Gene detail

Detailed information of ENSKKQP00000031551.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_044182309.1, dnaJ homolog subfamily C member 2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKKQT00000036626

GCTTTTCGCTGATCGGTTTGCGGTAAGGGGACACCATTAGCGATGAGAGCACTCTTTAGCCTCTCTTTTGTCAACCGTTCTGGATTGTTTGAGAAAGATGGCATTTTAAACTGCAGATATTTTAAAAGCAAGTTGgcaaagtttcaaaaaaaaagtCACGAACTCGCGCCATTCGGTTCGCTAACTGCGCACACGCTTTACATCGAACCGCTGGCGTACAAGTACTTACGTGCTCGCTTAAAATGGCGGACTGATGTGCGAAAATTTTAATCAAGATTTTTCTATTTCTCTAACTAAACATGGCTCTCCCCCCTTCTGCTGACGGCGAGAAAGCCCTGGTAGTTTCTCGTTTATCAGCACCATCTTCTTTACGAATTGAGCCAGTCGGACGATGGTATGAAGCGTACCTTCGACGTCAGCATCACGGCCTTCGTTCTCATCATTCCAGCTCAAGATCAAGCTCATCTTCTGCTTCCGAAGGAAGTCTTTCATCtgatgaagaagatgaagatTTTCTCCTTACCCTGGACCCATCAGAGTGGAAGCAACAAGATCATTACAAGGTTCTGGGGCTTGGAAATCTCCGACACAAGGCCACATTTCAAGACATCAAAAAAGCATttcGAAAGAAAGTGTTGAAACATCACCCAGACAAGAAATCTTCAAAGACTGATTCCAAAGAAAGCAAGCTTTCTGAACAAAGTCTGTTTGCCTGCATAACAATTGCAAATGACATTTtaagcaacaaaacaaagcgACGAGCATATGATAGTGTAGATTCATTCTTTGATGATTCAATTCCTTCAGTCAGTGCAAACTCAAAAAGTAATTTTTTCGAAGTGTTTGGCCCTGTGTTTGAAAGAAATGCAAGATGGTCAAAATGTCAACCTGTAATATTATTAGGAAACATTGATTCTACGTTTGAAGAAGTtgataatttttataatttttgGTATAATTTTGATTCCTGGAGAGAGTTTTCTTACCTTGatgaggaagaaaaagaaaaaggagaaaaCCGTGATGAAAGAAGATGGATTGAAAAGCAAAACAGAGCAATGAGACAGAAACGGAAAAAAGAGGAAGGAACTCGAATGAGGAATTTAGTTGATAATGCCTATGCATGCGACCCTAGAATAAAGAAATTCAAAGATGacgagaaagaaagaaaactcgcAGAAAAGAAAGCGAAGAAAGAAGCTGCTCGATTAGCGGCGGAAGAAAAAGAGCGGcAAAGACTTGAAGCGCTGGAAAATGAACGAAAGCGTatcgaaaaagaagaaaaagaagcaaaGGAGCAAGCAAAGGCCGCTAAAGCGGAAAAGGCCAGGATCAAGAACTTGATGAAAAAGGAAAGCGAAACCATAGCAACGTTAATAAAGGATTACGACTATTTTGTCGTGAACGAAGACGACAGAGTTCGAGAAATGGAGGCTTTGGATCGTTATCTTCAGATAAGTTCTCTGGAAAGTCTGCAGTGCTTCAGAGACGGCCTAGAAAAAGCGGATTCCAAAGAGGCTGCTAAGATCTTATTTGCTAAAGAGATGGACCAAATGAGAGAAAAGATTCGACAAGATGCTATAGCGGAGACACAACGGGCCTCGAAAAAGAAAGATGAGGAAGAAATCACTGATGATTGGACTGCAGAACAGAGCCAGCTTTTGATCAAAGCTGTGAATTTGTTTCCTGCCGGGACAGCATCTAGGTGGAAAGTGATAGCTGATTACGTTAACATGCACTCTAAAACGGGAACTTTGCGAGATTCAAAACATGTCATAAAGAAAGTCAAAACATTAAAGAAACTTGATCCCAGTCACAAGCAGGAAGTTAATCGAAACGCTTTCTCGAAGTTTGACAAAGGTGTTTCTCAGAGCAAAAGTCCTTCAACAAGTAGTACGCAATCTGACCCAACAGTAAGATACAATGGGACTAGTTCTCCTAACAGTTCTCAACTCACCTCAGAAAAACCGTGGACTTCAGAAGAACAAAGACTTTTAGAAAATGCCCTTCGCACTTACCCAACGAGTACACCTGAAAGATGGGAACGGATAGCGGAAGCCGTACCAGGGCGAACGAAGAAAGAATGCATGAAGCGATACAAGGATCTTGTTGAAATGGTCAAAGCGAAGAAAGCCGCAGCCCAAAGCAAAGGACAAACAGCTTAGCTCTACAAACGAAATAGCAATTGATGATGACaacctggctccagttgttcaaacgctggatagcgctatccactggataaatcactatccactggataactcaattggttttgctagtttttatccgctggatagtgatttatcccgtggacagcgctatccatcgtttgaacaactggggcctgatgtTTTATTGGAAAACTATAGAGAATTTCTCCCTGTCCCGAATTTGCGACTGCGGTTCTTTTTTTCATCCTTTGTTTTAATggatttttgtaatttgtccGTTTTATAGGCCATCTAATGAAACGTTTGGTTTATATCAAACACAATGGGTCGTTGTCCTTCTTTCAACGGAGctcgttttaattttttcagaACCTCTAATCATTTATGGCATGAATAATTACATCGAAGAGACGACAAAGAGTCCATTTAAGACTCATCGAGGTGTATGCTCTGGTTTTGACTTGATTTCCTCATTTTCATGCTTCATCAGCGGCTATCAGTGTGCTTCTAGTAGCGGTCTATTAGAAAGAAACGTCATAACACAACAGCGAAGGCATATTACATTCACATTTCTTTATCAAGAGGTTTATAAAGGAAACGttgacaacctcgttccctcgttctctttcttcttccttttcccTGGATGggagaagggaagaagagagaccctgggaacgagattgaacTTGACTTTACTTAAGAATATTTCAATTATCAAATTCGGGGTCGTAAAGCAATTCTGCCAAGTCGTTTCAAATATAAAGcactaata

Protein

Uniprot

Gene family

Uniprot term	Description
Q1RMH9	DnaJ homolog subfamily C member 2 OS=Bos taurus OX=9913 GN=DNAJC2 PE=2 SV=1
Q4R8H2	DnaJ homolog subfamily C member 2 OS=Macaca fascicularis OX=9541 GN=DNAJC2 PE=2 SV=1
Q99543	DnaJ homolog subfamily C member 2 OS=Homo sapiens OX=9606 GN=DNAJC2 PE=1 SV=4

Gene family	Subfamily
Transcription Factors Family	MYB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16717	RAC_head	Ribosome-associated complex head domain	Domain	Interproscan
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan
PF00226	DnaJ	DnaJ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001623	Domain	DnaJ domain	Interproscan
IPR032003	Domain	Ribosome-associated complex head domain	Interproscan
IPR001005	Domain	SANT/Myb domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR036869	Homologous_superfamily	Chaperone J-domain superfamily	Interproscan
IPR017930	Domain	Myb domain	Interproscan
IPR044634	Family	J-protein Zuotin/DnaJC2	Interproscan
IPR017884	Domain	SANT domain	Interproscan
IPR042569	Homologous_superfamily	Ribosome-associated complex head domain superfamily	Interproscan
IPR018253	Conserved_site	DnaJ domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43999	DNAJ HOMOLOG SUBFAMILY C MEMBER 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006450	Biological Process	regulation of translational fidelity	Interproscan
GO:0030544	Molecular Function	Hsp70 protein binding	Interproscan
GO:0043022	Molecular Function	ribosome binding	Interproscan
GO:0051083	Biological Process	'de novo' cotranslational protein folding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09522	DNAJC2; DnaJ homolog subfamily C member 2	-	Chaperones and folding catalysts	ko03110	deepkoala