Gene detail

Detailed information of ENSKKQP00000030481.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029189109.2, F-box/WD repeat-containing protein 7-like isoform X1 [Acropora millepora]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

ENSKKQT00000035144

ATGGAATCGATGACCATGTTGAACGGTTTTGCGAAACACAGACCACTTAGCACAGTTGAATTTGAACAGCAGCTTGATTATATATGCCAGTGGATGGAAAAATGGAGCGATCAAGTGCGGCGTGATTTGATTGAGTTACTACTTCCAAGATGCAATCAGAAGCAAATTACATTTCTATGGACAGTAGTTGAGCCAACACTGCACAGAGACTTCATGTACAGTTCACTAAATGCCTTTCCAAAAAGCTCATTCAGTACTGTGTCTACGCCACTTTGCAGCGAAGTTCACAAGAAACTTGGAAAGCCAAGATACCGTGCCTGGAAGCTGCACAGAGTGCAAAGTGCCATCCTGCATGATGAGGATGATGTAAAAGCGTGGACATCTGAAGCTGTCTTACCAATTGTCAAACCTCCATCCTGTGTGTCACCCACACGACAAATCACAAAACGATCACCATCACCTGACAGAACAGAATCTAGAGGCTCCTGGAAATCAAAGTCCACTTACTTTGGAGTCAAGTTACCGGGAATTTCCACCATGACAAGTCAAAGCAAAACTCTGCCCAGATTTGCCGCCAGTCGTTCAGCCCCACCCGGTGGGGGAACCAAAACGGCTTGCCAGCATGCGGTGCGGCGTCACATGCAAAATGAAGACAAGAAAGATTTTCCCAAGAGCTGCTTTCCGAGCAGTGGCGCGAAAACAGAAGACGTACCAACATGGCAAAGACTGTACAAGTCACAATCCTGTCCCAGTGTATCTAACCTTAGATCTTTCAGTCATCGGAAGCATGTGCGTACAAGGACCGAACAGAATTATAGCGCTGGTCAGTGTCCAGTGCCGTTTCCTGAGAACGCCCAGTGTCTTGTTCAGTGGTTTGAACTTCATTGGAGTGGTTGGCAGAAAAACGAATTTCTTCAAATCTTTCTTCGAGTTCTCGAACCCAGCGAATTGTACTTTCTCTCTGGGCTGCTAGCTgTCAAACAGTATCGAGATTTTATTGCTCTTCTTCCTGAGCCGTTAGCTCTACACATCTTGTCTTTTCTTGTTCCAAAGGAACTACTTTTTGTTTGCCAGGTGAGCAAAACATGGCGCCGTCTTGCGTCCAGGGATGAATTGTGGCAGTCGAAATGCCAAGAAACTTACGTTGCTTTTAAACACGCTTGGAAGATCTTATCCAACTTTTCAGGTGTACCGCTTAGCGTGCCAGCAGTGTGGAAAGAAATATTTCGAGAAAATCTAAACTTGAAGCGCAACTGGGCAAATGGTCGCTGCAAAGTTATGGACATGGTGGGACACAAGAACAaTGTGCTTTCTGTTTGTGGCTACAAGAACTTCATCGCTACTGGAAGCTTGGACCGGACAATAAAAGTTTGGGATGTAAACACAGGGACTTTGATCCAAACCTTCACAGGTCACACGCGTGGAGTTTGGAGTATTCGCTTTCTTTCAAAGAGTATTATAATAAGTGGATCATACGACAAAACAATTCGGctcTGGAGTCTCCGGACAAAGGCGTGTGCAAGAATACTGATGGGTCACGATGGACCTGTATGGGCAATTGAGCGTAAAGAAGATATCCTTATTAGCGGGTCCAGCGACAAAACGGCAAAGCTATGGAACATTCGCCAATGTAAGCTTCTTTTCTCGCTTGTGGGACACAATGGCTGTGTGTTTTGCGTGGATTTGGATGGCAGTTGCAAAAGGGCGTTCTCTGGTTCCGGAGATAGGaCTGTCAGGGTATGGGATGTGTCCTCAGGGTTGTGTCTTTCATCGTTTAATGTGGGACAGTCAACGGACTGCACAGTCACGACTGTAAGCTATGACCATGGTTATCTTGCAGTCGGATCAGGGACCATGGTATCCTTGTGGAATCTGACTACTGGGGACTGTGTTCATGAATTCAGCGGTCATAAGAACAGGGTGGAATGTGTTAAGCTGAAGTTTATGATGGTCAACGGAAAAAAAGAAGCAGGCTTGATTGTGAGTTCAGGAAAGGATGGGCTCATAAAGTACTGGGACATTGAACAGGCATCTTGCATTCAGACCTTAAGAGGACACCGAGATAACGTTAACAGCGTCCACGTCGATTCCACTAGAATCATCAGCGTGTCCTTTGATCATCGAGTCCGAGTGTGGAATTTCAGCACTTGA

Transcript

ENSKKQT00000035144

CAAGAATAGCAACAAAAATGCTGTTGCTAACGGAGGGGCTTTGATGGTCGAGGATAGATACATTCTGAACATGAGCCTTCGTTGGCTCTCTCCTGAACCAGTATGACTTAGATAAAGCAATTACTCTTGAGTAATGGGGTTTGTGTGAAGACTGAACTTCAAAAAACGCGAAAATGAGACCAAGGAATCAACTTGAACGCGAGCAGACAACACGCAGTTCATGGAATCGATGACCATGTTGAACGGTTTTGCGAAACACAGACCACTTAGCACAGTTGAATTTGAACAGCAGCTTGATTATATATGCCAGTGGATGGAAAAATGGAGCGATCAAGTGCGGCGTGATTTGATTGAGTTACTACTTCCAAGATGCAATCAGAAGCAAATTACATTTCTATGGACAGTAGTTGAGCCAACACTGCACAGAGACTTCATGTACAGTTCACTAAATGCCTTTCCAAAAAGCTCATTCAGTACTGTGTCTACGCCACTTTGCAGCGAAGTTCACAAGAAACTTGGAAAGCCAAGATACCGTGCCTGGAAGCTGCACAGAGTGCAAAGTGCCATCCTGCATGATGAGGATGATGTAAAAGCGTGGACATCTGAAGCTGTCTTACCAATTGTCAAACCTCCATCCTGTGTGTCACCCACACGACAAATCACAAAACGATCACCATCACCTGACAGAACAGAATCTAGAGGCTCCTGGAAATCAAAGTCCACTTACTTTGGAGTCAAGTTACCGGGAATTTCCACCATGACAAGTCAAAGCAAAACTCTGCCCAGATTTGCCGCCAGTCGTTCAGCCCCACCCGGTGGGGGAACCAAAACGGCTTGCCAGCATGCGGTGCGGCGTCACATGCAAAATGAAGACAAGAAAGATTTTCCCAAGAGCTGCTTTCCGAGCAGTGGCGCGAAAACAGAAGACGTACCAACATGGCAAAGACTGTACAAGTCACAATCCTGTCCCAGTGTATCTAACCTTAGATCTTTCAGTCATCGGAAGCATGTGCGTACAAGGACCGAACAGAATTATAGCGCTGGTCAGTGTCCAGTGCCGTTTCCTGAGAACGCCCAGTGTCTTGTTCAGTGGTTTGAACTTCATTGGAGTGGTTGGCAGAAAAACGAATTTCTTCAAATCTTTCTTCGAGTTCTCGAACCCAGCGAATTGTACTTTCTCTCTGGGCTGCTAGCTgTCAAACAGTATCGAGATTTTATTGCTCTTCTTCCTGAGCCGTTAGCTCTACACATCTTGTCTTTTCTTGTTCCAAAGGAACTACTTTTTGTTTGCCAGGTGAGCAAAACATGGCGCCGTCTTGCGTCCAGGGATGAATTGTGGCAGTCGAAATGCCAAGAAACTTACGTTGCTTTTAAACACGCTTGGAAGATCTTATCCAACTTTTCAGGTGTACCGCTTAGCGTGCCAGCAGTGTGGAAAGAAATATTTCGAGAAAATCTAAACTTGAAGCGCAACTGGGCAAATGGTCGCTGCAAAGTTATGGACATGGTGGGACACAAGAACAaTGTGCTTTCTGTTTGTGGCTACAAGAACTTCATCGCTACTGGAAGCTTGGACCGGACAATAAAAGTTTGGGATGTAAACACAGGGACTTTGATCCAAACCTTCACAGGTCACACGCGTGGAGTTTGGAGTATTCGCTTTCTTTCAAAGAGTATTATAATAAGTGGATCATACGACAAAACAATTCGGctcTGGAGTCTCCGGACAAAGGCGTGTGCAAGAATACTGATGGGTCACGATGGACCTGTATGGGCAATTGAGCGTAAAGAAGATATCCTTATTAGCGGGTCCAGCGACAAAACGGCAAAGCTATGGAACATTCGCCAATGTAAGCTTCTTTTCTCGCTTGTGGGACACAATGGCTGTGTGTTTTGCGTGGATTTGGATGGCAGTTGCAAAAGGGCGTTCTCTGGTTCCGGAGATAGGaCTGTCAGGGTATGGGATGTGTCCTCAGGGTTGTGTCTTTCATCGTTTAATGTGGGACAGTCAACGGACTGCACAGTCACGACTGTAAGCTATGACCATGGTTATCTTGCAGTCGGATCAGGGACCATGGTATCCTTGTGGAATCTGACTACTGGGGACTGTGTTCATGAATTCAGCGGTCATAAGAACAGGGTGGAATGTGTTAAGCTGAAGTTTATGATGGTCAACGGAAAAAAAGAAGCAGGCTTGATTGTGAGTTCAGGAAAGGATGGGCTCATAAAGTACTGGGACATTGAACAGGCATCTTGCATTCAGACCTTAAGAGGACACCGAGATAACGTTAACAGCGTCCACGTCGATTCCACTAGAATCATCAGCGTGTCCTTTGATCATCGAGTCCGAGTGTGGAATTTCAGCACTTGATCGCTTTCAGATGTTCTAGATGGTCTATTTTTACTTTTGTTGAGACAAGCATTCGTTTGCCCTGAGTCCTGAGGATGTAGCTTGAGGGTATTGAGAAAAGCGTAGCGAATGACTTGTTTGCATATAGTTATGACGGAACTAAAGTTGTAGACATGTTTTGGTTCGTTCAACGAGGAGAGCTGTAATCTATCACCAATCTAAATTCTAGGAAGAAACCGGAGAGCTTCCTAATCTTTATGACCGCACTCCAAGTTCAAACAGTCAATGGCGAACACATAGAAGGCAGAATGGAATAAAGTTAGAGAtgtgaacaaaaacaaatttagcTGAAAAAATAACCAGCGTAAAATTACGTCACAAAATGATCCAGCTACAAAGTACAGTTGCATGCAGTGGTaactctctctctccctctctggTACATCATATCCTCGTATGTTTACCTCTGTATCGTCAAAAATCATCCGTTTAATTTGCCTCAGCTGGACGCATATGTTGTACAGGAAATGCCTTTATTTCAAGATCATTTTTTGGGGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F1MNN4	F-box/WD repeat-containing protein 7 OS=Bos taurus OX=9913 GN=FBXW7 PE=1 SV=3
Q969H0	F-box/WD repeat-containing protein 7 OS=Homo sapiens OX=9606 GN=FBXW7 PE=1 SV=1
Q8VBV4	F-box/WD repeat-containing protein 7 OS=Mus musculus OX=10090 GN=Fbxw7 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006122 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|CDC20 · all ubiquitin genes in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|DWD · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12937 all species →	F-box-like	F-box-like	Domain	Interproscan
PF00400 all species →	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001810 all species →	Domain	F-box domain	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR019775 all species →	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR036047 all species →	Homologous_superfamily	F-box-like domain superfamily	Interproscan
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR051075 all species →	Family	SCF complex subunit WD repeat-containing protein	Interproscan
IPR020472 all species →	Repeat	G-protein beta WD-40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19872 all species →	UBIQUITIN LIGASE SPECIFICITY FACTOR/HREP PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10260	FBXW7, SEL10; F-box and WD-40 domain protein 7	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.