Gene detail

Detailed information of ENSKKQP00000027079.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_044182546.1, neutrophil cytosol factor 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKKQT00000031404

AATCTAGTAATGGCTATAAAACTGCTGCAACTTAATTCTTTTCGaacttttaaacaatttttaagGACATTTTCGCTGCGTGACGGTCACGACAGCGTCTATTGCAGACAGCGCTTGAAGGGCAAACATGTCAAGTTCTTGATCTCTTTGTTATGTTAAGGTTTATTCGGCCTCGATTTTCCGGTTCCTTGAACATGTAAATCCGAAGTGCGggggttaagtgttttgaatatttattttccttttcaaagaCCGGCTGTAGTTCCTTCTTGGTCAAAACTCGCGAGAAAAGATCGAAAATGGCGGAAATGTCTATGGTGGAAACACTAACAATTTGGAACGATGGCGTCTCTTCAATGGACGCTGGCAAATTTGAGGACGCTCTGACGAAATTCAGCGCTCTTGAAGGAAGAACAGATTCTTCGCAACAGTTAATTACTTCGGGCAGAAATCTCTTCAACATTGGACAAACATACCTCGCTCTTGGAGAACTAGAGAATGCTGCTCAGtcaTTCCAAGCATCAGTGGACAAGGACAAAATGATGGCAGTTGCTCATTTCATGTTGGGAAATGTAAACCTTGCCTTAAACAGAGATAAAGAAGCATTGCAGAATTTTACTGATTCTCAGTTCTATTTGCGTGGGAACAAGTTGATTAATTACCAACAACTTGGATTGAAGTTCAAACTCTATCTCTGTgagATTTTGGCCAACAGAGCCATTGCGCACTCAAGATTGGGTGATACCCAAGAGGCAAAGAATGATTTTCTGCAGGCACTGCAGGCAAAGGTAGAACCACGTCACAGTGTTATTGAAGATTCCTTACTTTGCTGGCAGtCTGGGGAAAATGTTGAGCCATTGATGGTGCCGTCACATGCTGTTTTTACACCTCAAAAGAAACAACTTGATGCcatgaaagggaaaaaaaattatttaggaCAATCCAAgGTTGTGGCGGCTCATGATGTTACGAAATTTCCTGATTCAAGACCAAAGACCCCGACTCCTTCGCGTAAAGTCATTGAAAACGAAAAACCAGCTGAGGAGAATGGGCAAGCGACAAAAGGAGTTGCTACAACCAGACACGCATTGATGCAAGACTTGCGCAAGAGCGACACACGCAAATCTTTGAAACGAGTGCAGATGCCTTCGGAACCGCCAAGCCGACCACTGCCGACTGCTACCGATCGGCCGAGTAGTCCACGCCGACCTCCTCCGGAACTTAGGCCTTCGTCTCCAAGGACGTTACCGGTAAGGATTGGAGCTGAGTCGCGTTCGCCCCTCTTGccaagaaagaaaaattcagaagATAATTCTCAAAGTGGCCAGCGACTTTCTGGGTTTGAACTTAAGCCCCCGGATAAACCGCTTCCACCGGCGCCGAAAAAAAGCCCTATTCCCCAGCGAAAAATCTCTCAATCCAAGACTCGTGACGTCACAGTTCAGCTTATTCTTACTCGTTCCATCAAAGTTAATTCATCGGCTTCGGCTTATGACCTTCTTCGTGCTGCCGCTGAAAAGTTCAATATGCCTGAAAATTCATTGGGATTGTGGTACAAGAAAAATGGTCAGCTGTCAGCCCTCGAAGACGAAGATTTTGAAGGAATTCTAAATTCCCCAGCGGATGGGAGGGGAACAATTTATTGCTACGAAAATAAAGAATAGATGACATTTCTTTCAGTCTTCCGCAGGATAGGTATATTTCGTAGCATAAAATTGCATTTgcctatttcaaaatattttagttGAAACAAATTGCCAAGGAACACAGGAATCGTGGCGCTTTTTAAAGCTGCGGAAGCTGAAGCGCAAAATTCGTCGTTCTTATCTGTTAACGAAATTACGGTGGCTATGGTAACGGTCAAAAATCGGataatctgattggtcaacgaGATAAAAATCGTGCGGCACGCGCAGTACGTACTTTAAAACGACTACGGGAATGAGAaggacaacgccacaaatcagtaatttgattggttaaatgaggagaagtaatcgtgctacacgtgtggcacgctttttggtgcaatattTTGACGTTGTCTGACAAATGACgatgtgaaattttcatatttgaggttctgaccaGAACGCGAGcccacaacagcaaatcttccATTCTTTACCTTTGTTTAAAAGCATTCGTGTCAAGCAaacgtgaccaacatgaaaTAACGACAACACACTTAACCTAACACAAAGTCCTATTTtcatgtgacgttttcgttgcagcggCTGTCGCAGCTTCTTAAACTACCTACTAGCATGGAGAGTTACGACAGCTTTTGCTGAACTGTTATTCCATgttcttcgctctgacgaagcgctaacactcgaaacgtcagctccgTTAcgatctcttcacggtggaaatttaacATTATGACTTTGTTTCATACCaagttttagttttattttctcCAGCGACGCGACTCCGCAGTTTCCTTAGAAGTAACCTTTTATTCCATGTTGTTCGCTTTGAACTGAACGAAATGGGAGAAGAACTGAACGTAATGGGGGAAGTGTCCTTTCCGTTGATTGGTACAAGTGGTTTTGATTTAAAGGAACGGAATACAATTTAGAATTACCTCTGCGGGTTCAcatcgtcagaacctcaaatttgaaaattttacgtCTTTCTTTGACAGACTACGGCAAAGG

Protein

Uniprot

Uniprot term	Description
P19878	Neutrophil cytosol factor 2 OS=Homo sapiens OX=9606 GN=NCF2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13432	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR051864	Family	NADPH Oxidase Activator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15175	NEUTROPHIL CYTOSOLIC FACTOR 2, NEUTROPHIL NADPH OXIDASE FACTOR 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016176	Molecular Function	superoxide-generating NADPH oxidase activator activity	Interproscan
GO:0042554	Biological Process	superoxide anion generation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08010	NCF2, P67PHOX; neutrophil cytosolic factor 2	-	Membrane trafficking	ko04131	deepkoala