Gene detail

Detailed information of ENSKKQP00000046567.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_029207241.2, cullin-2-like [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKKQT00000054028

ATGTCACTGAGACCTCGTCTTGTGAATTTTGACGTAACATGGGCTAAGATCCTGGAAACATTGCAGTCAGTTGTCACATTGAAGAAGATTGCCCGAGCGGTGTGGAATGACCTGAGCAGTGATGTTTATGCCCTTTGTGTAGCTTCCCCTGAGCCTTTGGGAGAAAAACTCTATGCTGAAGTCAAGAATTTCTTGGAGAGTCACATACAAAGCTTATACGAGGCAGTCAGTGGGCCTGATGTTGAGATCCTTCGACTTTACCACAATCACTGGTTACAATTCAGCAAAGGTTCTAGTTATATGAACCAGTTATTTGGCTATCTCAATACCCATCTAAAGAAACATAAACAAGACTATGGAGAAATTTCACCTTACAGCACCTCATTTTGTCCTGATTCAGGGGAAGAGGTCATGGATGTTGGGGCTCTTGCTCTGGACATCTGGAAACGGAAGATGATTGAACCGTTGAAAGAGACACTAGTAGAACATGTGCTGATGGAAGTGAAaaaAGACCGCAATGGAGAGGACACACATCAGAATGTTATCCATGATACAGTGCTATCTTTTGTTGAGGTGCAACAGTTCCAGTCTAAAGGACTTCTACATCTCTACGAGGAGGTGCTTGAGAAGCCTTTATTGAAAGAGACCAAGTCTTACTACCGAAGGGAGGCAGCAGAACTCCATGCAGACAATACATCCCATGCTTTTATAGCAAAGATTGATGTCCGTATCCAAGATGAAGACTTGAGGACAAGAAAATTTTTTCATCCTGTGTCATTTAGCCGAGTCATCAGAGAGTGTGAAGCTCGGCTGGTCGAAGACTACATTCCTTACTTGCAAGGAGAATGTCGGCAAATGATCAAAGATGAGAATAGAACAGGTAATCTTGCTCGGTTATACAAACTGCTCAAGAATATTCCCAAGGGGCTTCAAGCTATGGTTTCAGAACTAGAGGACCACATCACCAAAACTGGCCTTCAATCAATTAAAGCTGTTAAAGTCGAAAATgGCCCACAGCAATATGTAGATGAATTGCTCAATATCCACAGGAAATTCTCAGGCCTTATTAGAGAGACATTCAGAGATGATCCAGCATTTATATCCGCATTAGACAAGGCTTGTGCTACAATAGTAAACTACAGACATGATCCCAGGCGCTCGTCCAAATCTCCAGAATTGCTGGCTAAATACTGTGACTCCGTATTGAAGAAAAGCACAAAGAATCTTAGTGACACAGAATTAGATGAAAGACTTGGTGATATGGTAAGTGATGACGGTTTGTGTAGTTGTTTCTATTCCAAGATGCTTGCCAAGCGACTTATTCACACGCTATCAGTGTCAATGGATGCTGAAGAGGGAATGATTGCTCGCTTAAAACATGCCTGTGGCTACGAATACACAAACAAGCTCCATCGCATGTTTACAGACATAAGCATCAGCTCAGACCTGAACTCCAGTTTCAGCGACTTTCTCTCGCAAGCAAATTCTTCTCTTGGTGTTGgattttctctttttgtccTTCAGTCCGGTGCTTGGCCCCTCGGCCAGACGTCAATTTCTCCATTATCAATACCACAGGAACTTGTCAAGTCCGTTCAAATGTTTGAAAAATTCTATAATGGAAGGTTTAATGGCCGAAAGCTGACGTGGCTTCAGCACTTATCAACAGGTGAAGTCAAAGTCAACTTTCTAAAACGCCCTTATATAATCACCGTGACGACGTTTCAAATGGCTGTCATGTTGTTGTTTAACGACAAAACAAGCTTAAATTTTAGTGACATTCGTGATCAGACTCAGCTGGTAGACAAAGAATTAATTCGCACTTTGCAATCCCTGGTGGATGTGCGACTTATTACAATGCCAGAGaACTCTGACCCTATGAAGTGTGCATATTCACTAAACCAGGATTTTTCCAGCAAACGCACGAAGCTTAAAATAACCACAGCTGTGCAAAGGGAAAGTCAACAGGACACCGAGCAAACGCTTTCTTCCGTTGATGAGGACAGGAAAATGTATCTTCAGGCTGCTATTGTGCGAATAATGAAATCAAGGAAAGCTCTAAAGCACAATTCTTTGATGCAAGAGGTAAGTGTGGAGATTTATTGGATGAAATGTATTGAATCCCTCATTGACAAACAGTACTTGGAACGGCGCGAGGGGACTAAGGACGAATACACTTACACAGCTTGA

Transcript

ENSKKQT00000054028

Protein

Uniprot

Gene family

Uniprot term	Description
Q13617	Cullin-2 OS=Homo sapiens OX=9606 GN=CUL2 PE=1 SV=2
Q5RCF3	Cullin-2 OS=Pongo abelii OX=9601 GN=CUL2 PE=2 SV=1
Q9D4H8	Cullin-2 OS=Mus musculus OX=10090 GN=Cul2 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|Cullin

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10557	Cullin_Nedd8	Cullin protein neddylation domain	Domain	Interproscan
PF00888	Cullin	Cullin family	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019559	Domain	Cullin protein, neddylation domain	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR036317	Homologous_superfamily	Cullin homology domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR016158	Domain	Cullin homology domain	Interproscan
IPR001373	Domain	Cullin, N-terminal	Interproscan
IPR016159	Homologous_superfamily	Cullin repeat-like-containing domain superfamily	Interproscan
IPR045093	Family	Cullin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11932	CULLIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0031625	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0016567	Biological Process	protein ubiquitination	Interproscan
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0030674	Molecular Function	protein-macromolecule adaptor activity	Interproscan
GO:0031146	Biological Process	SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Interproscan
GO:0031461	Cellular Component	cullin-RING ubiquitin ligase complex	Interproscan
GO:0031462	Cellular Component	Cul2-RING ubiquitin ligase complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03870	CUL2; cullin 2	-	Ubiquitin system	ko04121	deepkoala