Genomic Location: :...
NR annotation: XP_044171811.1, protein polybromo-1-like [Acropora millepora]
| CDS | |||||
| ENSKKQT00000033990 | |||||
| Transcript |
| ENSKKQT00000033990 |
| Protein |
| ENSKKQP00000029648.1 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| Q90941 | Protein polybromo-1 OS=Gallus gallus OX=9031 GN=PBRM1 PE=1 SV=1 | ||||
| Q86U86 | Protein polybromo-1 OS=Homo sapiens OX=9606 GN=PBRM1 PE=1 SV=1 | ||||
| Q8BSQ9 | Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=4 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | HMG |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01426 | BAH | BAH domain | Domain | Interproscan |
| PF00505 | HMG_box | HMG (high mobility group) box | Domain | Interproscan |
| PF00439 | Bromodomain | Bromodomain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001487 | Domain | Bromodomain | Interproscan |
| IPR018359 | Conserved_site | Bromodomain, conserved site | Interproscan |
| IPR036427 | Homologous_superfamily | Bromodomain-like superfamily | Interproscan |
| IPR001025 | Domain | Bromo adjacent homology (BAH) domain | Interproscan |
| IPR037382 | Family | Remodelling complex subunit Rsc/polybromo | Interproscan |
| IPR037968 | Domain | Protein polybromo-1, Bromodomain 5 | Interproscan |
| IPR009071 | Domain | High mobility group box domain | Interproscan |
| IPR036910 | Homologous_superfamily | High mobility group box domain superfamily | Interproscan |
| IPR043151 | Homologous_superfamily | Bromo adjacent homology (BAH) domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR16062 | SWI/SNF-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0003682 | Molecular Function | chromatin binding | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0006368 | Biological Process | transcription elongation by RNA polymerase II | Interproscan |
| GO:0016586 | Cellular Component | RSC-type complex | Interproscan |
| GO:0043044 | Biological Process | chromatin remodeling | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11757 | PBRM1, PB1; protein polybromo-1 | - | Chromosome and associated proteins | ko03036 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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