Genomic Location: not available for this species
NR annotation: XP_029179396.1, LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PDZRN3-like [Acropora millepora]
Species abbreviation AAUST · all data for this species · gene families
| CDS |
| ENSKKQT00000033465 |
| Transcript |
| ENSKKQT00000033465 |
| Protein |
| ENSKKQP00000029125.1 |
| UniProt accession | Description |
|---|---|
| Q69ZS0 | E3 ubiquitin-protein ligase PDZRN3 OS=Mus musculus OX=10090 GN=Pdzrn3 PE=1 SV=3 |
| P68907 | E3 ubiquitin-protein ligase PDZRN3 OS=Rattus norvegicus OX=10116 GN=Pdzrn3 PE=1 SV=1 |
| Q9UPQ7 | E3 ubiquitin-protein ligase PDZRN3 OS=Homo sapiens OX=9606 GN=PDZRN3 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004854 (this species only) |
| Ubiquitin family | E3|E3 activity RING|RING · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 activity RING|U-box · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13923 all species → | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF00595 all species → | PDZ | PDZ domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR051971 all species → | Family | E3 ubiquitin-protein ligase PDZ domain-containing protein | Interproscan |
| IPR001478 all species → | Domain | PDZ domain | Interproscan |
| IPR003613 all species → | Domain | U-box domain | Interproscan |
| IPR036034 all species → | Homologous_superfamily | PDZ superfamily | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR017907 all species → | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR15545 all species → | PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004842 all species → | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K15682 | PDZRN3_4, LNX3_4; ligand of Numb protein X 3/4 | EC:2.3.2.27 | Ubiquitin system | ko04121 | deepkoala |
