Gene detail

Detailed information of ENSKKQP00000040466.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: BAV53109.1, Tcf/Lef transcription factor [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000046926

CTGAGGTAAAAAACGTTGAAACAAAAAGCAGTCACATTTTACAAGTTAGCTGGCTGGTCACCAAGAATGTTAAAAAATATAATTACACTGACGTCGAAGCCCTCCTCGTTTTTCATTGGTTCCTTTGGCTGATCGCCTGATTAATCACTGTCAATCATAATAGCGGCGCTCTTTGATGTGATTCCTTTGAAGCGCCGCCGACTCCACAAGCTCATATACGGCTACATAACACTTCGGAGTAGAAATAAATTTTTTCGGAGCGAAAGTCGAGGGTTTTTCCCAACAGAGACGAGGCTAAAATGCCTCAACTTCCCACCAATTCCACAGAGGATCTAGGAGCCGTTGACGAAATGAAGGAATACAAACATGAAGACGGCGAAGAAACGGAGAACGGCACTCATCTAGACCTCGTGAACGATATCAAGTCAGACTTGATCAAAAAAGAGACCGAAAATTCAGAGAATCCTAAACCCTCTGGTGCAAGCTCGGCCCCAATTGCCCAGCTGATGTCATTTCCAGATCGTTATAGTAAGCATTTAAACACAGGGGTTCATTCCGGTTACCCTCGCGGGGGTCCAGGTCATACACCACAAGAGGATATCAAACACAATTTGCATCGTGGCCATGGACCAAGACCTGCGGGAATCTTTCATCCTGCTCATCATCACCCTTATGCGACTGCTCCTCCGTATCAATATATGTACCCAGGAAACAAACCTGAGGGACGATTCCACTTTGAACCACCAATATGGCAACCTCATTCGTCAATTATTGGACAACCTTCGTCCCAGTATCCGCCAAGTTATCCAAGCCAAGTTGGACCAACGTCAGCAGGCATCCAGAGACTGAGTCATCCGACGTTAACAGCAGACCCACGTGGGCCTGTCTGTTGCCCACCTCCGCCGCCCAATCAAACGGTTATCAGAACTCCTGCAACATGTGGAGCAGGAAGCTTGTTAACTTCGCAAAGCATTTCAGCGATGGCTGATCATCCAGGAATGGATTTGGCACATTTAAAAGGCCACATCAAAAAGCCACTCAATGCATTCATGTTGTACATGAAGGACATGCGATCAAAAGTGGTGTCAGAGTGTACTTTGAAAGAAAGTGCTGCCATCAATCAGATTCTTGGAAAAAGGCAAGAGAAAAACGGCCAGTGGCATGCCCTCGACCGACAAGAACAAGCAAAATATTATGAAATGGCTCGAAAAGAACGAGCTCTTCACATGCAGCTGTATCCTGGATGGAGTGCAAGGGACAACTATGCGCAACaaggcaaaaagaaaaagcgaAAGAGAGACAAATCGCAAGAAATAACAAATCCAAAAAAGTGTCGAGCAAGATATGGTCTTGATAGACAACTCGAGTGGTGTAAACCCTGCAGACGGAAAAAGAAGTGCATAAGATTTTTAGCTGGCGGAGCAGACCAGGATTTGTCTTTGTCACCACCTGACAACACTGGAAATTTAGAAAGTGAAAATATTGATACAAACGTAGACAGTAACAGTCCTGTGATGATAACTACGACAAACTCCACCACTCCAACCTCATAGCATTTAATATCACAAGTAACtctaaataaattattgtaaagtTGAAATTTTATCACTATAAGAGCCTATTTTAGTAGAAAGTCATTCAAAAAGCAAAACTTGCATTAGTCCTGGCAAAGCaatttaataatgataatcgtaGCAAAGTCTGACGTAAGAATTATTTGgttaaaatattaattattggtATAACATTTTGCAAATGTCATGAAAGTTGAAATAGGTTTAGTATATTTTAGAAATGTGTGACCTTCCTTCTAACAGTTGACCTTTTCATGGAATAACTCCCTATCTTGAAATCTGGAGAGCAGTGAAAAAAtgcagtgtttgtttgaggatTTTGAAAAGGATCATGATGTTAAAAATTCGTGAACATTCAACGTTCAcaaatttttaattattcagAAGTAAATTCTCCTAAGTAGTAGTTCAGCTGACCCTGAGGTGGTTAATACATACCATACAAACTGAGTAACTCAggtcaaaaattgaatttaGTTAACAACAGAGTGGCCTGATTTCTTGGTTTTGTTTGCTGTTTGTCAGCCTCATGAATTAGCGTCTAGTTTtagataattattttttattgccttGCATTTGGTTAGGGAAACTTGATGTTCTAGCTAGTCTGCATGAAGCTCctcaaaaaatatgtcaaaaatCATATATTATGGTTTTTACACCCTTTTTAGCTGAACTGAGACACAGTACTCATTACTTTTGGCCTTCTATGTTACTTTTATCATCCACATTTTAACATATTTCAAACATGACAGCAATTACTTGATAGGAGAGTCTTCaagcaacattttttttcccCGACATTTAGTTGCTTTTAATGTAGCGGATTTTACTTTGAAAGGGTCTGtggataataaattattacatttatTATCACGCTTTTTAATAGAAATCCTCATGGTTAAATGTTATTTTATGGTGTAATTTTGAACTTAATCTAAGAAGCTGGGATTTTCAATCTTTCAGAAATCCATGAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NQB0	Transcription factor 7-like 2 OS=Homo sapiens OX=9606 GN=TCF7L2 PE=1 SV=2
Q924A0	Transcription factor 7-like 2 OS=Mus musculus OX=10090 GN=Tcf7l2 PE=1 SV=2
P91943	Protein pangolin, isoforms A/H/I/S OS=Drosophila melanogaster OX=7227 GN=pan PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004213 (this species only)
Transcription factor family	HMG · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505 all species →	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071 all species →	Domain	High mobility group box domain	Interproscan
IPR036910 all species →	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR024940 all species →	Family	Transcription factor TCF/LEF	Interproscan
IPR027397 all species →	Homologous_superfamily	Catenin binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10373 all species →	TRANSCRIPTION FACTOR 7 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000790 all species →	Cellular Component	chromatin	Interproscan
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0016055 all species →	Biological Process	Wnt signaling pathway	Interproscan
GO:0060070 all species →	Biological Process	canonical Wnt signaling pathway	Interproscan
GO:1990907 all species →	Cellular Component	beta-catenin-TCF complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000040466.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.