Gene detail

Detailed information of ENSKKQP00000029738.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_029183423.2, F-box/LRR-repeat protein 5-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKKQT00000034080

GAATGTGGCAGCCATTGTTCTACGCGTGCGCCTGCATATCCAACGGACCTTCAACTTCATGCACGTATTATCTTCTGCTGCCTCCGCTGGCTCCCCACCTCCACCCGCTGGAGAAAAGAAACCGATTCTAGTTATGACGCAACCCCAACAGGCATGATACATTGCGGCGCGCGAAGAGGTTTACCattgtattttgttttcaagatggcggtgtgTCATTACCCATGTCCGGATGAAATAGATGTATTCAGAGGACCTCACTTGCGAATGAAACAGCTTGTTTACGAAGCATTTGAAAAGCTTTCCACAACCAATTTTAAAGATGATGTATCTCTTGCTAGTCTTCTCGAATACATCAACTCCACTTTTGCAGAACTGAAACACCATGAGGAGATTGAGGACAGCTGTATTTTGACACAGCTACAACATCGtctcataaacaaacaaatacttGCTGTTGTTAATGAtgttcacaaagacaatcgtgTCCTTGAGATCTTATCACTGACTAGAAAAGGGCTAAAGAGCACATCAAAAAGCAGACCTCGATGGAATAGACACACATTTGAGGACAGGCTGAAAGAAGCATTGCAATCATTTCAAAAGGATTTCTTACCACACATGAAGCATGAAGAAGAGGTGTTCCAGCCCCTCCTCATGGAATATTTCACTTTTGAAGAACTGAGAGAGATCAAAACAAGAGTTTTGCACCGTCATGCAGAGTTTAGAGAGCATGCCAAAGCCCGCGTCACAGATAGTTCCTCAGATGAAGATAATAATCAAGCTAAAGTTTCACGGGGTCAAGAAAACACAGACTATGATTTTGAAATACCGGAATCAGAAAGGAATAAAATTCAACTAGCCTTCAAGGGGAGGATTTCTGATACAAAGTCAGGCTATGCTATTAATGTTGACAGTTTGAAGGACACAAAATCAAGCACAAATgataatttttcaaagacatCAAGTGTTAAAAatggacaacaacaacaacctctGCTTTTGCACTTTCCATCTGAGATAACCTTGAAGATTTTCTCTTATCTTGGACCCAAAGACTTGTGTCAATGTGCCCAGGTTTGCTGTCAGTGGTCACAAGCTGCTAAAGATGGTGCGCTATGGAGGGAGCTTTATCCTGTCCGCTGGATTTTCAAGAAGGACTGGCGATTTGGTTGTGATACCGAAGACAATAATTGTACTTGTGATTGTGATTCTGAGGTTCAAATTTCTGACGGTGTACCTGTTAACAGTGCTTACACTGATTCAGATGCCTACAAGGAGAGTTACAATGATCACGAGTCTCTTCCCTGTGAGAATGACAGTATGACGCCATCAGAGATGCATCAGCTGCTGGGTTTTGTGCGGTACCTTGTCCCTGTAGTTGGACCATTTGTGTGGTTGTTGAACCTTGGCTGTTGTCCAATGTTGAGTAATGGTTTGgCATTCAAGATACTGTCCCATTGCCCAAATGTGAGGCAACTGATTTTGTCCCAAACTGCAGTGTCTGACTTTGGTTTGAAAGGATTATTTAGAAAGGGCTATCATCTTCAACTGCAGTATCTTGATGTCTCTGGTTGCAAGAACATCACAGACAAGACCTTGTTCAAACTGTCATCATCTCTGGGAAAGCTTCCAGTTGATGATGAAATATCTGACATTGAGGAGAGCAGCTGTGACTGTCATGCTTCGTGTTCCTGCATGCAGAAGACCAGTTTTGCCCAAGAGCCAGCTAGACGAGGGCTTCTTTATCTGGGTCTGTCTGGCTGCTACAAGATTACTGATGAGGGCCTAAGGGCCTTAAAGGTCTGGTAACTTCTTGCCAGAAAACATGTCCTCATTGTCTTCACCCAAGTCCATGGTTGATGGGTAGTTCAACCCTATTCCAATAATATCCAAACAGCCATGACGAGGAGGTTTACAGGCTCACCAGCAGATTGCTTTTCATCAACCTGAATAACTGTTCCATTCTTAGCAAATCCTCCACACCTTGATTTTACAAACATTTAGCGGCTATGGAATGAGGTGGTTTCCCTTGTTAGAAGGCCTACTACAGTCTACTTGTCTTTGAGGGAATG

Protein

Uniprot

Gene family

Uniprot term	Description
C0HAC0	F-box/LRR-repeat protein 5 OS=Salmo salar OX=8030 GN=fbxl5 PE=2 SV=1
Q5XGI3	F-box/LRR-repeat protein 5 OS=Xenopus tropicalis OX=8364 GN=fbxl5 PE=2 SV=1
Q8C2S5	F-box/LRR-repeat protein 5 OS=Mus musculus OX=10090 GN=Fbxl5 PE=2 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|F-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01814	Hemerythrin	Hemerythrin HHE cation binding domain	Domain	Interproscan
PF12937	F-box-like	F-box-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR012312	Domain	Hemerythrin-like	Interproscan
IPR036047	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR045808	Domain	FBXL5-like, hemerythrin-like domain	Interproscan
IPR001810	Domain	F-box domain	Interproscan
IPR006553	Repeat	Leucine-rich repeat, cysteine-containing subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46731	F-BOX ONLY PROTEIN 15	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0006879	Biological Process	intracellular iron ion homeostasis	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10271	FBXL5; F-box and leucine-rich repeat protein 5	-	Ubiquitin system	ko04121	deepkoala