Gene detail

Detailed information of ENSKKQP00000024737.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015765378.1, PREDICTED: stAR-related lipid transfer protein 13-like isoform X4 [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000028662

ATGAGTGAAACTTGTGGAAAAGACAACGGtgatttttgcgtggatttcttAGATGCTTCTATGGAAATCGTCGCGGATTTCGCATCGATGATAGCGAACGAATTAGAAGCCCTGGAGGCTTGTTACTGGTTGAAAGCAGCAGGATTTCCACAGTATGCACAAGCTTACGAAGATGGAAAGTTCCCGATTGATACTGCCTCAGTCATCAAGGAACATGACTTCCTGGACCAGGATTCGATCCAATCCTTGTACAGACGCCTTCAAACACTAAACCGCTGTGCAAAAATGAATCTTCACATCAAGAGTGATGGTTATGATTCAGATGAAGAAGATCTCATTGCCTTAAGTTCAAGGTGGAAACTTCAAAATAAGAATCGTCGTTGGCCAAGTAGAAGAAATGGTCCACGTGGAGGTTTAAGTAGCTCACAAAATGGAATCAACTCATCTGTGAACAGTGTAACAAATGGAAAACAAAGGTCTTTTAGGAGAGACAAACCTGTCACTGATCAGCTGGCACCATTTTCACACTTAGATTTGTGCGTAGCATCAGGAAGAACAAGTTTATATGACAATTTGTCACCGAATCTAAGTCACAGTACACCGTCAATATCAAATGTTGGTAAGGACTTCAATAAGAACAATCGACCACCATGCTCAGTGAGAACACAAAAACGAAATCTCATAAGCAGTGATTTAGGACTGGAATCTTGCAGTGGATCATCAAATGATGCTCTATCAGATTTAGAACGCGATGATGAAATTGGTGATTTACCTGCAGACTTATCAATGCTGCAATCAATCAGAAAATCGGAAAAAGAATGCAATGCCGATATGACACCTTCATCAAGAGCAGAGAGGCCTAGAGTACGGTGGCACAGCTTTGAGAGATCTGTGAAACCAGAAGTTCGTGTTATGTCTCCAAAAATATGCGACCTTACAGCAGGACAGCTGGCAGTCCTCAGAAAATATTCACTTTTGAAACTCACTGCCCTAATGGAAAGACATACACACTCTCACAGAGGCATGTGGAGCTGGTCATTTCCCCATTTCTTAAAGAAGTTCAAGTCTCCAGACTATAGAGATAGAAATGTTTTTGGAGTTCCTCTTTCCATTGTCCTTCAAAGGACAGGCCAACCTCTTCCAAGATCTATACTCTTTGCGATCAATTATCTTCAGAGAACAGGAGTTGATGCTGTCGGCATTTTTCGAAAGTCAGGTGGAAAACAGAGAATAAATCACCTCAAGGAGATGATTGAAGGAGATCCAGAGAACACCGACTTTGAGGGTCTGTCACCATATGATATGGCTGACATGCTGAAGCAGTACTTCAGAGAACTTCCAGAGCCTATCTTGACCTCCAAGCTTGCAGAGACATTTATATCTATTTTCTCAAGTATTCCTTCAAACTCCAGAATGGAAGCAATGCAAGCAGCAATTCTTCTAATGCCTGATCCAAATAGAGAAGCATTGCAGACCCTTTTGCTTTTCCTTAATGAGGTGGCTGGCAATTCTGAAACAAATCAGaTGAATGAGAAGAATCTTGGAGTTTGCTTTGCCCCATCACTCTTTCATTTGTGTGGCACAAAGGAAGATCCATCTTCTCCTAAACGTCAAAAGAGAACACCCATGAACAAAGCATCAAAAGAGCTCACGGATAACTTGGCGGCACATGAGTGCCTTGCGCGTATGATAATGGAAGTGGACAAACTCTTTTCGATTCCTGAAGACACAGTAAAGAACAGTCGCTTTTCCTACATTGAACAAGGCGAGCCTGTTTCCTTGGAGCAACTTGGGAAATCCAAATCCTGCCCAGAAAGTGGTTATCAAAGTTACATCCAGTCCTGTATAGCTGGACTATTCAAGGAAGCAAAAGACAAATTTAAGGGCTGGCTGTCTCAACCATGGTATGATAATTCGGTGGAAATATCATGCAAAAAGGTCAAAGATGGTTATCCCCTAAGACTCTGGAGGTGCACTGTTGAAGTGAATGCCAAACCCGAAGATGTGGTCAGAAGAATTCTTTATGAAAGGCATCTCTGGGATGAAGACCTCGAATCATGGGATGTGATCGAGAAAATTGATGAACACACAGACGTGTTCTTCTATACAACGAAATCCATGATCCTGCAACCAAAACGCCGCCATGTCGTGTTAAGGTCATGGACAGATCTTGATCGAGCAGGTGGGGTGTGCGCTCTGGTGTCCACGTCCATCAACCACTCAGGGGCCCCTCCCTCCAGTGGAGTTACCGCTATTGTTCTTGCATCACGATACCTAGTGGAACCTTTGGGCAATGGGAAATCACGGCTCACGCATATCAGCCGAGTTGACCAAAGGGGAAGAACGCCAGACTACTACAGCAAAGCAGTTGGGCCTTTCCTAGCATCATCAGTGGCCAAAGTGCGGGACACGTTTCAATGTGGGTCGGACGGCCTCGAAACGAATGTGTGA

Transcript

ENSKKQT00000028662

CAACAATTCATTTTGAAAGTATGAGTGAAACTTGTGGAAAAGACAACGGtgatttttgcgtggatttcttAGATGCTTCTATGGAAATCGTCGCGGATTTCGCATCGATGATAGCGAACGAATTAGAAGCCCTGGAGGCTTGTTACTGGTTGAAAGCAGCAGGATTTCCACAGTATGCACAAGCTTACGAAGATGGAAAGTTCCCGATTGATACTGCCTCAGTCATCAAGGAACATGACTTCCTGGACCAGGATTCGATCCAATCCTTGTACAGACGCCTTCAAACACTAAACCGCTGTGCAAAAATGAATCTTCACATCAAGAGTGATGGTTATGATTCAGATGAAGAAGATCTCATTGCCTTAAGTTCAAGGTGGAAACTTCAAAATAAGAATCGTCGTTGGCCAAGTAGAAGAAATGGTCCACGTGGAGGTTTAAGTAGCTCACAAAATGGAATCAACTCATCTGTGAACAGTGTAACAAATGGAAAACAAAGGTCTTTTAGGAGAGACAAACCTGTCACTGATCAGCTGGCACCATTTTCACACTTAGATTTGTGCGTAGCATCAGGAAGAACAAGTTTATATGACAATTTGTCACCGAATCTAAGTCACAGTACACCGTCAATATCAAATGTTGGTAAGGACTTCAATAAGAACAATCGACCACCATGCTCAGTGAGAACACAAAAACGAAATCTCATAAGCAGTGATTTAGGACTGGAATCTTGCAGTGGATCATCAAATGATGCTCTATCAGATTTAGAACGCGATGATGAAATTGGTGATTTACCTGCAGACTTATCAATGCTGCAATCAATCAGAAAATCGGAAAAAGAATGCAATGCCGATATGACACCTTCATCAAGAGCAGAGAGGCCTAGAGTACGGTGGCACAGCTTTGAGAGATCTGTGAAACCAGAAGTTCGTGTTATGTCTCCAAAAATATGCGACCTTACAGCAGGACAGCTGGCAGTCCTCAGAAAATATTCACTTTTGAAACTCACTGCCCTAATGGAAAGACATACACACTCTCACAGAGGCATGTGGAGCTGGTCATTTCCCCATTTCTTAAAGAAGTTCAAGTCTCCAGACTATAGAGATAGAAATGTTTTTGGAGTTCCTCTTTCCATTGTCCTTCAAAGGACAGGCCAACCTCTTCCAAGATCTATACTCTTTGCGATCAATTATCTTCAGAGAACAGGAGTTGATGCTGTCGGCATTTTTCGAAAGTCAGGTGGAAAACAGAGAATAAATCACCTCAAGGAGATGATTGAAGGAGATCCAGAGAACACCGACTTTGAGGGTCTGTCACCATATGATATGGCTGACATGCTGAAGCAGTACTTCAGAGAACTTCCAGAGCCTATCTTGACCTCCAAGCTTGCAGAGACATTTATATCTATTTTCTCAAGTATTCCTTCAAACTCCAGAATGGAAGCAATGCAAGCAGCAATTCTTCTAATGCCTGATCCAAATAGAGAAGCATTGCAGACCCTTTTGCTTTTCCTTAATGAGGTGGCTGGCAATTCTGAAACAAATCAGaTGAATGAGAAGAATCTTGGAGTTTGCTTTGCCCCATCACTCTTTCATTTGTGTGGCACAAAGGAAGATCCATCTTCTCCTAAACGTCAAAAGAGAACACCCATGAACAAAGCATCAAAAGAGCTCACGGATAACTTGGCGGCACATGAGTGCCTTGCGCGTATGATAATGGAAGTGGACAAACTCTTTTCGATTCCTGAAGACACAGTAAAGAACAGTCGCTTTTCCTACATTGAACAAGGCGAGCCTGTTTCCTTGGAGCAACTTGGGAAATCCAAATCCTGCCCAGAAAGTGGTTATCAAAGTTACATCCAGTCCTGTATAGCTGGACTATTCAAGGAAGCAAAAGACAAATTTAAGGGCTGGCTGTCTCAACCATGGTATGATAATTCGGTGGAAATATCATGCAAAAAGGTCAAAGATGGTTATCCCCTAAGACTCTGGAGGTGCACTGTTGAAGTGAATGCCAAACCCGAAGATGTGGTCAGAAGAATTCTTTATGAAAGGCATCTCTGGGATGAAGACCTCGAATCATGGGATGTGATCGAGAAAATTGATGAACACACAGACGTGTTCTTCTATACAACGAAATCCATGATCCTGCAACCAAAACGCCGCCATGTCGTGTTAAGGTCATGGACAGATCTTGATCGAGCAGGTGGGGTGTGCGCTCTGGTGTCCACGTCCATCAACCACTCAGGGGCCCCTCCCTCCAGTGGAGTTACCGCTATTGTTCTTGCATCACGATACCTAGTGGAACCTTTGGGCAATGGGAAATCACGGCTCACGCATATCAGCCGAGTTGACCAAAGGGGAAGAACGCCAGACTACTACAGCAAAGCAGTTGGGCCTTTCCTAGCATCATCAGTGGCCAAAGTGCGGGACACGTTTCAATGTGGGTCGGACGGCCTCGAAACGAATGTGTGACAAACAGAGAAGAAATGCATGGACCTAACCCACTGAAAGAGGAACAAACTACACAAGTGCGTGGAAAGAAAAAGGTTTCTTCGTTGGTGTCAGGAGTGGAAAATAGTGCCACTGGGGCAAAAAGTGCGGGAATGGGTAACGCCGCCCACAAGAGCGACAACACTGGTCCAGTTATCTCTAATTGTCCAGGCTAGAAGGCACTCTGTCACACTGGCTGGAGAATATTATAGCAGGGAACCCATACAAGTTGACTTGGGATTTTAGGGAGAACCGTTTGGCTCTTCCTTGTCAAAGAGTTGTTCTCCACGAGAATATAATTTTGAAGATGTACAGCATATTTAAAAGGTCTCCATACGTAACTCAATTGTgtaccattttacacagaatcaCGACGTCTTTTCTCAAAACACAGCTGGTAACAGAATTCGTTAAGTTTAGAGCGTTTTTCTAAATCAAATTTATTCGGTAAGGACATGAGAAAGATATTTCGGAAAAACAGTTTTATTTATATTACGGCAAAGCATGCCGAACGTCCAGGGCGATATTGGAGTTATATATTTTTTCCCCATTGagatatttgttttgttttgtggatGATATTTTGATCATCCTGGGATGTTTTTTCTGTCAGAGTATTCCTGACTGACATGACTTTACTAAGGCGTTAAGAACTTAATTTTAAAACCAACGATAAATTATGCGTctctttgcatttttaattaatttattgcCCTTTGCTAATGGTTATTCACGAAAAGCCTAATATATAAAACACACATGGGAAATCGATCactattagaaaaaaaaaaacaacattaaacaCGAGAAGTATACTTTTTATGGTTCGCTTAATTCAATTAAAAACTATTTATTTCACCTATTATTCTATCTCACCCATTTAAGTTTGAGATGTCCTAGAAATCTCAAGTTAAGAAAAACTTGAGACCTTTGCTCAATTAATGAGGAAAACCTTTGCAAAGAAACTCTTCGGAATCGAGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q923Q2	StAR-related lipid transfer protein 13 OS=Mus musculus OX=10090 GN=Stard13 PE=1 SV=5
Q9R0Z9	Rho GTPase-activating protein 7 OS=Mus musculus OX=10090 GN=Dlc1 PE=1 SV=2
Q9Y3M8	StAR-related lipid transfer protein 13 OS=Homo sapiens OX=9606 GN=STARD13 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001725 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF01852 all species →	START	START domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013761 all species →	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR002913 all species →	Domain	START domain	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12659 all species →	RHO-TYPE GTPASE ACTIVATING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0035023 all species →	Biological Process	regulation of Rho protein signal transduction	Interproscan
GO:0008289 all species →	Molecular Function	lipid binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20632	DLC; deleted in liver cancer protein	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.