Gene detail

Detailed information of ENSKKQP00000044707.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_044179536.1, integrin alpha-9-like isoform X2 [Acropora millepora]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

ENSKKQT00000052105

ATGCTCTTCACTTCAATAATTCAAGTTTGTTTGCTTATACAAAGTTTATCTATCCAATCTTACGGCTTCAACTTCGATTTGGAAAGTGCATTAATTCTCAGCCCTCCTCAAGGAAGTGAGAGTAAATATTTTGGATATTCAGTTGCCCTTCATTCGTTTAACGATAAATACTGgGCCATCGTTGGAGCACCATTGAGTAATGGGAGTTCTGGTGGTGAAAAATTTATCAGATATGGAGAAGTATATAGATGTGAATATACTGGTCGTGGATCACAGAGTTGCAGCTCTATTGATGTAGATAACACATCCCCAGAAATAGTGAATGGTGATTACGGGGAAGTAAAGGAAGGACAGTGGCTAGGAGCAGTAGTTTATAGCACTGGCAAAGATGGCAAAGCTATGGCCTGTGCTCCGAGATACATTAAGCTTGAACCTTATCCTCAGCTTACTTTGAGATGGTTACTAGGAAGATGTCTTCTCCTCAAAGATGACCTTTCAGGACACCTAAATAGAAAATGGATTCTTAATCCGTGTGAATATGAGCCAAAAAGTAATAGTGACTTTGGATATTGCGAAGCAGGCCTCAGTGCAGAGTACATGAAGGACCCTCCAAACAGTGTTATTTTTGGTGCAGTTGGCTCAAAGCAATGGACAGGCGCGGTGATGATGGTTGACCCAGATAATCCTTTGGGTAAACCTACAATAACAACGCAGGATCAGATTGATCGGTTTGAATATAATGcttttttgaaaataatgtgTTGCAATTTTCAGACTGGAAGCTATTTTGGGAGTGTTGTTTGTGCTGTGGACTTGGATAAAAATGGGTATGCAGATGTTCTTGTTGGCGCTCCTTACTTCACTGATGTATTGGACGAGGGACGTGTTTACATCTATCTGAATGATGGAAAGGGTATCCTCAATTTGCTGGACACTGTGCTCTCGGGAGATAAGAAATACAATGCTCACTTTGGTCAAGCTATTGCTTCTGTCGGAGACCTGAATGCTGACAAATTCAACGACGTAGCCATTGGTGCTCCTATGGAAGGCGAAGATGGAAGCGGCGCAGTCTACATTTATCATGGTAGCAGCAACGGAATTAAGCTACCTTATTCGCAGaaaattATGGGGTCGTTCATTCAGCCAGGCATTAAGATGTTTGGAATTTCCGTGGCTGGAAATCTTGACGTGGACCAAAATGGATACCCagATATTGTTGTCGGCGCTTATGCATCAGATAAAGCTGTTTTGATAAGGACAAAGAGCGTTGTTTCGGTAACAGTTGCTATGACGTTGAGCGAGCAACAGATCACAGTGGAAGGCAACGACAGTAGCTGCGACTTGGACGGAAAAAGATATAAATGGTTTGTACTTGCATatctGCACCTTACTTTCACATTTGATTTGGACAAGGACATAGACGTCCAATTGCGACGTATGTTCTTTTATGATGAAGTTACGAAGAGCCGAACCGTTTCCTTGAGGCAAAACACCACCCTTGCTGAGCCAAACACAAATTACGAAGTGTTGCGAAAAACAGCTTACATCAAGAGTAAAGATGAGCTTGGCGACCTCACCTCTCTTCTCCCTTTTGATGTAACTCTTTCACAACCTCAACCTCCTTGTGCCAACAACATGTGTCCTATTCTGAATGATCGCCTGGCAACATCCTTGCGTTTCACGATCCCCTTCGCTAAGAAATGTAGAAACCGAATTATCTTACATACTGCGAAATCTTTTGGAATCAAGTTTTCACCCGGTAGCGTGAAAGAGGACTTTGTTGTACAAGTGGAAACATCAAGGTATATGCCTAAATATCATGTGGAATATTTGACAAAAGACTTGGATTCCATTGGCCCAGAAATTGTTCAGACGCTGTCGGTGCGTAATAATGGTCCAAGTGACATAAGAAGCTCAGAGGTGGTCGTTAATTTTCCAAAAGCGTATTCGTCCTCTAAACCGGATAGCTACCTTCTCTACCTTCTACTGGTTGAGCTCTATCGTCTTCAAATTGATAAGGTTGTGGAACTTGACAGTCCAAAAGCAGTGGAGCTGGTGACGAGTGCCAGAGTGAAAGTTTCAGATGACATCACCCAATCTAATTATGAAAACGACGATGCAGAGATCAAAATAAAGGCCAGACCCGCTAGCACTGCAGCGCAGGAGAAGAAAACGCCGTGGTGGATAATCTTGTTATCTGTTCTCGGTGGGTTATTGCTTGTGGCTGCAGTCATTGTCATACTTTACAAGGTTGGCTTTTTTAAACGCAAGCAAATCAAGGATATCTCTGCTCCAGATACCACAGAAATGACAGTCCAGTAG

Transcript

ENSKKQT00000052105

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P13612	Integrin alpha-4 OS=Homo sapiens OX=9606 GN=ITGA4 PE=1 SV=3
B8JK39	Integrin alpha-9 OS=Mus musculus OX=10090 GN=Itga9 PE=1 SV=1
Q00651	Integrin alpha-4 OS=Mus musculus OX=10090 GN=Itga4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000604 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01839 all species →	FG-GAP	FG-GAP repeat	Repeat	Interproscan
PF20806 all species →	Integrin_A_Ig_3	Integrin alpha Ig-like domain 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR013519 all species →	Repeat	Integrin alpha beta-propellor	Interproscan
IPR048286 all species →	Domain	Integrin alpha, third immunoglobulin-like domain	Interproscan
IPR032695 all species →	Homologous_superfamily	Integrin domain superfamily	Interproscan
IPR018184 all species →	Conserved_site	Integrin alpha chain, C-terminal cytoplasmic region, conserved site	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR000413 all species →	Family	Integrin alpha chain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23220 all species →	INTEGRIN ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005178 all species →	Molecular Function	integrin binding	Interproscan
GO:0007160 all species →	Biological Process	cell-matrix adhesion	Interproscan
GO:0007229 all species →	Biological Process	integrin-mediated signaling pathway	Interproscan
GO:0008305 all species →	Cellular Component	integrin complex	Interproscan
GO:0009897 all species →	Cellular Component	external side of plasma membrane	Interproscan
GO:0033627 all species →	Biological Process	cell adhesion mediated by integrin	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000044707.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.