Gene detail

Detailed information of ENSKKQP00000037101.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_044182249.1, U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein-like [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8K194	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Mus musculus OX=10090 GN=Snrnp27 PE=1 SV=1
Q8WVK2	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Homo sapiens OX=9606 GN=SNRNP27 PE=1 SV=1
Q6DDA4	U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein OS=Xenopus tropicalis OX=8364 GN=snrnp27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007892 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08648 all species →	SNRNP27	U4/U6.U5 small nuclear ribonucleoproteins	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013957 all species →	Domain	U4/U6.U5 small nuclear ribonucleoprotein 27kDa protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31077 all species →	U4/U6.U5 SMALL NUCLEAR RIBONUCLEOPROTEIN 27 KDA PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008380 all species →	Biological Process	RNA splicing	Interproscan
GO:0071011 all species →	Cellular Component	precatalytic spliceosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12846	SNRNP27; U4/U6.U5 tri-snRNP-associated protein 3	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.