Gene detail

Detailed information of ENSKKQP00000026858.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_029181740.2, prolyl 3-hydroxylase 1-like isoform X1 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKKQT00000031170

GAAAAGTGGGGCGAAGCTGTCTCGCTCTTCGAAAAGGCTATCGCTGATTACAAACACGAAAAGGATGTGAAAATTCATTGTAGAAGAAATTGTCGCGATAAATATCGCGCCTCTTCCTCTTCTCTGAACTTTATGAAAGATCGTGAATTAGACTATTATCGTTACACGATATATTCTCATAAATGTTCGCAGCAATGCAGAGAAAAGTATCTTGGAAAAAGAACTAAGGTTTCTCTAACTGTGAAGAAGGATTTTGAGTCGAGAATGACATATGGATATCTTCAATTTGCTTACTACAAGGTGGGAAGGAATATTGACGCAGCAAGAGCTGCCTACACATGCACAGAAATCCAGGCTCAGGATGAAGCCATGGCAGACAATGTTAAAATCTATAAATCTATGCCTGGCATTCAAGAAGCTGGTATCTATTCATTAGAACCTACACTTCACCAAGAGAATTATTTTAATTCTGCCAAGCTGTATGAAGCAGAGAAGTGGGAAGAAGCCATTCAAGGCTTTGAAGATGCATTGAAGGAATATTTCATTGCTTatgaaaactgcaaaataatGTGCGAAGAGGAACGAGAGCAGAACAAGATTTTAAGCCGGTCTGGTTTGTTTGGTGTTCATGTTGATGTTCTCCAGTGCCGCACACAGTGCCCAGATCAGCTGAGAAAAGTCAAGGGAATTTATGTCAAGAGCTACCTTGCAAGGCATTTTAATTATTTACAGATGTCCTATTTCAAAGTGGAGAAGTTATGGGAAGCTGCTAGCTGTGCTGCATCCTTTTTGctgtttgaacctgatgaagaTACAATGATAGACAATCTGAGATATTTCAAGCATGCTTTAGGACATGACAGCATCAAAATAACAGCCAGAAAGgaagcaataaaatattataaagaGACTGCAATAGAGCGAAAGCTCTTGCAAATGGCAAACGTTTATATGGCTGAGGCTGATTTTGATGATAACGATGAATGGTTCCATGATGGGATTGACGATAAAGCTAACATTCAGGACACGAATATTGAGGATTTGGTACAAGAGGAAGAGACTACATACAGCCTGGAAAAATTGTGGGGTCTTGGACCACTTAAGGAAGAACCACCAGTTGAAAATCCAGGAGATGTAGTAAACTTGGAGAGATACAAGGGATCAAAGATTTTAATGACAGAGAAAGACTTGAATGGGACTTCAAGAGTCGCTGTTGAAGGATTTGCAACAGAGGAAGAATGCAAAATGTTAATCAAACTGGCTGAGAAGACTGCCAAACTGGGAGATGGATACGACACTAGAAATTCAAATGACAAGCCATTTTCCTTCACAGATAAGGAAACCTTTTCCGGTGTTACAATACTATCTGCATCAGAGGCTGCCTTAAACGGGAAGGCATCCGTGGAAGAAGTTGAACTGTATTTTAAGTTGAGTGAAAAAGTCCGTCACTTCACAGAAGATTACTTTCAACTTGATACACCTTTGTACTTTTCATATTCTCATCTTGTTTGTCGGACCTCTGTAATGGATCCTAATGGACACAATGAATTCCACTTGAGCCATCCGATTCATTCCGACAACTGCCTTCTTAACCGGGATGGACTGGGCACGTGTCCCAAGAGATCACCAGCGTACACGTGGCGTGACTACAGtgctttaTTGTATCTGAATGGTGATTTCACTGGTGGAGAGTTTCTCTTTGCTAACCCCGATGAATCCGTACAGGCAAGACTGAAACCGGAATGTGGACGAGCCGTAGCTTTCTCTGCTGGTCAGGAGAATCTACACGGAGTTGCCGGAATTCGCAAAGGTCAAAGATGTGCCTTGGCTTTGTGGTTCACCTTACGACAAAAACGCAACGAGACACAACGCCAGGCAGCATGGGATATTCTTCAAAAAGCAAAGGAACAAAAGCAGCTGAAACAATTGCCGCTTTTTACACCGGAAGTAGCGACTCACATGGAGCTATAATTAGTGTTTCCAAATTTATGTCCAGGTGCCAATGTCGCCTTTTTACCAGAAACCAGTGacgttcttttttaattaattttatactTTATTTCTTCCTTCACCAACGTCAGAAAAACCGTCAAATTGATGAAACTGTGTGGTTTTTTTCTGGCGTTTTTATATTATACATAGGACAAAGACGTCTAGTCTAAGTTAAAATTATGTTGATATCTCTTTATTGTTGCTGTTATAACAAACGTC

Protein

Uniprot

Uniprot term	Description
Q32P28	Prolyl 3-hydroxylase 1 OS=Homo sapiens OX=9606 GN=P3H1 PE=1 SV=2
Q3V1T4	Prolyl 3-hydroxylase 1 OS=Mus musculus OX=10090 GN=P3h1 PE=1 SV=2
Q9R1J8	Prolyl 3-hydroxylase 1 OS=Rattus norvegicus OX=10116 GN=P3h1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13640	2OG-FeII_Oxy_3	2OG-Fe(II) oxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005123	Domain	Oxoglutarate/iron-dependent dioxygenase	Interproscan
IPR039575	Family	Prolyl 3-hydroxylase	Interproscan
IPR044862	Domain	Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR006620	Domain	Prolyl 4-hydroxylase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14049	LEPRECAN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0032963	Biological Process	collagen metabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005506	Molecular Function	iron ion binding	Interproscan
GO:0016705	Molecular Function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	Interproscan
GO:0031418	Molecular Function	L-ascorbic acid binding	Interproscan