTTTATAGTGAGAGTGATCCATGGATCCTGACGCGCTTACTTTGGTCTTGGCTTTCTGAACTTGCAGAACCTGTTATCACAGAGAAAGAGATAACTTTGTTAGAGGAAAAAGCCGAAGACCCCATTGCTGCTGTAAAAGAACTTGGCTTTgGTGTGAGAGGCACTTTAGAATGCTTGATCACTACCATATACGAGTTGGAACCTTTACCACGCGAGTTGAGTGATCGAGTGCTTCGCCACACAGCCATGGTTCTTACACAAAACAAGGGACTGTCTTTAACACAAAGCAGAAGAAGATCTGAACGATCAAATAACGCGTTGACTCCACTACAGTCGCCAGAGCAAACTACTGCTGATGGGACAGAAATCCCAGAGACCGTTCCCTGTTCGCCGTCATTTAGATTGCTTCGCTTCTTGTGGCTGCTTTTAGAGTCACTTAAGAATAAGAGAGGATTGTGATGTGCCGTTTGAGATTATGCTTCAGGCATTGGCACCGAATTAAGAAGAACATTAAGCAATGGAAACAAGTCCTATTAAAAAATTTAAGTCATGCTCTATATTCTCAGAGCACCAAAATGTAGTTATCAGTCATGCATAGGGGCATATCCGTTTTTATTTATTGGCGATACATTTCCGCAATAAGAGTCTTggtgtaatatatatatttggcaGTCGGTCTTCTTagcttttatttattatttatttttttgttaatattatttaattttttgttaattgttaAAGTTAGCTTTGTTCAGCTGTGGAGGGTATTCAttgctctgtaaatttgttcaTCACGCCAAAAGATGTTTCGAAAAATTTATTTAGGCTGAATTAGCGAACGTTTGCTGCAACAATTTCTAAGATATCCTTAGTACAAACCGGTTTCTCAAGGAATCACTTTTGCAGATGTTTCCTTCTCTATCCATATTTACCCATAAGAAAAATAGTGTGCCAGTACCGTCACGGTATTCAAACGAGTCTTTATTTTACCGGAAGAGCGAACTCCTACTCGTTTTAAACTTTacgggaatttaaatgtttcttttaaattaTTCCCATTTGAGTTGAGAAGTATATTAGTAGTAGGTATTCAACAAAAACTGGATTACACATTAAAGTATTCATACTCTATGTAAACAGCTCGCAAAAATGCTATTAACACGAACGAATTACAACACCAGATTTTGCAATCCATAAGCAGATAATATAGTTTTACCCCTAGATACTTGTCATGCAGTCAGATGTGATCACTGAGGTTAAGGAGGATGTAAAACTACTTTGTCATACTCTTTTCTTCTACACTTTTTTGGTTTGCTAATTCCAGCAAAAATCGTCGCAAACTTATTTTCTGCGAGCATGACGCGCTGCTGAAATACtggttgtttaccatttaccaCAAAGTTTCGGAAATTTCGGTTAGAATGTAATTATAAATGGTAAGGCTACTTTGGTGAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1L1R5	Protein tyrosine phosphatase domain-containing protein 1 OS=Danio rerio OX=7955 GN=ptpdc1 PE=2 SV=1
A7E379	Protein tyrosine phosphatase domain-containing protein 1 OS=Bos taurus OX=9913 GN=PTPDC1 PE=2 SV=2
A2A3K4	Protein tyrosine phosphatase domain-containing protein 1 OS=Homo sapiens OX=9606 GN=PTPDC1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005324 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00782 all species →	DSPc	Dual specificity phosphatase, catalytic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003595 all species →	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR049573 all species →	Domain	Protein tyrosine phosphatase domain-containing protein 1, PTP domain	Interproscan
IPR020422 all species →	Domain	Dual specificity protein phosphatase domain	Interproscan
IPR016130 all species →	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR029021 all species →	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR000340 all species →	Domain	Dual specificity phosphatase, catalytic domain	Interproscan
IPR050561 all species →	Family	Protein Tyrosine Phosphatase	Interproscan
IPR000387 all species →	Domain	Tyrosine-specific protein phosphatases domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23339 all species →	TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0060271 all species →	Biological Process	cilium assembly	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0016311 all species →	Biological Process	dephosphorylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18078	PTPDC1; protein tyrosine phosphatase domain-containing protein 1	EC:3.1.3.-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.