Gene detail

Detailed information of ENSKKQP00000050870.1 in Acropora austera

Genomic Location: not available for this species
NR annotation: PFX16501.1, Transposon TX1 uncharacterized 149 kDa protein [Stylophora pistillata]
Species Acropora austera · all data for this species · gene families

Sequence

CDS

ENSKKQT00000059392

ATGGTTCTTGCTAATTTTCGGAAGACTATTGCAATCGACTTGTCTGCTTTGTCCTCTGACCTTAGTCGTCAAGACATTGTGAATATTTTGCTTGATTTTTTCTCAAATGTTATTGTTAAATCTATTCAGTTTGTACCAGTTAAACTGGCTCATGTTACCTTTGAAGACAGTGCCACTAGAGATCATTATATTCATTTTGATGAACTTGAACTTAATGGTGTTAAGTGCCGTGTTTTGGGAGCCGGGTTACAAGCCCAGCAAGTTTTGGTTTATCATTATCCCTACGAGGAGGATGATGAAAGTCTGAAATCTGTTCTTGCAAACTTTGGTAAAGTGTTAGGCGTTCGCCATCAACACTATGTTGGCCACAATGCCGTTTCCACAGGAACAAGGATTGTTCAGATGATCCGAGATCGGCCAATTCGGCGGAATCTTACCGTGGATGGCTATCGTGTCAAAGTCTGGTATGTAGGGCAACCAGTGGAATGTGATATTTGTTCCAGGGGTCATATCTCTAAAGATTGCCCCGTGCGTGGGAAGTGTAGGCGCTGCGGCGAGGCAGGCCATTTGGCTCGTGAATGTAACAACCCGCCAAAGGCGTGGGACGTTGTGACCCAGAGTAATGGTGAAGCTGTTTCACCTTCCACTTCTGCAGACCCGACCCCGGCAGAGGCCGCTCAAATTTCTAGTGGTGAAGGCTCCTCAACAGATGGCACTGCGCTTGGCGGCGCCTCTGAGGTCGCTGATGTCGCCATGTCTGAAAGCTTGCTTGGTAAGCGGGCCATCTCCGAAGTGGAGGTCTCCACCGACGGTGACTCCGCAGGCTCGGGCACCGTCCCGGCTTCTAAGAAGGGGACGGGGAAGCCAGCTAGTCGAGCTAAGAGGGTGACCTCTTCGGAGCCCACCCGAAAGCCGCCGGCTCCGTCTTCCCTGTCGGATTCGTCCAAACGGGCGGCCTTCTCGCAGTGGCTTCGGTCCTTGCCTGTCATACCAGACTTCGTCTGTCTTCAAGAGTCTCACTGTACTTCACCTGCTGAATGTCAGTCATGGTTTTTGTCCTCCGGCTACTCGTTTGTCTCCTCTCCTGGTACCCACAAATCCTGTGGTTGCATCCTTCTGTTTCGCCCATGTTTTTCCTTGGTCTCGTCACAATTGGACGATTCCGGTCGTTTTCTCTTGTGTGGTTTTTCCTTTCGTGATATCACCTTTCGCATTGCTTGTGTATACGCTCCTAACCGCAACCCTGACCGAGACACCTTTTTTGACGACATTTCAAATAAGATCGATCCAGCGGTCCCCACGGTCCTTGCCGGAGACTTCAATACCGTTTTTGACCGGTCGTTAGACCGTCGAGGCTCCGTGGTATCGGATGTTTCCAGGGAGAGCTCTGTGACGCTTGCCCGTCTCTTCAACGACGCATGCTGCACTGACATCTGGCGCTATCTGCACCCAACAGCCCAAGGTTTTACTTGGTCGCGTGCAGATGGCCTAGTTTCTTCCCGCATTGATGTTGTCGGTTGTCCCTATGTCTGGGTAGCCTCTGTCTCCTCCTGCGACATTTTGCCCTGTCCATTCTCAGACCACTGTGCTGTGGCTCTCTCTATAGAACCCCCAAATGTGACCCCTCCCGGGCCGGGCCTGTGGAAAATCAACTCCGCTGTGTTGCAGGACTCCGCTTATGTTTCTGCTATCACCGATTTTTGGTTGGATTGGAGATCTCGTAAGAGTGATTTCCCATCCCTAGCAAAGTGGTGGGACGTTGGTAAATCCAAAATCAAGGGACTCACCATCTCTTATTGTGTCCGTCGATCTCAGAAGCAAAATCAGACACGATCACTGCTATCTAGACTTGCGGGTCATCTTAAAGGTCGTTTAGATGCCGGTATGGTCTCTTGTCTGGGTCCTTACCAGGCGGTCCTTGGCCGTTTAGCCCAGCTAGACATGGAAGCTGCCAGGGGTGCCCAAATTCGCTCGCGGGTTAAGTGGGTTGAAGAGGGAGAGGTGTCTTCCGCCTTTTTCTGTCGCCTCGAGAAAAAGAGGTCCGTCGATCGTTGGGTCTCCGCTTTGTGCCGGCCTGACGGTAGTTTTGTTTCCGATCCATCTGGCCTTTGCGCTTCTTTTTCGGACTTTTATTCCTCACTATTCTCCGCTTCGGAGACGGATGCCACTGCTAGGGAGACTCTCCTTGCCAATCTACCGGCGCCTCTCCCCCCTCATCTGTCTGAACAATGCGATGGCCTTCTTGCTATTGATGAATGTCACCACGCCCTGTTAGGAATGGCTAAAGGGAAGGCTCCGGGATCCGATGGGTTCTCGGCCGAATTCTACTGTCGTTTTTGGGATCTTCTAGGGACAGACCTTGTGGAAGTCCTTAATTCTTGCTTTCAATTTGGGTCATTATCCCTGTCTCAGCGGCGAAGTGTGATctctttgattttcaaaaaaggGGACAGGTTGGACGCCCGCAACTGGCGCCCAATCTCGCTTTTAAATGTGGACTATAAGATCGCGTCCCGAGTCATTGCTGGCCGCTTACTTAAGGTAATTCATGCCGTCGTGCATACTGATCAGACGTGTGGTGTGCCGGGTAGGTTCATCGGGGAGAACGTCGCGCTCCTTCGGGATGTCGTTGActttaccacaaacaccaactCCCCGGTAGCGATCCTCTCCTTAGACCAGGAAAAGGCCTTTGATAGGGTGGATTGGCTTTTTATGCGTTCTGTTTTGTCATCTATGGGGTTCGGTTCTTCCTTCATTCGTTGGGTAAATCTTTTTTACACCGGTGTTCAGAGTTGCGTCAATGTCAATGGGTATTTGTCTTCTTATTTCTCTTTGTCTCGTGGAGTGCGGCAGGGCTGTCCCCTGTCGCCTTTGTTGTACGTCCTTGTCTCTGAAGTCTTAGCTGTGAACATCCGTGCCAATCCTCGTATCATAGGTCTTTCCATGCCTGGCTCACCCACGCCTCTGTCGTCCATCTCTCAGTATGCCGACGACACATCTATCGTAGTCTGCTCTGATGACTCTATCCGAGCCGTGTTTGAGACCTTTTCCCTGTTCGAACGGGGTTCTGGCGCCAAGCTCAACCAGTCCAAGTCCAAAGGCTTGTGGCTGGGCTCATGGCGGAACAGGCAAGACCCCCCTATTGCTTTGGAATGGACTTCCGATAAGCTAAAAGTACTGGGAGTTTTCATTGGCCACGGGGATTTAGAGTGTGCTAATTGGAGACCCCGTCTCGACGCAGTCTCCAATGTTTTGTCCTCCTGGCGTCAACGCTCCTTGTCCTATGGAGGACGTGCCGTAGTGATAAATGCATTAGCTCTCGCGCGCTTCTGGTATGTGGCCTCCCTTGTCCATGTTCCGGATTGGGTCTATGCGGACCTCTACAAGCTTATTTTCAGGTTCTTCTGGAACGGTAAGCGAGACCTTGTTGCTCGGGTGGTAGTCACCCAGCCCCCTACGGCTGGCGGTTTTGGCGTGGTTGATCCTCGTTTGAAAGTATCTTCCCTCCTGGTACAATGGTTTCGTCGCTTGGTGGTTTCCCCCAACTCTTGGACTACCTTTTTGTCGCACTATATCACGCAGCTTGGTTTCTCCATGGAAGATGTTTTGTCATATCCACTTGCTTTTGACCTCAGTTCCTTCCCTCCCTTCTACCGCTCTCTACTGACTGCCTGGCGTTTGGTTGACGGCGCGTGGTCCTCCTCTCATGCTTCCTTTGTGATGGCATCTTCCACTCCTTTTCATGTTACTTCAGTTTGCGAGATTTCCGCTCAGTCCGTCTACCGTTTTTTGCTGTCAGAAAACCGCACGTCACCTCATTGTGTTCTCAAGTTTTTTCCGTTGTTTGGCCGACTTTATTGGCCATCGACCTGGAATCAGCTTTATTTCCTCCCTATTGACCGTCCCGTCTTAGACCTTAGTTGGAAGGTGGCCCACGGTGTTCTTTACACCGCGGACCGCCTCATCGGTTTTGGATACTCTATCGACCCCCTCTGCTTATGTGGTTTGGCTCCCGAATGTCCATCTCATCTATTTTTTTCCTGCCCTCTAGCCCAGAGCGTCCTCTCTTGGCTGCAATCTCTTCTGTTCACCTTCTCTTCTTCGTGCCCTTCTTTAACATGTCGTCATGTACTGTTTGGTTTCGCTCCAGATGAGCTTCGCTCAGTTCCTCGTGTTTTCGCCTATTTACTTAACGTGTGCAAATTCTTTATCTGGCACGCCCGCAACGACTTCCGTTTCCGGGATGTCCGCCCCGGAGCGCTGGGGGTGATCGCGAGGGTCCGGACCCGCGTGAAGTTCCACCTTCCGGTTTTCTTCCGGCGTTTCCGATCTCGTAGGCGGAGACGTTTTTTCCACCGTCAGTGGGGTGCTTCGGGCACCATTGGTCGGGTTAGTGAtggcattttttccttttctgattTTTGA

Transcript

ENSKKQT00000059392

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14381	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
P08548	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000039 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00098 all species →	zf-CCHC	Zinc knuckle	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR052343 all species →	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46890 all species →	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSKKQP00000050870.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.