Gene detail

Detailed information of ENSKKQP00000043160.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_015760502.1, PREDICTED: uncharacterized protein LOC107339719 [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKKQT00000050211

ATGTCAaaagaaagaattcacactggaaaGAAGCATTTTAAATGCGAACAATGTGAGAAATATTTTAGGGGAGCAGGGGATTTAAGAAGacacgaaagaattcacactggagagaagccttttaaatgcaaacaatgtgagaaatgttttaatcaacgaggaattttaaaaatccatgaaagaattcacactggagagaagcctttcaAATGCAAACATTGTGAcaaatgttttagggaaggaAAAACTTTAAAATATCATGAAAGagttcacactggagagaagccttttaaatgcaaacaatgtgagaaatgttttaatcaacGAGGAAGTTTAAAAAtccatgaaagaattcacactggagagaagccttttaaatgcaaacaatgtgacaaatgttttagggaaggaAGAAGTTTAAAGTATCATGAGAGAGTCCACAGTGGAGGGatgccttttaaatgcaaacaatgtgagaaatgttttaatcaacGAGGAACTTTAAAAATCcacgaaagaattcacactggagagaagccttttaaatgcaaacagtgtgacaaatgttttagccaatcaggacATTTAAGAACacacgaaagaattcacactggagagaagccctttaaatgcaaacaatgtgacaaatgttttagGGAATTAAGATGTTTAAAATATCATGTAAGagttcacactggagagaagccttatAAATGCAAACAGTGTGACAAATGTTTTCGACAAGCGGCGCATTTAAAGAgccatgaaagaattcacactgaaGAGAAGTCCTATAAATGCAACCATTGTAACAAGTGCCTTAGCAGTGCTCAAAGTTTAAGGAGGCATGATGGAGTCCATTGTAGTAAGAAGTCTGGTGAAAAAAAGCCACATGATAATAATACATGCGACTTAGGGATACATCGTCCCTGTACCATCCAACAAGAGTGTTTAAACCAGAAGGAAGAATACATTTGTTGGATTTGCCAAGAGGATTTAACCAGTGAAAAGCTTCTTtccaaAGGACAAAATTATCTGGATTGGGCTTTAGGGGATATGCTGAATGCGCTTCTGGTAGAGGTGGAACTGCGAGAAGACCTGTGCCTGACTCAACCAGCACGGGTTACAGAACCCAGTGACAAAATTAACAGACGCAGTTCCCAACCAACAGCGAGTGCCTTGTTTACAAGACGAGGAGAGGACAGCCAATGCCCGTTTTGTCGGGGGGGACATCAGCCGGAACAATGCAAGAAGGTCGCGAACATTGGAAACCGTAAGGGACTATTAGTTAAATACGGTAGATGTTTTAATTGCACAGAGAAGGGACATCGCGCCCGTGATTGCAAAATAAGTGCTGaaagaattcacactggaaagaagcattttaaatgcaaacattgTGAGAAATATTTTAGGGGAGCAGGAGATTTAAGAAGacacgaaagaattcacactggagagaagccttttaaatgcaaacattgtgagaaatgttttaatcaacGAGGAATTTTAAACAtccatgaaagaattcacactggagagaagccttttaaatgcaaacaatgtgacaaatgttttagGGAACGAAGAAGTTTAAAATATCATGAAAGAGTTCACACTGGAGtaaagccttttaaatgcaaacaatgtgagaaatgttttaatcaacGAGGAAGTTTAAAAATCGATGAACGAATTCACACTGAAGaaaagccttttaaatgcaaacaatgtgacaaatgttttagggaaggaagaaatttaaaatatcatgaaagaattcacactggagagaagccttttaaatgcaagcaatgtgagaaatgttttaatcaacGAGGAAGTTTAAAAAtccatgaaagaattcacactggagagagaccttttaaatgcaaacattgTGACAGATGTTTTAATCAACGAGGAAATTTAAAAATCcacgaaagaattcacactggagagaagccttttaaatgcaaacaatgtgacaaatgttttaatcatcgaggaaatttaaaaaaccatggaagaattcacactggggagaagccttttaaatgcaaacaatgtgacaaatgttttagGGAAATAACAAGTTTAAAATATCATGAAAGagttcacactggagagaagccttttaaatgcaaacaatgtgagaaaGGTTTTCGCAAGGCAGGACATTTAAGAAGacacgaaagaattcacactggagaggaGCCTtataaatgcaaacaatgtgagaaattttatggcgttgccgttgccgttcccgtcgttgatgctaaaactccctattattgtTGTGGAGGATGTGTTAGCGTTtggttattttcttctttttatagGAAAAAGTTAGTTTATCTATTTTGA

Transcript

ENSKKQT00000050211

Protein

Gene family

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24399	ZINC FINGER AND BTB DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0001227	Molecular Function	DNA-binding transcription repressor activity, RNA polymerase II-specific	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala