Gene detail

Detailed information of ENSKKQP00000047933.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: XP_029204559.2, tubulin-specific chaperone E-like isoform X1 [Acropora millepora]
Species abbreviation AAUST · all data for this species · gene families

Sequence

CDS

Transcript

ENSKKQT00000055841

AACACCAAATTGGCGCCAAAAAGGTCCCGACAAGATAACTAtaaagcattgtgattggttactTTTCCTTCAGAGAGACAATGAAAACGCGCGTTGTATTTAGGCCAGCTGGTACCGCTGTACACAATAAGCAATGATTTTAAAATGGCGGACGAGATCGTTGGGAAAAGGGTACTTTGCGAAGGTTTTAGAGGGGAAATAAAATTTGTGGGGCTTGTTCCACCCACGCAAGgtgaaTGGTATGGAATTGAATGGGATGACCACACTAGAGGTAAACATGACGGAACGAACGAAGGAGTCAGCTACTTTGAGTGCAAGCATCCAAAAGGTGGTTCATTTGTCAGGCCCAAGAAAGTTGACTTTGGAATTGGTATAATTGAAGCTCTTAAGCAGCGTTATGGTCAAGGTAGTGATAGTATAAATCAAGAGGACATGTATGTTATGAGTgggaaaaacaagaagaaggCCATAGAAATGGTTGGAGCAGATTCTATTCAAGAAAAGCAGAGTAACTACCAAAAATTGAAAGAGGTTAGTTTGAGAGATCTGCCAGTAAATGGGCCTGATAGAGATCATAAATTTGGCTTGTTTGCTCCATACATCTCAGAGCTTGATCTTTCCAAAACTCTTCTTTCTTCATGGGAAGATGTAGCTTCAATCACAAAAGATCTGCAACACCTATGTACACTGAATTTATCGGAGAATAAACTTAAATTGCCAAGTGCTCCAGAGACTCTTCTGCCTTCCTTTTCTACAGTGATAGTCATATTTCTGAATAGAATGCAACTCCAGTGGTATGAGGTGGAGGTTATCGTAAGCATGATGCCATCCCTCAAGGAGCTTCATATCTGTCACAACTGTCTAAGAAATCTAAgCAAAAAAGATGAACAAGTTTCTGGTCTGCAAAGACTCCAAAATATATCTCTTCTCAACCTCCAAGGAAACCAATTTTCTGATTGGGGAGTTATTTTGAAACTTGGACATTTACCAAGACTCAACCAGCTCATCTTGAATGACAATGGTATAACAAAAGTTGAACTTGGAAACAAGGTCACAGaagaatGTGGCAGTCAGTGTCTCTTTCCAGCTTTGCAGTCTCTCTACCtcagtaaaaataaaataagtgaGATTCAAAGTGTGAATGAGTTGAACCATTTCCCTTCACTGATGGAACTTAAGTTTAAAGGGAATCCTGTTTTCCAAGAGGAAACTACATTTGCAAGTCGCCAGGAACTCTTGGCACGTCTCCCTTCGTTAACTTCACTCAATGGAAGCCCGGTAAATTCCAAAGAAAGGGAGACAGCAGAAAGAGCTTACTTAAAGAAATATGCACAGGCCTGGCTCGATGCAGGTGGAAAAGTTACGGAAGAACAAGCCAGTGTATTGAAGCCTATGTTTGTGGAACTACATCCTAGATATGCAGAACTAGTAAAAGttCATGGGGTTCCTCCTGAGGCGGAACGCACTCAGAAAGCGTCCAAAACATTAAAGGATTCGTTGATTTCTGTGACTATCACTTGTCCAGACGTTCCAGACAAGAAATCAGTGCTGAGAAAACTTCCAGGAACTATGACAATTGGCAAACTGAAAGGGTTGCTTTACCGACTCTTTAAAGTTGATATCACGGACCAACAGTTATACTGCGTGGACAGCAAGCTTGGTCGTGAAGTTGAGTTGGACGATGACTTACGACAACTTACATTTTATTCTGTTCGCAATGGTGACACCATATATCTCCGATGGTGACTCGTATTTCTAATATGCAGTCTTGGCTTTCAATTAGCCAATTTCCAATCATTCGCAACAGCCACCCGCCACTACCGAATATTTTGGTAAACCTGTTTATTGCGATGAGAAAACCGAACAGTTATTTTTCTGCTCAATAACCGAGCAATGAAATGAGATTCGTTACCGCGTCTTTGTTTCGGATAGGCCACTTcgaaaaataccataatactctttgtttgtccccccaaattttgcataagcattgtttccagtttccaGTGATcctaagagaaaacaaaaacaatgcttatgcaaaattggTGAGGACGAACAAAGcaaattatggtattttccgaagtggcctattgaaACAGTCAAAACCATCGAGGTAGAGGAGATACCTAACTGTGCGCGTGTGTACGCTGTTGGAAACTTGGAACCCAAAGCACAATTGCATCGCATTCTGTTGTCGCAAAACCAAACGGCTTAAGGGGCCTGTCATCTGATTGAGATGTTGAATCCAAATGGAAAGAGTCTTTAAGGGTTCGTTTCAAAGCGAATCTAGATCTTGATAAGCAGTTGTCACTGGTGCTGTCTAACTATCCTGCAGTGCAGGTGTTTTTCAGCGAATGGATTTTCAGTACTCTATGTCTgccatgttttcatttttccccCTCCCCCTCATTAATTTCGCCTGATGAAAGCAATGATCAGTGATGAACTGGTTTAAAGTATAATAGCTTCTTCATTCAAGaaactttttttcagtttccaaGAAATGTACATCATCAGTGTTATTTTATTGTGCCTTGCGAAGGTAATATCTGTTTTCATTCATCTATATTTGCGCAACTAAAATAACACGGTTGTTgatgaatttaaagaaaaagtttttATATCCTTGCTACAAGTCTTGTTTCTTTGGGTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5U508	Tubulin-specific chaperone E OS=Xenopus laevis OX=8355 GN=tbce PE=2 SV=1
Q5U378	Tubulin-specific chaperone E OS=Danio rerio OX=7955 GN=tbce PE=2 SV=2
Q15813	Tubulin-specific chaperone E OS=Homo sapiens OX=9606 GN=TBCE PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006104 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14560 all species →	Ubiquitin_2	Ubiquitin-like domain	Domain	Interproscan
PF01302 all species →	CAP_GLY	CAP-Gly domain	Domain	Interproscan
PF14580 all species →	LRR_9	Leucine-rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000938 all species →	Domain	CAP Gly-rich domain	Interproscan
IPR036859 all species →	Homologous_superfamily	CAP Gly-rich domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR044079 all species →	Domain	TBCE, ubiquitin-like (Ubl) domain	Interproscan
IPR000626 all species →	Domain	Ubiquitin-like domain	Interproscan
IPR050576 all species →	Family	Ciliary and flagellar integrity-associated protein	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45973 all species →	PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K21768	TBCE; tubulin-specific chaperone E	-	Cytoskeleton proteins	ko04812	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.