Gene detail

Detailed information of ENSKKQP00000022033.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015751126.1, PREDICTED: ubiquitin-protein ligase E3A-like [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000025215

TACACAAATCCagtcaaattttcactttttggtAAGGGAGGAAAACCAGATTACCGGGGAAACATCTATCAGAGCAGAGTGGAGAAgAAGCGAGCAGCTGAACAGATGATAAAGaattattttttccaacttACGGATGGTTGTGGCTCAGAGGAATGCAGCAATGAGTATTGCGCATCAAgtggaagaaaacaaacatcAAAAGATGATGCCGCTGCCCTGGCCATTCAGTTATTTATGAAGAGGGCTCGTCTCTGTGAGCCTTGGCAACAAAGAAATCACAGAGAAGTCCCCCATTTCACAGAGAAGATGTTGTTGTCCGACTTGAACTCTTGCAAGGAAAAGGGAGACTTCAAGAAACTTGTTCACAGCATAGGAGATGTATTTTCCAGCTCCAAATCACTCAATGGAAGTTTCCTATTAGAGAATTTATCAAAATCACCACATCATCTAACCAATGTTGACATAAATGCCGTGCGCCGTTGTTATGCAGCACTTTTCAAGACAGGTGATTCATCAGTGGAGAATTCTTTGATAAATTCTCTTTCTGCTTTATCGCCCACTATTGAAATGGATCTGAGGTATAATTCTCCAAGCAGTGACCCCAATTTCTTGAACCAGTTTGTAATTATAATGGAAAACACCATGCTTCAGAGTCCAGAGTATCTGGACCAAGCCCTGCCTAGTTTCCTCAAGGCTATGGCATTACTTCCTGTCAAAATGCAAGCCACGTTGGTCCGCATTTGGGCACAATTTAGCAGTGTGGAGATCCGACGTATGGTAGAAACTGTACAGCAGTTGATCACTTACCAAGTGTTAACGGGACCCAGCACCACCAGCGGCTCACCAGTACAGGATGATGAAGTTATTGTAGCTGCAACCAAGGTAATGAAACTGTTCTACTGTGCCAGCGTGTTGGGAGGAACCTTTGATGAAGCGTATGGCAACTGCCAAGATGGTGCTAATTTGTCCAAAGGACCTGATGACCCACTTCTGAAAGAATTGGATATTGAAGTACTGGACTGTCGTCAACCATTAGTTAAATTTGAAGAATTCGTTAATGAGGCATTGAATGATCAAATTGAATTGGAAAGAGACTTTACCTACTTTAAAAGTGACTCACAGAGCAGGTTTGCATTTCTGAAGTACAACTTTATCCTATCCACGGTTACAAAGAGCATGGGTTTGTTTTATGATAATCGGGTGCGTATGTACAGTGAGAGGCGCTTAACACTGCTTTACAGCCTTGTGAGAGGTCAGCAGGCAATGCCGTACCTCAGACTTAAAGTGAGAAGGGATCACATCATTGAAGATGCTCTTGTTAGTCTTGAAATGACGTCTCAGGACAATCCTGGTGACCTTAAGAAACAACTCTTCGTGGAGTTTGAAGGGGAACAAGGAATTGATGAGGGAGGTGTATCCAAGGAGTTTTTTCAGCTGGTTGTGGAAGAAATTTTCAACCCTGACTACGCAATGTTCACATTTGACGAGATTACACGTTACTACTGGTTCAGTCAAACCTCGTTTGAAACGGACGCACAGTTTTTACTGATTGGATTGGTGCTTGGTCTCGCTATCTACAACAATGTGATTCTCGACGTTGGTTTCCCTATGGTGGTCTACAGAAAGCTGTTTGGACGAAGGGGAACATTTGCAGATCTCAAGGATTCCCACCGTGTTCTTGCTTCTGGTCTGCAGAATCTTTTGGATTATGATGGTGACGTTGAAAACGACATGATGTGTACTTTCCGCATCGGCTACACGGACATGTTTGGTTCGTCATTCTCCAAGgaactgaaagaaaatggaGCAAATATAGCTGTTACCAAGGAAAACAGAAGGGAATTCGTCGAGCTTTACGCTGATTTCATCCTCAACACATCCGTGGAGAGGCAGTTTAAGGCCTTCAAGCGTGGCTTTGACATGGTAGTGGAAGACTCACCTCTCAAGTTATTCTTCCGTCCAGATGAAGTGGAATTGCTAGTTTCCGGCTCCCAGGACTTTGATTTTGATGCATTGGAAAAGTCGGCTGAATATGACAATGGACTCTGTAAAAGCTCCACCTTAATCAGATGGTTTTGGGATGTGGTGCGTAGCTTCACAGTGGAGCAGAAAAAACAACTGTTGATGTTCACAACTGGAAGCTACAGAATTCCTGTGGGAGGCTTATCCAAACTCAAGCTTATCATTGCCAAGAACGGACCCGATTCCGACAgACTTCCTACTGCTCATACCTGTTTTAATGTTCTTCTGTTACCGGAGTACTCGAGCAGGGGAAAGTTGAAGGAGAGGTTACTCAAGGCCATCACACATGCTAAGGGATTTGGGCTTTTTGAATTTAGtcgacttgaatgttga

Transcript

ENSKKQT00000025215

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q05086	Ubiquitin-protein ligase E3A OS=Homo sapiens OX=9606 GN=UBE3A PE=1 SV=4
O08759	Ubiquitin-protein ligase E3A OS=Mus musculus OX=10090 GN=Ube3a PE=1 SV=2
Q8CDU6	Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus OX=10090 GN=Hectd2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004925 (this species only)
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan
PF16558 all species →	AZUL	Amino-terminal Zinc-binding domain of ubiquitin ligase E3A	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR042556 all species →	Homologous_superfamily	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain superfamily	Interproscan
IPR044611 all species →	Family	Ubiquitin-protein ligase E3A/B/C-like	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR032353 all species →	Domain	Ubiquitin-protein ligase E3A, N-terminal zinc-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45700 all species →	UBIQUITIN-PROTEIN LIGASE E3C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10587	UBE3A, E6AP; ubiquitin-protein ligase E3 A	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.