Gene detail

Detailed information of ENSKKQP00000036630.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_015751956.1, PREDICTED: fibroblast growth factor receptor 2-like isoform X4 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSKKQT00000042359

GTCACTTCTTGACCAGTTTTTAGTGAAGTGATTTTGGTAGTTGGAACATACTGGTAAAAGTCTCTTCTATTTTCCATGGTGGCCCCTTTGGGCTTCCGTATGTTGGGCTAGTCTGGGGAGTGGCGGAATCAACGAGCTTATCTCACTCGGTTCCATTTCACTGATCGTTGGTATTCTCGGACTTTGCATCACGGGACGTCAACAACTTCCATGTTGGTTCAGTTGGTTCAAATTCGGCTCTGCACAGAGAGTTTCTGCGAATATCGTCTGCCGCGTTGGTGTTTTGTTGATCGACAAAGATGTCTTTCGTTTTATATAGTATGCTCTTTGGAATCCTCGTATTTTGCTACGAAACAGAAACTGCTACCTCAGCATTTTTATTTACACCTCCCAATCCCTCCTATGCAGTTGAAGGGAAAGACTTCACTCTTAAGTGGAACTATACTCTTGATGGCAGCCTGATCGCTGTAAGGTTTTCCAATGTTACTGGAGGTGGCGATGATCCCATTGGATCAAGAAGTGGTCCTGGTAAGATAAACAGCGTACAAAAGTATGCGGCACAATTCAGGGCACAAGCAACAAACAATAGAGCAGAGCTGACAATACTAGCAGTGCAATTATCAGATGAGGGAACTTATAAACTGACTTTGGTTTCAAGCGCTCCTACTTTTATTTCAAACGAAGCCAAAGTTATTGTGCATTCTTCTCCAAGCAACATTATCTCAGATGACCAAACCATAACAGCACCCGCTAAGTTGACTTTAAAGTGCTCAGCTGATGGAAAACCAACCCCAACAATATTCTGGACAAGAGTCTCTGATAACACTAACGTCTCCATGCCCTTGAATATCACTGGGGGAAAGAATGAAGAAAGTTACCAATGTACTGCTTATAATGGGATTGGAAATCCTTTGAGCAAGGCTGTCAAGATCACTATTCGATTTCCTCCAATAGTTACAGCTGCACAGAAAATCTATGTTGGCCATGAGCAGTCTGCCTCACTCAACTGTGCAGTGGAAGGAAACCCAACACCTACAATTTCTTGGAGTCCTTGTGATGTAGAGAATCTTCTCTGTAATAAGCAGTACTTGAGTATTCCTAAAGTGAAGACTGGATGTGCCAACTACACCTGTACAGCAACCAATGCCCTGGGTGCTGATTCAGCAACCACAGTTCTTCTTATTGGAGGAAAGAATATTTACTTGAGGCTGAGTGTAAGTGGAGAATGTGACAAAAACGTCACTGTTTGGAAGACACTAGAGAAAGAGTTTCCCAGGGTCTTTGCCAATACCACTCAAAATTACTCTGGAGCAGAACTACTCAGGGTAAGGTGTGGAAGCCTGATCTTTGATGTGGTCTTCAAATTCAGCACTGTTGTTGCAGAAGACGAAATTTTTTCCATAATTCAAAATGCTGCTGCAAATGGAAAGCTTAGAGAGTTAAGTGTGACTGTATCACATGATGTTGGAATTCCACCTGATGAACAAACTAAAGCCACAGCCCCAACCAGCATTACTTCAAAATCTGATGACCATTCCTCATCTAATTTGATAGTTACAGGTGTTTCCATTGGAGTTGGGGTTCTCATCGCTGTTGTTGTTGGATCGGTGATTTTGTGTTTGCTTATGAGAAGAAACTCgagaaaacaaaacaccaaagGCGATTACGAAATGACCCCAAAAGAACGAACTGAAGAATATGAAATTTCTCCAGGGAGACTTGTcaaaACTGAAGATGCACCAGAAAGTAGTATTTCGAGACCTACATATGTGAACTTGCAAGAGGTAACTCTGCATTCTAACATGGATTCTGGTCCACCCCACAATGAATATGCGCCACTTGATTTGAGGACACGCTCTTGGGAAGTAGCAAGAGAGGATGTGATAGTAgaaaagatcattggtaaaggGGCTTTTGGTCAGGTTGTCAAGGGAACGGCAAAGAACCTATCGTTCAGGTCTGGCACAGGAAATGTTGCCATTAAGATGATAAAAGCAAATGCTCGTGAATCAGACAAGCGAGACTAGAAATCagaactggagctgatgaagACACTCAAGCCGCATCCACATGTCATCAAACTGCTGGGATGTGTCACTGAATCTG

Protein

Uniprot

Uniprot term	Description
Q05030	Platelet-derived growth factor receptor beta OS=Rattus norvegicus OX=10116 GN=Pdgfrb PE=2 SV=2
P05622	Platelet-derived growth factor receptor beta OS=Mus musculus OX=10090 GN=Pdgfrb PE=1 SV=2
Q6QNF3	Platelet-derived growth factor receptor beta OS=Canis lupus familiaris OX=9615 GN=PDGFRB PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR051427	Family	Nectin and Nectin-like	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23277	NECTIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005912	Cellular Component	adherens junction	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0007157	Biological Process	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Interproscan