Gene detail

Detailed information of ENSKKQP00000044390.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_044173785.1, LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 23-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKKQT00000051784

ATGGAAAATCATAAAGCAAAACTGTTTCAGATTTTAGAGGACGCACTGGTATGTTTAGCGATTGTCCACAATGAAAATGATGAGGATAAAGATATCAAGGAACTTTTCCAGCAATTGCTAAAACCATTTTGGGCATCTGTTCCAGTGGATATGAGAGAGCAACTTCTCCAGGAATTTGTTTTACACATTTACCATGAAAACAATCCAAGAAGGAGAGATCTGGAATTTGGTTTTCTGGGAAATTTAGTGGAAACATCACTGTTTCCTGCTAGGTTAGTGTGTGATGCTATCCTTAAGACACCTCATCTTAGCTTTCAAAAGGAAGGCATGTGGTGCAAGACATTTCAGCTACTTTTGAGGATCATCGGTGGTGTGGATTACAAgGGTTGCCGTGACATCCTTAGTTTGGTATTTCAGAGATTTCATAACATTCCAACATCCTCTGATGCCAGGTATACTGCTCGTATAGATGCCTGTGTCAAGGTTGTGCGTTATATTTTGGACAGGAATGCTTGTCTCTTGCCTGCTTACTTTGGTATAAATGAGATTTACAAAAACTTTCCAGAAGGCAAAGTAAAGCCTCATTGGtCAATTGCAAAAGTTCTGTCAGATTTCACAGAAACCTTCAGACCACTTGCCCACATGGTGTCTGTGATAGGTCGCCCATCCCTTCTTCCTGTTATTGGTCATCCTGGTTCCTCCATCAGTGTATGGAAACTTGATCCAAACACTCTTAGCTTTCCAATGTTCAAAGGCCTTCTGCCTTATGACAAGGAGCTGTTAAAGCCTCAGACAAAACTGCTTCAGCATGTCATTGCTCAGCCATATTCTCGTGATGTTATCTGTACAATGTTAGGACTCAATAAACAGCAAAAACAGCGCTGCCCAGCTCTGGAAGAACTCTTAGTAGACCTGATTGTGGTAGCAATGGAGAAATCTGAGGAGAATGACATCAGCATGACAGAAACAGGCTGTCAGCTTCTGTGGCAGCATCTTTCAAGCCATCTTATTTTCTTTGTGCttttccagtttgccagcttTCCACATATGGTCTTATCACTTTATTGCAAGTTAAATGGCAGAAATCTCAAGAAGGGCAGGGACCATCTCATGTGGGTCTTGCTACAATTCATCTCTGGAAGTATTCAGAAAAACCCGCTAAGTGATTTCAACCCTGTGATGAAACTTTTTGATTTGCTGTACCCAGAAAAGCAGcccTTGGCAGTTCCAGACATTTCTGTAGCTGATTCAGTGAACTCTTTGGCCATGGCCTGCATTTGGGTTCACTTAGCAAAAAAGgCACAATTTGAGAATGTGACTTTGAGACCAGCTGTGCCTCACATACTTAAGGATCAACTGGAATTCATACAGATGAGCTCCAGAACTGCAACCAGCTCTTTTAATATGTCAAATTTCAAAATACCACTTCTTTGCAATGCTTACAGTACAAATCCAGAACTGTTCACAGGACCCATGGCTGTGTTGGTTGAAATGTGCTATGGGAACAATAAGAACACAACTCAATTGCCTGGTCCTTCTAACACACTTGCTGCTGGTCCAACAGTCCCTTGTCCAATGAGCCTGTTGGATTCCCTAACAGTGCATGCCAAGATGAGTCTCATTCACAGCATTGTCAATCGTATCATCAAGTTAGGGAATTCACAGTCATCGTTGGCTTTGGCTCCAGCATTGGTGGAAACATACAGCCGATTGCTGGTCTACATGGAGATTGAGTCTCTCGGAATTAAAGGGTTTATTAGTTCTTTACTTCCTAATGTTTTCAAGAGTCACGCTTGGGGAATTATTCACACATTGCTGGAGATGTTTAGTTATCGCCTACATCACATACAGCCTCATTACAGAGTCACTTTGCTTTCTCATCTGCATTCACTTGCAGCTGTGCCGCACACAAACCAGAACCAACTGCATCTATGTGTTGAGAGCACAGCACTCAGACTCATTACAGGATTAGGAAGCTCTGAAGTGCAGCCACAACTGTCTCGCTTTAGCTCTGAGCCAAAACagctaTTGTCTATCGAATCTGAGGAACTGAATCGTGCTCTTGTGTTGACCATAGCACGCTCTATGCATATCACCAATGGTGAATCAAGTGGCAACTGGTGTGAAGCAACCTTGACATCTTTGATTACCAGCACTCCTCACAACTGGGCCAGTCACACTCTCGCTTGTTTCCCTGCACCACTTCGCCAATTTTATCAGCAGAATCCCTGTCCACAGGAAACAAAGCAGGACCTAAGGCAAAGAGTTGAGGATGAATACAGGCGATGGAAATCAATGACAACAGAGACTGAAACCTTGAAGCACTTTGCAGATCCTTCCTCaacaaatgttttcatttgcgctcattcggcagttaaggggttaaatgGCAAGCGTTGCTTACAATGCCTTCTCTTTGTTCGATTCAGGGTTCTGGGACAATTAGGAGCCCGTGCACTTTCTGCGCATGTGCGAGTTTTTGCTGATTATCTGGTGTACGAGCTTTCAAAATCTGTCGGTGGAAAACACGTCAACAAGTGCATCGCACACTTGAATGATCTGATCTGGAAATATAATGTTGTTACTTTGGATCGACTTGTCCTTTCCTTGGCCCTGCGCAGTCACGAAGGAAATGAAGCCCAGGTTTGCCTTTTCATCATTCAGCTGTTGCTGTTAAAACCACATGACTTCAGAACGCGTGTAAACGCTTTCATACGAGAGAATTCTCCTCAACACTGGCTCCAACATGAATGGCATCAGAAACACATGGCCTACCATACTTCCTATCCAGAGCGTTTTTACTTTGAGGGGCTGCTGGAATCGGCTGGTGCTTCGGTGCCTACTGTCCAATACCTGCCAATATACTTTGGGAATGTGTGCCTGAGGTTTCTGCCGGTTTTTGACATCGTCATTCAGCGGTTTCTGGAGCTTGCGCCGGTATATAAGTCCTTGGAGAGTCTTCTGGATCATTTGGGTTGCCTGTACAAGTTCCACGATCGTCCAATAACGTTCTTGTTCAACACGCTAAATTATTATGAACACTGTCTTCGTGACAAGCCTTCGCTCAAGAAAAAACTCGTCGGTGCGATAATCGGTGCCCAGAAGGATATTCACCCTGCTGGCTGGTGTCTCTCCAAGGGCTATATGGAGTATCTATCCAGCGCTGAAGACACGCCCTGGACTCCAGATCTGGAGTATTACTGCAATGTCATTGGTCGACTTGTAGACACCATTTCCGGTAACTCCCCTCCTCCTTTTCCCACTTGTGACTGGAGATTCAATGAGTTTGCCAACCCAGTTGCACATGCACTTCACGTGACATGGGTGGAGTTAATGGCGTTACCTGTCACGGGGCCTGAAGTTGGCGATGCAATTTTCGACGTCATACTCAAACGAAGCCACAACACTCGAGAAAATCACATCCGCGAAAATCTCATGGAGTGGATAAATGCTGTGGGCCTGGTATTTTCGTCACTTCCGGAGCCTTACTGGAGTAAAGTATACGAAAAAATTACTGAAGTCCTTGCGAGCGATCTTTCCGCGCGAGACGTTTCTTTTGAGGACTTGTCACGAGCCGCTCCATTCCCCTACTCGTTCTTGGACTTTACAACTAATGTAGCCATGCATTCAGAAACCACTGCAGACTACGTGTTGGCTGTGACGCATGCGTTCTGGCATCATGCAAGCATTGGACAGCTTAGCCAAGTTCCCCAGTTCCTCCGTGAAAGCATTTCACCGCTGATCACCAACGAGGCTCAGTTTCTGTACGTTTGTCATCTTTTGGGGCCGTTCCTTCCGAGATTCCTGGTCGAAAGAACCAGATGTCTACAAGAGATTGTCCTCGAGCTCTATCATTTACTGGAAAAAGTCAACAGGGAAGTTCAGCATTTACACTGCACTGACACAATTTGTGACTTTTTATACCACATCAAATACATGTTCATTGGCGATAGCATCAAAGATGAAATCCTGAAGATCATTCCGCAACTGCGCCAATCATTGCAGATCCGATTGCGATTTATGACACAGGGTGTGAAGCGAGAAGAAAATACTGTTTAG

Transcript

ENSKKQT00000051784

Protein

Uniprot

Uniprot term	Description
Q6P423	Mediator of RNA polymerase II transcription subunit 23 OS=Xenopus laevis OX=8355 GN=med23 PE=2 SV=1
Q5RIW8	Mediator of RNA polymerase II transcription subunit 23 OS=Danio rerio OX=7955 GN=med23 PE=2 SV=2
Q9ULK4	Mediator of RNA polymerase II transcription subunit 23 OS=Homo sapiens OX=9606 GN=MED23 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF11573	Med23	Mediator complex subunit 23	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021629	Family	Mediator complex, subunit Med23	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12691	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 23	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005667	Cellular Component	transcription regulator complex	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0010628	Biological Process	positive regulation of gene expression	Interproscan
GO:0016592	Cellular Component	mediator complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15166	MED23; mediator of RNA polymerase II transcription subunit 23	-	Transcription machinery	ko03021	deepkoala