Gene detail

Detailed information of ENSKKQP00000043365.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015757767.1, PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Acropora digitifera]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WV22	Non-structural maintenance of chromosomes element 1 homolog OS=Homo sapiens OX=9606 GN=NSMCE1 PE=1 SV=5
Q5RAZ5	Non-structural maintenance of chromosomes element 1 homolog OS=Pongo abelii OX=9601 GN=NSMCE1 PE=2 SV=1
Q3T0X7	Non-structural maintenance of chromosomes element 1 homolog OS=Bos taurus OX=9913 GN=NSMCE1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006094 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07574 all species →	SMC_Nse1	Nse1 non-SMC component of SMC5-6 complex	Family	Interproscan
PF08746 all species →	zf-RING-like	RING-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR011513 all species →	Family	Non-structural maintenance of chromosomes element 1	Interproscan
IPR014857 all species →	Domain	Non-structural maintenance of chromosomes element 1, RING C4HC3-type	Interproscan
IPR002219 all species →	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR20973 all species →	NON-SMC ELEMENT 1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0030915 all species →	Cellular Component	Smc5-Smc6 complex	Interproscan
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22817	NSMCE1, NSE1; non-structural maintenance of chromosomes element 1	EC:2.3.2.27	DNA repair and recombination proteins	ko03400	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.