Gene detail

Detailed information of ENSKKQP00000040925.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: PFX18406.1, RNA-directed DNA polymerase from mobile element jockey [Stylophora pistillata]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000047552

ATGGCGTCGCTTCGATTACGGCATCAGATCAAGTTTTTCATCAAGTTTACTGATGCTCGGAGGAGACAACTAAATCCAGGCCCAGCCCAACAACTCAAAGTTGCTTTATTTAATGCAAGAAGTTTAGTGAACAAGTCTGCATTCCTCGAAGCTTGGACGATTCCATTAGATCGTAACAATGCTGAACTTTTGATGatcgatattcattattcaaGGGACAAGTCATTTGTGTTTGGAGTGTTTTACAGACCACCACCTAGTGATTCGAAATGCTTAGAAATACTCCAGAGAAACCTAGAATCCTTGTCGCACCTATCAAACATCATACTGGTAGGTGATTTTAACTTTAAAGATATCAATTGGAAGAACAATTTATTCTTGAACTACTCAATTAATTATGAGCTTTTCTCTGACATATTATCTGATAATTTCTTAAACCAAATGGTCCTACAGCCAACAAGAGGTGACAATATACTGGATCTTATCCTAACAAATCACAGCGACATGGTTTCAGATGTAGAGGTTGGAGAACCAATATCTGATCCCAACATTGTTATATTCAAAACAAACGTTAatccttatcaaagaaaatcttCTAAAAGAGAGTTTTATAATTTTGAGAAGGCCGACTGGTCAGGCTTGAATGAATTGTTCAGACATGTGCATGGGAATCGTAAAGGGTCTAACGATCTGACTGTTATCAAGATGGATAATGGAAGCACATTAACTGATGAACGTGAGATTTCTGAAAGCATGAATGAATTCTTCGCATCGGTCTTCACTCGAGAAAATCTAGAGAATATTCCATCATTCGAGCAGATTATTACAGACGATAGTCTTAGTTTTCTTCAATGGTCCGTTGATGAAGTCACCAAGTTACTGAAAGAGCTGAAACCGCGCAAATCTCCTGGGCCGGATGGAATCCatccattgatactaaaaccTTGTGCGGATACGTTAGCTATATCAATTTGTAAGATCTTCAATTTGTCGTTCTCGCTAGGCAAGATACCCGATTGCTGGAAACAAGCTGACATTATCCCGTTACACAAAAAAGGCGCAAAAAATAACTGTAAAAATTACCGCCCAGTCTCATTGACTTCAATTCTTTGCAAAGTGTGTGAGAAAATTGCAAGACAACACCTAGAGGAATTTTGGATAACTAAGGACATTTTTATTCCTAATCAATTTGGATTCATGAGGGGCAAATCTTGTTGTCTCAATGTTGTATTTTTGGATTTTACGAAAGCGTTCGACTCTGTCCCACATGAACGTTTATTATTAAAACTACATGCATATGGTATTAGAGACCCGCTACTATCGTGGGTAAGGAGTTTCTTGACAAACCGTCAACAGCGTGTTGTACTCCGAGGTCATTATTCATCCTGGACAGCTGTCGTATCCGGTGTGCCGCAGGGAACTGTATTGGGACCGATACTGTTCCTTATTTACATCAACGACATCACGCGGAACGTGGAATCCCAATCGAAATTATTCGCAGATGATATGAAAGTGTACAAGGCTCTAAGAAATGTTCACGAGGACACCCAAATATTACAGGACGATCTGAATGCACTTGAACAATGGAGCATTGATTGGCAgttaaggggcTTTAATACAACCAAGTGTGAAGTAATGCGAATCTCACAGAAGAATGACACATCAAGTCCTGGATATCACTTATGTGGTAACAGATTAAATACTGTATCCGAGACAAAAGATCTTGGTATTTACATCACGTCCAATTTGTCATGGAGTCTACAAGCCACCAAATGTGCAAACAAAGCTAACAGTGTTCTTGGCTTTGTTAGACGGACTGTTGGACCAAAAAACCCGGATTTGTTTTCTAAATTGTACAAAAGTCTTGTAAGGCCAATCCTTGAATACAGTTCCCCGGTATGGTCGCCACATCTAAAGAAAGAAATTGCTACTCTGGAAAAAGTCCAAAGACGAGCTTCCAGATTTGCGCTTGGTACAACTGCAAATGATATGTTTCCATACTTAACCAATCGTTAG

Transcript

ENSKKQT00000047552

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000005 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529 all species →	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33395 all species →	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007508 all species →	Biological Process	larval heart development	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0061343 all species →	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000040925.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.