Gene detail

Detailed information of ENSKKQP00000044834.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_015772266.1, PREDICTED: zinc finger protein 2 homolog [Acropora digitifera]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000052230

CGCATACATTCACTCAGTCTTGCGTTTCTACATGCTCTGGAAAGATTGAAGTTTGGTAATGAGACGTCTCATTTAAGTGCAGTGAACGCCGATTGGAAGACTCCATCGGAGAAGCTACGATTCTGTCGCTGTACAGTGAACAAGATAGCAGTGAGAATGGGAGTCGGAACGCGTTCGTCAACTAAAAAAACCGAAGAGGAGGAGGATATAAAGGCAAAAGAAGTGGCTATTAAAGTTGACGCTGAAACTCAAACTGACCCTGAAATAACGGGAGTAGACGCGGATGATTTCGAAGAAGATGATGGCGAAGAATCTGGCTCAGATAGCagcgatgatgaagatgatgaattAGAAGCAGGGGAAGACAGACCAATTAAAAGTGTCGACAAAGGAACTTCATCCAAGCCAGTGCGCCGCAAAATTATCGAGCTTAAGTATTACTTCGGAGAAGATTTGCCCGACGCGGAGCTCAATAAACTTGCGCAAGCAGACGTTATTGTTCCTCCTGGACTAGAAGTCAAGGAATCAAGCATTCCAAAGGCTGGCAGAGGAGTTTTTGCGAAGTGTGTTATTCCAAAGCATGACTTCTTCGGACCGTTTGTGGGTAAAAAGATTCCAGCAGAAGAGGCAAAGAAGTACAAAGATTCTTTGTACATGTGGGAGGTGCGAGATGACTACGGGAAGCTGATGCATTTGATAGATGGTCGTGATGCTTTCCAGTCTAATTGGCTTCGTTATGTGAACTCTTCTAGCAGTGTGTCTGAACAAAATATTCGTGTTGTTCAGTATGATGGCAATATCTACTATATGGCAACAAAGCAGATTGAGATTGGACAGGAACTGTTAGCATTTCATGGTGAAAAATTTGCACGAATCCTTGGAATTAAGCGACCTAAGAGGAAAGCAAAAGaaATTGAACCCAATGATGATGAAAGCTTTGCTTGTAAAAACTGTGGAAAGATGTACAGTAACCCTGCATCACTGATTGGACATCTAAAGTACAAGTGTAACACAGGTCAGCAAAGAAGTATTTTTGTGCCTCAGCCTGTTGGTCCACGAGCTGCAATTCCTAAGATAAAAGTCACTGAGGAATATGCCCGCCAACAGAATGAGAAACTAAAGAAGTTCAAGTGTGATGAATGTGGCAAGGCATTCATTCGCAACTACACCTTACAATGCCACAAATTGATCCATACTGGTGTGAAAGAGCACAAGTGCACAGAGTGTGGCAAAGAGTTCACTCTCTTGAAGCATTTGCAACGACACCAGCTTGtgcacactggagagaagccttacAAGTGTCACCTTTGTGGCCGTGCCTTCTCTCAGCAAGGCAGCCTTCAAGCTCACAGCCGCACCCACACTGGAGTTAAACCATATTCCTGCAAGATATGTGGAAGGGCGTTTGCACTCCAGTCTCCTCTTCTGTCTCACATGAGGACACACAGCAAAGAGAAGACATTCAAATGTGATATCTGCGACAAGGCATTTACACACAGAAATACATTGTCCAGACATCAGCTCATTCACACTGGTGTTCGTCCATTTAAGTGTGATGTCTGTGAAAAAACATTCACACAGACCAATGATTTGAAGCGCCACAGTCGCATTCACACTGGTGTGCGTCCTTACAAGTGTCACATCTGTGGTAAAGCCTTTACAGTCGAGTTCACTTTGGTTTGCCACATCCGAACACACACAGGAGTTCGTCCTTACAAGTGTGATCATTGTGAAAAAACATTCACTCAGCCAGGTGCCCGTCTGAAACATGTGAGGAACTACCACCCTGACAAGCCACTTCCTAAAAAGgaAACATTTAAAGCCACATCTGCAGAATCTCTTGCAACTGTCAGTTCTCAAAATACAGGGATTTCTACTACAACCTGTGCAAACAACTCCCAAGCATCCAGTAGTTCTGCTAATACTGATAACACATCCACTATTGCTGATGAGATAACAGAGAATTCAACCCCTGTCACCAGTGATACTGAAATGGTTCAATTACCTGCTGACACTGTAGTGTTGTCTGTCTCCTAAATCAATGATAAAGGACTAATTTCTGCACAAGACAGCTTTGTAGAATCAAGGATGCCAACTGCACGTTTAGActagaataataattgttattgtttacCTATCTTCTCTGTGGGATAAAAGATGCTGATTTAATGATACATGTTTGATATGGTGTAAAATGGCCTTCATTCTCAAAAGGATCAGAACAAAGGGGAGGAATCAATATTTCACTTAATAGTTAGGTGGTACATTTAAGATTTCAGCACATGAAAATAACATATGTGCTAATTTAACTTGAATAACTTAATGTTTTTTGAATGTTTAACACAACAAATTATGTGAACAATGAAGGAAAAGGGAGAATTTTCAGTTTTAGTCTATTGAATTTAATGAAGACAATAATTTGCTCAAAGGTTTCATAATGATTATCATGATGATGAGAATGTCTTTGACCACATATacctataataattattaatgatgcAAGTTAATATTTGTAACAGTATTGAGTCTTTTGCTTTGGTTTAGAATGGTCAATAAGCAGTGTTTTCTGGATTTGTGTGAAAATGCCATGATGTGCTTTTTGTATGAGATTAATAAAACAGgagaatcttttctttttatccCAACTGtgtgaaaaagtgaaaaattatcTACCAGTGTTAGGACGTAATATCCGGATGCTCagtcattttttattttcataaattTTTGTCTCAACTTGACAAACTATGTACAAGCTTATTGGGATAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2A935	Histone-lysine N-methyltransferase PRDM16 OS=Mus musculus OX=10090 GN=Prdm16 PE=1 SV=1
P14404	Histone-lysine N-methyltransferase MECOM OS=Mus musculus OX=10090 GN=Mecom PE=1 SV=2
Q9HAZ2	Histone-lysine N-methyltransferase PRDM16 OS=Homo sapiens OX=9606 GN=PRDM16 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009812 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21549 all species →	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR044417 all species →	Domain	PRDM7/PRDM9, PR/SET domain	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24394 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0042054 all species →	Molecular Function	histone methyltransferase activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0000981 all species →	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000044834.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.