Gene detail

Detailed information of ENSKKQP00000038210.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_044170945.1, gamma-tubulin complex component 3 homolog [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000044443

ATGTCATCATatataagtatatttttttattattattattcttttctttttcatagtcATTTTGCTCCAACAGTGGCAACAGATGAATTCAGAGTGGTGGAAAGAATCAAGAGAAAACGTAAGTCTCCCAAAACTCACAAAGGCTTGTGTGAGCATATTccTGTGCTGAAGAACAGATGGGCCATTCTGTACTTTTTGATGAGTGTTGGTGAAGATTCATCATCAAAACATTCACATGGCCAGgGATCAGGTGGTGGCCCCTCTTTCTTCAGTCGTGGACTTCCAACCTACCTTACATCCACACCTGCAGTGCCTGGAGAGGCATCCAGTCGACCTTCCAGTCATACCCCTGGTATTCTGTCCATGACACATGCCACTGAAAGCAGCTCTGGTATCAGTAGTGTAGCAACCCGATCCTCCAATCCCACTCCCATACCTCCTTCCCTTGTCCCAAATTATGGTCCAACACCTTCAGTACATTTTGCAGATGAAGTAATGACTCATGAAGCAAATGATGGTTCTCGTCTGGCATCCCTTGTGGCCCAGTCTTTGAGTATCAGCCAGAGTAGGGTACGTAACACTGGCACTGTTAGTCAGTCCATTGGCACAACACCTGTGGTGCGATACATGAGTTTTGGGAATGATTCACAAAACACTTCACATGAAGTATCAGAAGCCATTCTTCTTCGAGAGATCATCTATATATTTCAGGGGATTGAAGGAAAGATCATCAAGCTGGACCAATCTAATGATGCTTACCGTATTGATCCTAAGCTAGGGGTACCTAGATCTGTGCGTGACCTTGTGAACAAACTTGCTGAGCTTGGCTGGCTCTATCGCAAGATACGAAAATATTTAGATGCACATGCAGGGGATAAAGCCATGGGATTGGTTGGTCAAAGCTTTTGTGCTGCATTACAACAGGAACTCACAGAGTACTACAGGCTGCTAGCTGTTCTGGAAGGGCAACAACAACTTGGGGATGCAGGATTTGTAGGGGAAGGGGCTAGTGGAAGTTTGACACTGCGTCGACTGATGGTGTGGACCTTTGACCCATTAACGAGATTACAGACACTAGCTGCTCTGGTTGATGCTTGTAAAGGAAAGAAAGGAGGTGCATTGTTATCAGCTCTTTATTCCAACATGCAGCATGGAGATCCTTTTGTCAAGTCACTTGTCAGACACATACTCAATCTGGTTTCTCGCCCAATCCGTCTTATCCTTGATCGGTGGATTTATGAAGGGGAGCTGGATGATTTGTACAATGAGTTTTTTGTTGCTGTGGATTATGATACTAAAGATGATCGACTCTGGTATGAAAAATACAGCATCAGAAAACCTATGCTGCCCTCCTTTATATCATTTGAGCTTGGTACAAAGATTTTAAATATAGGAAAAACCATCAACTTCATAAGACGTGTTTGTGAAGATCGCAGTCCCATCAGGGGAGGGGAAGAGAAAGCCTTGGATTCTATCAGATCACAGGAAGGATCAGCCACAGCCCAGCTGACAGCTGAAGAAGAATTTGGTGGTGTGGCGCTTCAAGAAACAATAGACACAGCGTATAGAATAACAAGCAAACGACTTCTTGAAATCTTCTTTACCAAGTACAAATTTGTGGATCATTTGAGGGCTTTGCGACTGTATCTTCTGCTTGGACAAGGTGATTTTATTAGGCACCTGATGGACCTTCTCGAGTCAGACCTTGCAAAAGCAGCCAGTACGCTTTACATGCACAACCTGACAGGAGTATTAGAAACAGCTATAAGAGCAACGAACGCTCAATACGCTGATCCAGAGATCATCGAGCGTTTGGACTGTCGACTGCTTGAGgtatCTCCAGGTGACACAGGCTGGGATGTGTTTAGTTTAGATTATCATGTTGACGGACCAATCAGCACTGTGTTTACTCCTGAATGCATGATCCACTACTTGAGGATTTTCAACTTTCTCTGGAGAGCAAAGAGAATGGAATACTGCTTGACTGAAATGTGGAAACAACAGATGACAACTCGCAGGATGCTAAAGTCATTGCCAGAGGTATCACCAATTCTACACATGTGCCACATGCTGGGAACAGAGATGATTCACTTTGTTCATCAAATGCAGTATTACATCACTTTTGAGGTATTGGAGTGTTGTTGGGCGGATTTGAAGAAACAAGTAGCAGAAGCAAGTGACTTGGATCATATCGTTGCAGCTCATGAGACATTTTTGGATCAAGTACTAAACCGGTGCCTTCTGGATGCTGAGTCAAGGAAAATGTTAACTCAGCTCCGAGCCATTTTTGACTTGATCATCCAGTTCCAGAATGCTCAGGAGTCATTTTTCTCTGCTGCAACAAGAGAGCTTCAATCGCGGCAAGCGCTGGAGAAAGCTGTTGAAACGAGAGCGGATGAGGGTAAGTGGGGCATGACTGACTGGGATGAGGAGCTTGAAAGGAAACGGTCAGTGAAGTTTGTGGATAATGTTATCCCAGACACCAGAGCACAGCTTAAAGTATTGTCTAAGTCATACCAGGATATGGTGCAGCAGTTTCTTATGATGCTGACCAGCCATCATGATGTCAGCTTAAGGTTTCTCAGTTTCAGACTTGACTTCAATGAGCATTACAAGAAAATAGAACCCAAGCTGCGAAGTCCTCTCACGCATAGGTTCAGCAAGCGTATCAAGACACCAGTCCCTAAAGCTCACCTTCAGCAAGCTTCTGATCCTTCAGACCAAACCCAGTCTTAA

Transcript

ENSKKQT00000044443

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O73787	Gamma-tubulin complex component 3 homolog OS=Xenopus laevis OX=8355 GN=tubgcp3 PE=1 SV=1
Q96CW5	Gamma-tubulin complex component 3 OS=Homo sapiens OX=9606 GN=TUBGCP3 PE=1 SV=2
P58854	Gamma-tubulin complex component 3 OS=Mus musculus OX=10090 GN=Tubgcp3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003694 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04130 all species →	GCP_C_terminal	Gamma tubulin complex component C-terminal	Domain	Interproscan
PF17681 all species →	GCP_N_terminal	Gamma tubulin complex component N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040457 all species →	Domain	Gamma tubulin complex component, C-terminal	Interproscan
IPR007259 all species →	Family	Gamma-tubulin complex component protein	Interproscan
IPR042241 all species →	Homologous_superfamily	Gamma-tubulin complex component, C-terminal domain superfamily	Interproscan
IPR041470 all species →	Domain	Gamma tubulin complex component protein, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19302 all species →	GAMMA TUBULIN COMPLEX PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043015 all species →	Molecular Function	gamma-tubulin binding	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0000278 all species →	Biological Process	mitotic cell cycle	Interproscan
GO:0000922 all species →	Cellular Component	spindle pole	Interproscan
GO:0000923 all species →	Cellular Component	equatorial microtubule organizing center	Interproscan
GO:0000930 all species →	Cellular Component	gamma-tubulin complex	Interproscan
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0005815 all species →	Cellular Component	microtubule organizing center	Interproscan
GO:0007020 all species →	Biological Process	microtubule nucleation	Interproscan
GO:0031122 all species →	Biological Process	cytoplasmic microtubule organization	Interproscan
GO:0051011 all species →	Molecular Function	microtubule minus-end binding	Interproscan
GO:0051225 all species →	Biological Process	spindle assembly	Interproscan
GO:0051321 all species →	Biological Process	meiotic cell cycle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16570	TUBGCP3, GCP3; gamma-tubulin complex component 3	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.