Gene detail

Detailed information of ENSKKQP00000049030.1 in Acropora austera

Genomic Location: :...
NR annotation: XP_029207477.2, HBS1-like protein isoform X2 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSKKQT00000057129

ATGGCGAGACACAGAAACTACAGAAATTATGCTTACGAAGATGACCTGTCCGATGATGTTTATGGTCATTCAGTTGAAGATTATGACATCTCTGTGTCGCCAGGAACAGCGGAGCAGTTCATGTTCCGACGCAGTAATAGCCGGGACCCAAACCTTTCAGCATACATGGTGGATAGGTGTGGCCGAGtagaggaggaggaggaggaagatGAAGATACTGATGAAGATGACCCTCTTACAAGTTTGCAGGACTATCGCAGACCGCAGTTAGATCCAATTAGTGAAGCTAAGCTTTCATCTTGTATGGATCAGCTTCAGTCCATTCTGGGGGAAAATCTGCATGAACCCACTGCTGTTGCTGCAATTGTTCAGTGTAATTATGATGTAGACAGAGCTTTGGACCACATTTTTAGCCAAGGTACAGGTATCATTCTATTTGAGCAACTGAAAGAACTCAATACTTTATCATTATCACAGCTGCCAAACCAACCAGTGTCAAATCTTGCTTTGACCTCTCATGTCACGTCAGAAATGCCAGCATCATCCAGCAGTCTTGGGTCCTCAAGCTCTAACTGTTTGTCTGCTGCAAGCAAATTATCTGAATTTTCCTCTCCAGCCTCTTTGTGTAGATCTCATAAAAATAACCCATTTGCAAAACTGAACGACACTTTGTTACAGCGGGAACCTATTCTGCCCAATTCTTCAGAGACtgaatatatgaaatgttcagCTGAAGAACTGGAAAATGTTCTTATGTTGCCTATATTTTCAGGTCATGTTGATGCAGGCAAGAGCACACTGATGGGCCATCTTCTTTATAATCTTGGGGATGTCTCCAAAAAGTCAATGCATAAATATCCTTTAAGAAGAAAGGCTGGTAAGGCATCTTTTGCTTATGCTTGGGTGCTTGATGAAACAggtgaagaaagagaaagGGGTGTAACCATGGATGTTGGGTTAACAAGGTTTGAGACAGATACCAAGCTAGTCACACTTATGGATGCCCCCGGACACAAAGATTTTATCCCCAACATGATTACTGGAGCAGCTCAGGCTGATGTTGCTATCTTGGTTGTTGGTTCAAGTACTGGTGAATTTGAATCTGGTTTTGAAGCTGGTGGTCAGACCAGGGAACACGCCCTGCTTGTCAGGTCGCTGGGTGTAACACAGTTGATTGTAGCTGTCAACAAATTGGATAATgTTGGCTGGTCGGAAGATAGATACAATCATATTGTTGGAAAGCTCAAACATTTTCTTAAACAAGCAGGATTTAAAgACTGTGATGTTGCTTACGTGCCATGCAGTGGACTCACTGGCGAAAACCTTGTTGAGCCTAGCACTGAGCCCCCTCTTAAACAGTGGTATAACGGGCCAACCTTGCTAAACACAATAGaCAATTTTAAACCTCCAAAGCGTGAACTTGAGAAGCCGTTTCGATTCTGTGTTTCTGATGTTTACAAAGGGATGGGCACAGGAATCAATGCAAGTGGAAAATTAGAGGCCGGTAAACTTCACAGCGGTGACAAGATTGCGGTGATGCCGTCAGGGGGACAAGGCTTGGTGAAGGCCTTTACTATTCACGATGAACCCGTCCAGTTGGCTTGCGCAGGCGATCACGTGACGCTTACGCTGTCCGGTCTAGACACCATGCATGTTGGagTTGGCAGTGTTATATGCCCTCCAAGTTCTCCAATTAAATGCACAACGAAACTGAAAGCGCGAATTTTAGTGTTTAACATCCGTATTCCCATCACAAAAGGATTTACGGTATTGTACCACTATAAAACATTAAATGAACCCGCTGTAATCAAGAGATTATGCAGCGTTTTACACAAGAGTACGGGGGAAGTTCTTCAAAAGAAGCCCAGATGTCTGACAAAGAATTCCAATGCTGAGGTGATAATCCATACCTACAGACCAGTTTGTGTTGAATTGTACAAAGATTACAAAGATCTTGGAAGATTTATGCTCCGTTATAGTGGAGAGACTATTGCCGCTGGAGTTGTTACAGAAGTAAGTAAAACGGTCAATGACGCTTGTCAGATGATATAA

Transcript

ENSKKQT00000057129

Protein

Uniprot

Uniprot term	Description
Q2KHZ2	HBS1-like protein OS=Bos taurus OX=9913 GN=HBS1L PE=2 SV=1
Q5R6Y0	HBS1-like protein OS=Pongo abelii OX=9601 GN=HBS1L PE=2 SV=1
Q9Y450	HBS1-like protein OS=Homo sapiens OX=9606 GN=HBS1L PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08938	HBS1_N	HBS1 N-terminus	Domain	Interproscan
PF03143	GTP_EFTU_D3	Elongation factor Tu C-terminal domain	Domain	Interproscan
PF00009	GTP_EFTU	Elongation factor Tu GTP binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000795	Domain	Translational (tr)-type GTP-binding domain	Interproscan
IPR009001	Homologous_superfamily	Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal	Interproscan
IPR015033	Domain	HBS1-like protein, N-terminal	Interproscan
IPR050100	Family	Translation factor GTPase superfamily members	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004160	Domain	Translation elongation factor EFTu/EF1A, C-terminal	Interproscan
IPR037189	Homologous_superfamily	HBS1-like protein, N-terminal domain superfamily	Interproscan
IPR009000	Homologous_superfamily	Translation protein, beta-barrel domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23115	TRANSLATION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003924	Molecular Function	GTPase activity	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0006412	Biological Process	translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14416	HBS1; elongation factor 1 alpha-like protein	-	Messenger RNA biogenesis	ko03019	deepkoala