Gene detail

Detailed information of ENSKKQP00000036077.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029193884.2, LOW QUALITY PROTEIN: transcription factor E2F8-like [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000041757

AATGAATGTTATTGGCTGTAAAACGGAGGAATGGTGATTCACAAAATCCCCGCGTAAAATTGAACGCGCCAAAAAATTCACAACCGCTACACTCGCACTGTCTGTGAAGTTGTGAAGTAATGCGAATTAATAATTCAGCCGCTTTAAATAACTCTGGCCTAGCTACCAGCAAATTTTCTCCCGTATGAATCGTGCAAGTTACTTTCCTGTGTTCTTCATGTGGAAAACGTgacgattttttttattgaAGCGTTATGGAATCAAGCCAGTTTTTATTAACACCTCAAGTTTGGGAGACGAAAGATGACCAAATGAACCACAACTTTAGGGACTGTGATGATAGTGAGTACGATGGCTCATCGCAGCCAAATCGACTGGTTCGCTATCCTTCCTTAGCGGAGCTTACAACGATAGCGACAAACTGTGAAGGTGCTTGTGTTGTGTCTGAAACTTTGCCCAGAAAGGTAAAGACATCAATGCCAGCACCAAAAGCTGAAGATTGCAAATATCAAGTGACAAGTCCTTGGAATCAAGACGTCCCAGCAACTCCACCGAAAGCGGACAACTCGACAAAGATGTCCTCGAATCAAAGCGGTGACGATCCCCTAACTCCAACAGCTAATCTTAAAATGCTTGTCAGTGCTGCAAGTCCAATAATTCGAGATCGGGAGACAAAGAAAAGGGAACTTTTTCCTGGTCAAAATTCTAACACTTTCGAAGCACTACATGCCGCCGCTTTGAACAGTCTGGTTTCAAATTCAAACCGAACTTACACGCTTGAAAGCGAAAGCTGTTCAAACGAAAACTCATTGCCGGTGGGTTCTGGAGAAAACAAGATAACCATAAGCCGAAAAGACAAGTCGCTTGGACTTTTATGTCAGAAgtttctatcaaaatacCCAGAGTATCCTAAGGTGAATGAATTCATTGAAATTggattggatgatgttgcaaGAGACCTAAGTGTTGAAAGGAGGCGCATATATGATATTGTCAATGTTCTTGAAAGTGTGGAAGTTATCAGTAGATATGCAAAGAACAGATATGTGTGGCATGGTAAATCAAGACTACCAAATACCCTTATTAAACTAAGGAATTATGCTAAATCACAAGGATTCAAACTAAAGTCATCAATTGGAGAGAAGGAAGCAAATTCcaaagataaagaaaataaaaaggagAAGgcaaagaaaaatcaaattGCACGTCTTTCTGCAAAATGGCCCTTAATTCTTCCCAAGGACCCCAATACATCGAATCAGCTGGCAAGATCATTTGCAGGCCAAGACCAGAACCTTATGCCACCCCCGTCAACTctagaaaataaaagcaacacCAGTAACagtaaaagaacaaaatgtaAAGcagATACCATCAATGATTACTGTAGGAAAGACAAATCCCTTGGAGTTCTCAGCCAAAAATTCTTAATGCTGTTTTTAGTTGCTGAGACGGGATATGTAACACTAGAAGATGCTGCCAATGTATTAATAGGGGAAGAAGAGGAAGGCCAGACAAAATATAAAACTAAAGTGCGTAGACTCTATGAcattgccaatattttgtcaaGCCTTCAGCTAATAGAAAAGGTGCATATTCACAGTATTCAAACAGGACGAAAACCTGGCTTTCGTTGGATAGGGATTGATCCCAATAAGCTGGAATTAGTGGCTTACACTCAAGaaaaaattcaaaattctcCAGCAGCGAAAAGACTGCGTGCCAAAAACACTGATGGGGAGGAAAGTGCTGTGGGACGCTTTATCAAACGAAGACCCAGTCAACAACAAATTAGGGCGAGATCGGAGGACAcagacatgaaaaaatgcaaactaCCGCGGTCGCGGTCTGAGAGAATTTTAGGTACTAAGAGCAAGGCTCTCTTTGAAAATGAGGACGATGGGTTTTCAGTTCACGAGATAGCCAATTCGTTTGGTGCAGATCCATCTAGTGGAAGCCCAACGGAAGCAAAATTTCGTGCTGATTTGCAGAAACTCCATCAGCAGTACCCAAATCATATCCTTTTCAAGTGTGAATTAAGAACCGAAGTTTTGCTGCATTTTACTTACAATTAGCGATAGGTAAACGCTGCAATAATGAC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RIX9	Transcription factor E2F7 OS=Danio rerio OX=7955 GN=e2f7 PE=1 SV=2
Q96AV8	Transcription factor E2F7 OS=Homo sapiens OX=9606 GN=E2F7 PE=1 SV=3
E1BE02	Transcription factor E2F7 OS=Bos taurus OX=9913 GN=E2F7 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003793 (this species only)
Transcription factor family	E2F · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02319 all species →	E2F_TDP	E2F/DP family winged-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR015633 all species →	Family	E2F Family	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR003316 all species →	Domain	E2F/DP family, winged-helix DNA-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12081 all species →	TRANSCRIPTION FACTOR E2F	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0090575 all species →	Cellular Component	RNA polymerase II transcription regulator complex	Interproscan
GO:0005667 all species →	Cellular Component	transcription regulator complex	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000036077.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.