Gene detail

Detailed information of ENSKKQP00000031395.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_044172157.1, ubiquitin carboxyl-terminal hydrolase 8-like [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000036421

ATGCCTTCACCGGAAAAGAAGACATTGAAAGCTCTGCATTTAGCCACCAATCTTGAAGATCTCAACAAGTTAGCGGATCTTAAATTATCAGTCAACCAAACTGCGAACCCGCAGACCCTCATCAAGTCAGCTGATAAAGTTTACTTAGAAGCAAAGGACCACTACCTGGAAGGTGACGAAGAGAGTGCTTATGTGTTTTACATGCGTTACTTCAACTTAATCACCTTGATTAAGAAGAGCAGCAAGTATAAAGAGAAAAAAAAATTCTACGATGACTTGCTGGGAAAATCAAAAATCATAAAATCAATAGAGCATGCTGAAGCTCTGCAAAGCAGCCTTTCTAAAAGGTATGAAAAGCTTAGTGCGGAGAAGACAGCCAAAGCAAAAGCACAGGAAGAAGTCAGGAAAAAGGAGGAGGAAGGCAAAATTTCACAgattttttcaataaatttttttcCCAGTGACAGTGGTTTTGATAGTGATCTTGATTCCCTGTTAAATGGAAATGGGATTAGTTCTGCTGTTGATGTCTATCAAAAACTGAAGGTCAACCATAGTTCCATTCTTCTGCCCAAATCATCTGAAAATACTGCTGGAATACCTTTCACTGAACCTGAGACTAAACCGAATGTTGCAAATAGTGGACTTGTACCCTTTGTGTCAGCGCAAGATCTATATGATATgctgaaagaagaaaatgtgTCCAAGGTGCTGGTCATAGATTGTCGCCCACACTCTGTATTTGAAGAGAACAACATCAACTGTCCTTCATGCATTAACATACCTTCTGAGTTGTTGGATTCAGGGGTTTCAGCAGGCAGCATTGAAAGGCGCTTGAAGGAAGACACCAGACAGACCTGGAATAGAAGAGGAGAAAAAGAGTTTGTTGTTCTAATGGATGAATCCACCAAAGTTAATGACATAACTCCTGAATGTCGAATCCAGAGGCTCAAAGATGTAATATATAAATTTGACTCAAACAGCTCATTAAAGAAAGAACCCCTGATTCTTGATGGTGGGTTCCATAGCTGGCTGTGGCACTATCCTTCTGTCGCCTTGAAACCTGAGTTACCAAAGTTGATTCCACAATCTACGGTTGTGAAACACTTGCCAGTGGATTTATCAAACTTGGACTATCCAGAAGTTCCTGAAGAGAGGACACCACCAGCCGAACCACAAATTTCAACAGCGCCTGAATCTGTCACAAAGAATAACAGCCCCTTGCATCAAATCCACCCCTTGAATGGAATAGAAAAGAGCCATGGGTCATTTGTAAGCCCAATTCATGGGATTGAAACGACAAAAATGCCACAACCGCCACCTGCTATCCCACTTCAGCCAGTTTCTCAAAATGGTGGTGTTCCATTCCCAAGTCCTTCCAATGTAACACAGCCTGTTTCAACAATTCCAGCATCTTCCCAATCAGTTCCACCGTCAGGACAACGTCCTAGTCAATTTGGATCAGCAGGTCTTTGTTATACAGAGGGATCAGTTTCTAAGGCAATCTCACCAAATTCCTCAGGGACACCAATACCAGGCGCTGTGCCTGGTACAACAGCACCGCATCCTGCACATCAGCAAGTAAATCAGCACGGTAATCGATCGAGCCTAATAATGTCACCCTTTCCATCGTCATCTGTCCAAGCAACTTCAGTTGTTTCCCAAACAGTTTCATCAACAGGTGCACTATCTTCAAGTTCTCTAGGCGCTCAACCCGGCCAGCCAGGTATTCCAACAGCACGTCCTCTTGCTTTACAGACCACCACCCCATTCCATAACCAATCAACTCATGATGGATCTTCATACACTATGTCACGCTCAGGTTCAACCGTCCCATCGGTTCCAGGGACTCGACCTGTCATTGTGCAGTCCAGTTTTCCTGCAACGAGTTTGGCCCCCAATGTTCCTACCGCGACCTCTACGCCACTGTTACCTGCCTCTTCAAGTACAGGACCTCAACTACCCTCACAGCAACTTGGGCCTTCACAAAGCGGCAATAATTCTGCGCCCTCTATTCCTGTTCAGAGTTCACATCAATCAGTGCAACATTTGCCTCCTGGACAGCAATCGCAAGTACACTCAATCAACCCAATTCCTCATGGTGGTGAGCAGATCCCAAAACAGTCCATTACATTAGCAACACAGCTTCCTAAAGCAGCTTCGCCAACTGGCCCAAAGACAGAACCCAGAAGTAATCAGCTTGAACCACAAACGCCTCTAAATGTCAGTCAAGCTACTCCGCATCAGAATATTCCAGGAAAATCATCAAATTGTCAAGTTTTACCTGGGAATTCGGCTAAGCCGCCAGTCAGTGAATTGTCACAACCGAGTGGCCAGCATAAAAAACCCAACCAACCGTCTGTTTCTAACAAAAAAAGCAACTATTTGACAACACCTGGACTTCCACCTGGTTGGGAAAAGGTTGTCGATGGAGAGAAACTATACTTTAAAGATCACAACACGCAAACTACCCATTGGGAGATGCCCAAAGTGGTCACGACTAGTTCAAATGTATCAACGCCACAATCTAGTGTGCCGCAGAAAGACCAGTCTCAAATGAAAAGACAATCTTCCGTTGAAAGGCCAAAGTTGCACAGGTCACTATCCTCTCCAAATATAGCAAAGCTCTTAGATCAGAGGTCGTCGGGTCCAAAGAAACCAGTGGTGGATCGTATGTCCAAGCCGGATTACGAGCATGCAGCTCCAGGGAGACCCACCATTAACCGCAGTGCAAAGCCATTGTCTGCCAACCAGCTTGACGGCCTCTACCCAAGCCACGGCGGCATTGGGCCAGCTCTGACTGGACTTCGTAATCTTGGAAATACTTGCTACATGAACTCTGTTGTGCAGTGCTTAAGCAGTGTGGCTCCTCTGGCCGCTTTTTTCATTTCGGGAGTTTTTCGTGAAGATATCAACAGGACCAACCGCGATGGAACGAGAGgcGAATTGGCAGAGATATTTTCAGTGCTCGTCAGAGTTTTACATTCTGGACAATTCAAGTGTGTCTCCCCTAATGAATTCAAACGAACAATTGGAAAATTCAAGTCGCAGTTTTCAGGATACGACCAACAGGATTCTCAAGAGCTTTTGGCCTTTTTGATGGATGGCTTACACGAGGATCTTAACAAGGTGAAACAAAAGCCATATCTGAAGGCGCCATCAGATGACCTCGATCCTGAAACGGCTGCCAAGATTGCATGGGAAAATCACAAAATGAGAAACGCTTCAATTATGGTTGAACTGTTTGACCTTTTTTTTGCTTCTTCGTATGAAagaggaaatctttctttttATGACAAATGGTTTTGTCCAAATTGCCGACAAAGAAGGGAGGCCACTAAAACCATACAGATTTGGAAGCTGCCAGCAATTCTAGTGGTGCATCTCAAACGATTCCAGTACGAAGGAATGTGGCGACAGAAACTTCAGACCAATGTGTCGTTTCCCATGTCACAAGTCGATATGTCAAACCATATAGTGGGGCCAAAGTGGCAAAAACCTTACCAACTGTTTGCAGTTTCCAATCATTATGGCACTATGCATGGAGGACACTACACTGCCTTTGCCAAGAATGTTTATGACAAAAAGTGGTATAAATTTGACGACCAATACGTCACTGAAATGTCGCCCAGGGAAGTTGTGGTAGGTATCgttcttatattttgggATACTTACTGGCATTTTAGGCTAAGTAGGTTCTTAATTAGATTCTTAATTTTTACTGAGTAG

Transcript

ENSKKQT00000036421

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P40818	Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens OX=9606 GN=USP8 PE=1 SV=1
Q80U87	Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus OX=10090 GN=Usp8 PE=1 SV=2
Q13107	Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens OX=9606 GN=USP4 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001487 (this species only)
Ubiquitin family	DUB\|USP\|USP · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00443 all species →	UCH	Ubiquitin carboxyl-terminal hydrolase	Family	Interproscan
PF00397 all species →	WW	WW domain	Domain	Interproscan
PF08969 all species →	USP8_dimer	USP8 dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001202 all species →	Domain	WW domain	Interproscan
IPR050185 all species →	Family	Ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR001394 all species →	Domain	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Interproscan
IPR018200 all species →	Conserved_site	Ubiquitin specific protease, conserved site	Interproscan
IPR036873 all species →	Homologous_superfamily	Rhodanese-like domain superfamily	Interproscan
IPR028889 all species →	Domain	Ubiquitin specific protease domain	Interproscan
IPR015063 all species →	Domain	USP8 dimerisation domain	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21646 all species →	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004843 all species →	Molecular Function	cysteine-type deubiquitinase activity	Interproscan
GO:0016579 all species →	Biological Process	protein deubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11839	USP8, UBP5; ubiquitin carboxyl-terminal hydrolase 8	EC:3.4.19.12	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.