Gene detail

Detailed information of ENSKKQP00000045574.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029190750.2, ubiquitin-protein ligase E3B-like isoform X1 [Acropora millepora]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000052971

ATGTTTACTAACAGtgattcaaagaaaaataaggAGTTTTTTGGGAAAGTTAAAGCTGCTCGCCAGCAACGAGCGGAggagaaagaaagagagaagGCTGCGATTGTTATACAAGCGTGGGTGAGAAAGTGCCTTTGTATTTCACGACTACGATCTGAGATAAGGaaggaatttgacattttcattgAAAAGAGTGTGACAAAGAAGCCTTCAGgtacTGATGTCTTTCATCTTGCAcgaaaatttcttttcattttccataTTAAGGAGGATGAAAAGAGATTTGAATCATTCTGTAGACTTATACTCAGCAGCATGGAACCAACACAGTCTGACCTGAAGCTGTGTTACATATCTGTTGTGCTATCTCAAGATCTTGTCTTATTGTGGCTTCAACAGCTCAAGCATATTCTACTCATCTGCTGTAAATTGCTCTGTAATTTAAAGCCCAATTTGTCCATAGAAGCAAAAAAGATCAGTGTGTACCTGAATATGCTTATCATTTTTACTGACTGTTCAAACTGGAAAGTTTTCAGCATCAAAGGAGGTGAAGCTCTTCGACCAAGTCTACAGCAACTCTGTGCCAATGTTCTGGGTTATTTGAATACAAAGGGACTCTATCCATCGTTAAAGGCTTTATTGATGTCTGGTCTGGCTTGCAGTGAACCCTCCCTGAAGTCTGCTTCCTTCATGGCAATAATCACACTTTCTCTCAGGCCATTGATTCTCAGCAAGTTTTCTGACAATCTCTGCAGTTTGTTTGTATTGAATATTCTTTCAGTCCCTGGGCTCATGTTGCATCTTTCAGTGATAGCACTAGATgGGTTGAAACCACTGAAAGCTCATTGCATCTATCAGAAGGTTTTGTCATTTCTAAAGAAGGAACAATGTAGCAGGATTGTTCTAAATTCACTAGAATGTAGCTATTCTCTCTGTCTGTTAGGTAATGTGTTGGAACTTTCTCAGCTTGAACAAGAGGTTTTTAAGCAGACAGTTCCAGATTTTATTGAAATTGTGACAAAGCTACTTCATTATTGTCATTCGTATGTTGCAAAGAAGCAATCCAATCTAACAAACTGGCATCCCGTGCTAGGCTGGTTTAAACAACCATCAGATGAAAGacTGAGCAGTTCCATATCACATGTGAGAAAGCAGCTTCAGTCTCTTTGGAGAAGGAAAGTTGTGAATCTTCTCTTTGAGGATTTGTTACTTCTCAGTCAGCAAGAGGATGAAGATCCCAGAGGCAAAGAAGACAAAGGTACCAAAAAACCATGGTCTCGTTTAGCCAGGACTCGCTTCCGGTCAGCTGTATCAACTTTGTCCAGTTCTCAATCGCAGCTTATCTTGAAGGCTTGTGTCATGTATCAGAGCGTGTTGTCTACATTTTCTCAGATCAAGCTTGATATCCTAACAGGTCTGAGCTACCATGAGGGATTCGTTGTGCACCTCTGGAAGTTTTTTGATTCGTGTACTCCAGATGACAGCGCGGAAGCTCGCGTATCAAGCCTCGAAAAAACAGGCCTCTTTAACAATTATGAGCTCCAGGCAGCCCTTATTCTGTTCTGTGACTGCTGCAGTCACCTGATACCAATTGTTGACGACAATGAAATGTACGATCAACAAAAGCCATTTCACTTGGACGAGCTGGTCAAAATATCTGCTTTCCTTAACAACCTGGTCTTTAAAATGCTGTGGAATGAAATGGAAAACGAAGCTACCGAACAGTTGTTAAACTCATCGCATACACTTTTGATGATACTTTATGACAGAGACTGCAGACGATCATTTAGCTCACCACAACACTGGCTTGTAAGAAGTGTCAAAACAGCTTCGTTTATATCCGAACTTGAAAAGCGAAAGAAAGGTGCGCTGCTGGTGATTGAGAAAATTCCTCATGCTTTGCCACACAGAGAGAGAGTTCAGCTTTTTAGAAAGTTAGTGGCAAGAGACAAGGAGGACCTTGGAATCACTCGCCCCACAGATGAATTCGTTCCTCACGGCACGCTTATCACAGTTCAGCGCTCGAGATTGTTGGAGGATGGCTATGAACAGTTATCTTTGCTTCCAGTTCACACATTTAAAGGACTGATTCGCGTCAGGTTCATTAACGAACAGGGTTTATCTGAAGCAGGCATTGACCAGGATGGTGTGTTCAAAGAGTTTTTGGAAGAGGTGGTAAAGAAAGGATTCGATCCCTCGCTCGGTTTGTTCAAAATGACAAGCGGCGATGAAGAGCGACTCTATCCTTCCTCAACATCATTCATTCACAGCAACCACTTAAAATTATTCGAGTTCCTGGGTAAAATGCTTGGTAAATCACTTTATGAGgGTCTGGTAATGGAAGTACCCTTCGCCCCGTTTTTCCTTAATCACGTTCTTCGTCATCAGCATAGCAGCCTTTACAGTTCAATTGATGAATTGCCTTCATTAGATCACTCACTTTACAAAAGTCTGTCCTTCATAAAGCATTACGACGGTGATGTTCGAGATCTGGAACTAACTTTTTCCTTCGACGAGGACGTCCTCGGCAAGgTTGTTACTCATCCGCTCATGCCTGGAGGAAACGCCATTCAGGTCACCAATGATAACAAAATCAGCTACGTTCATTTAATGGCGCATTATCGTATGTGTGTTCAAACCCGCGAACAGACGGCAGCCTTCATACGGGGCTTTAACTCCATTGTGCGTAATGATTGGCTCCACCTGTTTTCCGGTCCAGAGCTTCAGAGGCTCATTTCCGGTGACAGCGCTGCTTTGGACCTCAGCGATCTGAGGCGTCACACTCGTTATTACGGAGGTTACCATAGCAGCCATAGGGTGGTCAACTGGTTGTGGGATGTTCTGGAGAAAGAGTTCACGGACGACGAGAAATCCAGGTTTTTAAAGTTTGTCACAAGTTGCTCCAAGCCCCCGCTGTTGGGATTCGCGCATCTTGAACCGCCATTCTCTGTTCGCTGTGTTGAATGCACTGATGATGAGGATGAGGGTGACTCTGTTGGCAGTGTTTTTCGCGGATTTTTCAGCATCGGTAGAAGGCGTGACCCCGTTAGCAGACTTCCCACTTCATCGACTTGCTTTAATTTGCTTAAACTTCCAAACTACAGAAGGAAAAGCACTTTGAAGGAGAAACTGCGCTATGCAATCAACGCGAACGCAGGGTTCGAACTTTCCTGA

Transcript

ENSKKQT00000052971

CGAAAGAAAGCTACGTTTACCCATTTTTGctctttgaaataaatttgaagGTTCGAACAAACACATATTTTTCTATTCTTCTTCATGAGCACTGGTTACGTGTTTGTCAAGTGTAAATGTGGTAATCACCATACATGACGTATCAATACCAATGATCTCGCGGGCACTAAGgagtgcaaaataaaaacactcGAATTGTCACCTTAAGGTTGTCTTTTCGCTGGTAACTCGATTAAATTCATAATGTTTACTAACAGtgattcaaagaaaaataaggAGTTTTTTGGGAAAGTTAAAGCTGCTCGCCAGCAACGAGCGGAggagaaagaaagagagaagGCTGCGATTGTTATACAAGCGTGGGTGAGAAAGTGCCTTTGTATTTCACGACTACGATCTGAGATAAGGaaggaatttgacattttcattgAAAAGAGTGTGACAAAGAAGCCTTCAGgtacTGATGTCTTTCATCTTGCAcgaaaatttcttttcattttccataTTAAGGAGGATGAAAAGAGATTTGAATCATTCTGTAGACTTATACTCAGCAGCATGGAACCAACACAGTCTGACCTGAAGCTGTGTTACATATCTGTTGTGCTATCTCAAGATCTTGTCTTATTGTGGCTTCAACAGCTCAAGCATATTCTACTCATCTGCTGTAAATTGCTCTGTAATTTAAAGCCCAATTTGTCCATAGAAGCAAAAAAGATCAGTGTGTACCTGAATATGCTTATCATTTTTACTGACTGTTCAAACTGGAAAGTTTTCAGCATCAAAGGAGGTGAAGCTCTTCGACCAAGTCTACAGCAACTCTGTGCCAATGTTCTGGGTTATTTGAATACAAAGGGACTCTATCCATCGTTAAAGGCTTTATTGATGTCTGGTCTGGCTTGCAGTGAACCCTCCCTGAAGTCTGCTTCCTTCATGGCAATAATCACACTTTCTCTCAGGCCATTGATTCTCAGCAAGTTTTCTGACAATCTCTGCAGTTTGTTTGTATTGAATATTCTTTCAGTCCCTGGGCTCATGTTGCATCTTTCAGTGATAGCACTAGATgGGTTGAAACCACTGAAAGCTCATTGCATCTATCAGAAGGTTTTGTCATTTCTAAAGAAGGAACAATGTAGCAGGATTGTTCTAAATTCACTAGAATGTAGCTATTCTCTCTGTCTGTTAGGTAATGTGTTGGAACTTTCTCAGCTTGAACAAGAGGTTTTTAAGCAGACAGTTCCAGATTTTATTGAAATTGTGACAAAGCTACTTCATTATTGTCATTCGTATGTTGCAAAGAAGCAATCCAATCTAACAAACTGGCATCCCGTGCTAGGCTGGTTTAAACAACCATCAGATGAAAGacTGAGCAGTTCCATATCACATGTGAGAAAGCAGCTTCAGTCTCTTTGGAGAAGGAAAGTTGTGAATCTTCTCTTTGAGGATTTGTTACTTCTCAGTCAGCAAGAGGATGAAGATCCCAGAGGCAAAGAAGACAAAGGTACCAAAAAACCATGGTCTCGTTTAGCCAGGACTCGCTTCCGGTCAGCTGTATCAACTTTGTCCAGTTCTCAATCGCAGCTTATCTTGAAGGCTTGTGTCATGTATCAGAGCGTGTTGTCTACATTTTCTCAGATCAAGCTTGATATCCTAACAGGTCTGAGCTACCATGAGGGATTCGTTGTGCACCTCTGGAAGTTTTTTGATTCGTGTACTCCAGATGACAGCGCGGAAGCTCGCGTATCAAGCCTCGAAAAAACAGGCCTCTTTAACAATTATGAGCTCCAGGCAGCCCTTATTCTGTTCTGTGACTGCTGCAGTCACCTGATACCAATTGTTGACGACAATGAAATGTACGATCAACAAAAGCCATTTCACTTGGACGAGCTGGTCAAAATATCTGCTTTCCTTAACAACCTGGTCTTTAAAATGCTGTGGAATGAAATGGAAAACGAAGCTACCGAACAGTTGTTAAACTCATCGCATACACTTTTGATGATACTTTATGACAGAGACTGCAGACGATCATTTAGCTCACCACAACACTGGCTTGTAAGAAGTGTCAAAACAGCTTCGTTTATATCCGAACTTGAAAAGCGAAAGAAAGGTGCGCTGCTGGTGATTGAGAAAATTCCTCATGCTTTGCCACACAGAGAGAGAGTTCAGCTTTTTAGAAAGTTAGTGGCAAGAGACAAGGAGGACCTTGGAATCACTCGCCCCACAGATGAATTCGTTCCTCACGGCACGCTTATCACAGTTCAGCGCTCGAGATTGTTGGAGGATGGCTATGAACAGTTATCTTTGCTTCCAGTTCACACATTTAAAGGACTGATTCGCGTCAGGTTCATTAACGAACAGGGTTTATCTGAAGCAGGCATTGACCAGGATGGTGTGTTCAAAGAGTTTTTGGAAGAGGTGGTAAAGAAAGGATTCGATCCCTCGCTCGGTTTGTTCAAAATGACAAGCGGCGATGAAGAGCGACTCTATCCTTCCTCAACATCATTCATTCACAGCAACCACTTAAAATTATTCGAGTTCCTGGGTAAAATGCTTGGTAAATCACTTTATGAGgGTCTGGTAATGGAAGTACCCTTCGCCCCGTTTTTCCTTAATCACGTTCTTCGTCATCAGCATAGCAGCCTTTACAGTTCAATTGATGAATTGCCTTCATTAGATCACTCACTTTACAAAAGTCTGTCCTTCATAAAGCATTACGACGGTGATGTTCGAGATCTGGAACTAACTTTTTCCTTCGACGAGGACGTCCTCGGCAAGgTTGTTACTCATCCGCTCATGCCTGGAGGAAACGCCATTCAGGTCACCAATGATAACAAAATCAGCTACGTTCATTTAATGGCGCATTATCGTATGTGTGTTCAAACCCGCGAACAGACGGCAGCCTTCATACGGGGCTTTAACTCCATTGTGCGTAATGATTGGCTCCACCTGTTTTCCGGTCCAGAGCTTCAGAGGCTCATTTCCGGTGACAGCGCTGCTTTGGACCTCAGCGATCTGAGGCGTCACACTCGTTATTACGGAGGTTACCATAGCAGCCATAGGGTGGTCAACTGGTTGTGGGATGTTCTGGAGAAAGAGTTCACGGACGACGAGAAATCCAGGTTTTTAAAGTTTGTCACAAGTTGCTCCAAGCCCCCGCTGTTGGGATTCGCGCATCTTGAACCGCCATTCTCTGTTCGCTGTGTTGAATGCACTGATGATGAGGATGAGGGTGACTCTGTTGGCAGTGTTTTTCGCGGATTTTTCAGCATCGGTAGAAGGCGTGACCCCGTTAGCAGACTTCCCACTTCATCGACTTGCTTTAATTTGCTTAAACTTCCAAACTACAGAAGGAAAAGCACTTTGAAGGAGAAACTGCGCTATGCAATCAACGCGAACGCAGGGTTCGAACTTTCCTGAGGCGTACACGAAAAATTGATTGGATGAGAACGACCACAGCAGCTAGATGAGGCGCTGTCAGGAAGAAACTGGCACAGGAATAACACAGAGTCAGTCGGATGCGCGCAAATTTTGGAGAAGTGACAATTTCTCTGCCGATTGAAAGGCTAAGAGACAGGGATCTAATTCTCCCCGATTTCAAACAAAATGCAGATTTCAAATTCTGTCTACACGACATGGAAATTCATATTTTGCTTGCCGCTGGCCTGGGATGTGTAGTAAACGGATTGATAGCAGAAAAATtacatataaaataaaaactttcaGGTCTTTTCACtcgctcaaaacatgccaatttcagctttaaatgtttttttttggtgcaTTCTTTAgttctcaaactgtttattacacacGTAACGAAGAAAAAGcgaaacgaaataaaaattttgatgtCATATTCATTTTATGTCTGACCGTGTCGAGAGGAACATCTGTTACATCTACTATCAATATAGGATGAAAAGTTTAGCTAGGTGAACTTTTTGGCATCCACAACAGATACTCTCTTGTAGCCAAGAGTTTAATATAAAAATCTTGAAGTCTTGAAACACATCTGTTTTAATGACGTTTTACGAAATGAAGAGTCGCAATTTCCTTTTCACTTTTCTTGAAATTTaattgtataaaaatatatGTACAAACTATTGCAAATATTACATCAATTACATAATTATAGAAATTATTCTAACTACTAATACATTCAGGGCACAATAACGCAAtcctaaataaataaaactgtctacagtgacattttttttaaaaagaggACCTATCACTTTTTTCTTAATGTATTATTGACTGTCACAACTTATTTGTACGAGCTTCACTcctttttgcttttcatttatCGATtgagttattttttcatttccgCGCTCAGGTCAAGAAGATGTAATCTTAAAATGTTTAATAAAAGTATTGGTTATCATTTCTATTCATAGTCAAACTGAGAGACAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q7Z3V4	Ubiquitin-protein ligase E3B OS=Homo sapiens OX=9606 GN=UBE3B PE=1 SV=3
Q9ES34	Ubiquitin-protein ligase E3B OS=Mus musculus OX=10090 GN=Ube3b PE=1 SV=3
Q08CZ0	Ubiquitin-protein ligase E3B OS=Xenopus tropicalis OX=8364 GN=ube3b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003625 (this species only)
Ubiquitin family	E3\|E3 activity\|HECT · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00632 all species →	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044611 all species →	Family	Ubiquitin-protein ligase E3A/B/C-like	Interproscan
IPR000569 all species →	Domain	HECT domain	Interproscan
IPR035983 all species →	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45700 all species →	UBIQUITIN-PROTEIN LIGASE E3C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000209 all species →	Biological Process	protein polyubiquitination	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0004842 all species →	Molecular Function	ubiquitin-protein transferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10588	UBE3B; ubiquitin-protein ligase E3 B	EC:2.3.2.26	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.