Gene detail

Detailed information of ENSLDHP00000005228.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: XP_022807256.1, uncharacterized protein LOC111344300 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000005228

aaaaaaacaacaacaaaaaaggcgggaatttatcgatataccactcgcgagcgtgacatacggaaaatacgccactcggcaagtgtacaaattactttcaagttgttgttttttaaactggctatagagcgtttgcacatgacgtcacgCATTTCGCGGGAAAtgtcggcggccatgttggtgttccatAATTCACAAGCTAATATGGCGGCAACAGATCATATTACTAATCCTCTTAGCGATTACGCAAATAAGCTCGAGCTCCATGTGAAGAAACGTTATTCCCAGAAAATTTCCTGCGTTGGAATCGATCCTATGTTAATTCCAGAGAAAACATGCGATTCTGAATGTTTACCTCCGGTGGAATCTGTCGATGTACTGTCGTTTTTAGTGTTAGAAACAAGCTATTACACCAAAGAGCAATTCAAAGCCTTTCGAAGTTTAGAAGCATACAATCAACTGGCTTCAGGGTTCGTGAGCCACAAAATAGGAAACCATTTTATTGTGCTGGGGAAAGTCAAGCATTCACAAAGAATGAATGATCCATTAGTTAATCTTTGGATAATAACTGATAATAATGGTACCGTTTTGTTTGCACACTGTGTTGGTTTTATGGCTGGACAAGGTGAGTGTTGCTCGCACATTGCAAGCGTTCTGTTTTATATCGAAGCATGGAATCCTGTGAACGAGAAATTAGCATGTACGCAGATCAAATGTAGCTGGTTGTTACCTGCAGCAGTGAAAGAAGTTCCATATGCACCTGTTTCTGATATTAATTTTACATCAGCAAAAACACTTAGGAAAAATCTGGATaaaagtataaacaatttacCAACTAGCTGTATAACATCTTCGACATCAGGTCAAGCTAGTGTCACCCAAAATGGAACTGCTACAACTCCAGAAGCAACAAAGTCAAAAGCCTCCATTTCTGTGCCAAGTGCAACTGAACTTAATAACTTTTATTCAGAACTTAATCTCTGCAAGAAAAAGCCTGTGGCTTTAAGTTTGATACATCCCTTCTCTgaatattttgtttcaaaaagtAGAGACATACAAACAATTCCAGATTTATTTGACAAGAAGTTCTTAAACATGGAGTTTCACAATCTAGGCATGTTCAAATACTTTCTCTGCAGTTGTGATTGTTGTGGTGAAGGTTGTGGAGAGGTCAAGTGCCCGTACTGTTTAAAGGATGCAGAGTTCAGTGACTATATTTCCAAGGAAAACTCTTGTTTAAAGTCAGACAATGGAGTTACATTCCTCCATAGAGACCATGCCTATTACTACCAGATTCAGCAGCAAATGTTCACTACTGGTTACAAGTTTTGTGACTTTGTTGTTTGTGGCTTTACCGGTGATAAACAAATTTCTTCTACGAAAGAATTTTACCAGACATTTGACCATTGGAACATGGTTCTTCCCAAAATTAATGAGTTTTGGAGATATTGTGTCCTACCAGAAATCCTTGGCAGGTGGTATACACAGAAAAGAAATTTGTCTCAGCCTTCAGGCAGTTGTATTAAATCTGTCTGCTTTTGTCGTCAAGAAAGTACAGAATCTGTGGTAACATGTAGCAATGAATCATGCACCATTTCCGTATTTCACTTAAGTTGCTTGAAAGTTGCAAAAGTACCCAAAAAATGGTTTTGTCCCCTGTGTCAAAAAACAAATTCTGTCAATAATAAGAATTTAAAAGCAAAGCAAACAAAGGAACTCTTGGACGAAGCTCTTAAGTTACCATGCATCTGTGTCTGCAAAGAGAAGCCAATATATTCAGATAAACTCCTGAAATGCCATAATGCAGCGTGTAAAAATGGAAAGTTTTTCCATTTAACTTGTCTCAACCTGAAACGCAAGCCAAACAATTCACTTACAACATGGCAGTGTTCAGGTTGTAAATCAGAAGTCAAAGCTAACAGCTCTTCGAATACACAGAAGCTGGATAGTGATGTTATTATAACTAAAGTAACATTTAATTTGGTTTTGTCTCCCTGTGGATGGCTTGACTGTGATATCATTCATGCAGTACATATATGTCTTCAAAATGTTAATCCCGGAGTTGATGGGCTGCAAAGACCAACTTTGGGACCTGTAAAAAATTTCACCCAAGTTAGTGGAGAATTTTTTCAGATCTTGCACACCGGTAATTCACACTGGGTATGTGTTGGTACAGTACAATGTGAAGATGAAACAgcaaattttgttttattaaaacgaaatttgaaccaaatttatcgtgtttcagtaaataagcgactgtcactaactatgtgtgaagtttcagcagcaaatttcgaaatttcgctaagaaaatacacgatgaaaaaatgcatattttctgcgagaactaagtgtcaaacaattgtttacaagcaaaaacttgtgcattttatctttcataaaaaaataatcgtcaaaaacaataattttgccacccaaaaatggcggatattaaggcctgAAAATGGTAAGATAACCCGCGGGACATTTGCGTGTAAATATATGTGTCGCGGGACCGACGCGCGAAATGTGATGTCAAAAACAAATATGGAGGCTGTATTCAGAAAGGTTTGCGAGGTTTTTGGTTTTgagaaattaaataatttccaGATGGATGCTATTGTGCATATTTTAGATAAAGGAAGTGACATTTTTGTCAATCTCCCAACAGGATACGGAAAATCTGTAATATTTCAGGCCATTCCAGTGGTCTTTGATTATGTTGGAAATCCTATCGTTATTGTGGTGTCACCCCTAGTAAGTCTTATGAAAGATCAGGTTGCTCGCTTAAATTTATGTAATATACCATCTGTATTGCTTACTGACATTGCGCCAGACGAAGAAGAACGCGTTCTTCGTGGTGAATTTGCTGTTGTATTCGGATCGCCAGAATCTTGGCTGAATACAGAGAAGTGGAGAAAAATGGTCGGAAGTTCCGTGTACAAGAACCGGGTAAAAGCTGTTGCAGTGCATGAAGCCCATGTTATAAGTCACTGGTACGCtactttacatatatatatttatatttggttattgtttatttatacATTTCAACAGCGAAAATATTGGCTAAATTACAATGTGTTCACATGCTAA

Transcript

Protein

Uniprot

Uniprot term	Description
P35187	ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SGS1 PE=1 SV=1
O09053	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3
Q09811	ATP-dependent DNA helicase hus2/rqh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rqh1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011604	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001965	Domain	Zinc finger, PHD-type	Interproscan
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47526	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan