Gene detail

Detailed information of ENSLDHP00000010828.1 in Eunicella cavolini

Genomic Location: chr11:1479200...1505645
NR annotation: CAB3993096.1, Protocadherin Fat 4, partial [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000011685

ATGACATCAAGGACAAAAAGTAAACTGGATGTACTAGCCTCGTTGGTAAAAAATGAATGGAGTAAGAAAGTGCGCGTGATACAAGCCTGGACTGATCAGGTTGTGGCTTCTGACCCAACTTCTTTACATTATGAAGGTCGCTCAGTACGACTTCAATCAAACGACCAAGACAAGGGTAAACTTGGTCGTTTAGCGGGACTCGCTATCGAAGCCGGCTTTGACTGGGTCGAGTACAAACACTCGGAATACATCCGGGCTTCAGTTATCCCGGATGTTTGTCAAACATCAGTGGACCTTGTCTTCGTTCTTGATAACTCGGGAAGCGTAGGGGCTACGAATTTCGAAAAGGTTAAAGATTTTGTCAAGCGTGTTATAGACTTCTTTAACATCGGCGTAGATGGTACACACGTCTCCGTGGTGACGTACGATACAGACACACATATTGAGTTTAATCTTAAGAAATATTTCACAAAGAACGAGTTGCGAAATGCAGTCGACGACATTGAATACCATGGCTTTCTGACATACACTGGTGAAGCCTTGAATACGGTTAAGCAGAAAGTCCTAACTGCAAGTGCTGGAATGAGAACCGATGCTGGTATCCCAAAGGTTTTATTGTTGCTTACCGATGGTTTCTCAAATGGTATAAAACCCGGCTTCGCCGCAAGCGCACTCCGAAATTTGGGTGTTAGTATCTTCAGTATTGGCGTGGGACAGTCTGTATCTGTGGCAGAACTGAACGAAATCGCTTCGGACCCAGATACAGACTATGTGTTTAGGTTGAATAACTTCAATGAATTGGCTAGTTTTGTGGATAGAGTCAGTTCTGTTTCTTGTAGTGAGGGATCTGTGATTAAGTCGTGCGACGTTGCGGAGACAAGTGTCGAGAGTGGTTCATTTAAATATTTCCGAACGACATTTGATGTCGTCACAAAAGATGAAGTCAGTATTGAAGTCAGAGATACATTTGGTATCAGTCATTTATACGCATCTGCTACGAGTAGAAATCCCGGACCTCTGGACAAAGATAGCGAGAAGAATGAAGATGACACAAGTCCCAAGGCTGTTTCACTTAAAGTTGATGATAACACGAAGACGGTGTATGTTGCTGTGCAAGGCCAAAAAGATGATAATAGGTTCAGTTTATCATTTTGGGATAACTTGTTTGCGAACAGAGGAAATTTCCAAGTGAATGTAGCAGAAGGTCTGGATGCACGTGAAATAATTACTCTAAACATGGTGTTACATCCTTACGACCTAGAGTTCCGCATAACAGATGGTGACCAGACTGTGTTCAGCATTGAAAAATCAGGTTCTTTGAATCCCAAACTCTCAACGAAGGTGAAACTCGACTATGAAGTCACAACACAATACAGCGTGGTCGTTGTAGCGCAAGATAAAGCTAATCAATGCCACAAAAGTCGAGCTCTGGTCCAGATTAATGTCGTTGACCTCAATGATAATTACCCGACATTCAGTAAGGATGAGTATACAGCCAGAATTGCCGAGAATGCTCAGAGTGGCACCCTTGCTATTAAGGTGGAAGCCACCGACTTGGATTCAGGTGAAAATGGGAAAATTACTTATAGTATTGCATCTTCGACCGCACCAGGGCTTTTCAACATTGATTCCAATGGAGCTGTCACATTACAAGGCTCTCTGAACTTTGAGGTTGAAGCCTCCTATACACTGACTATAATGGCTAAAGATAATGGCTCGCCAAGTTTGAATACAACTGCCGTGCTGAAAATTTCTGTGATCGACATCAACGAACAGCCGAGCATACGTTGTGATGGTAGTTGTGTATACACGGTCTCCGAAGGTGTGTCAAGTGGGGCACCAATTGGAAACCTTACAACAACCGACCCGGACACAGTCGCGAACTGTTTACTACAGTACAGCATGCCCGAAGCGGCAGCCAAGAAATTCACTGTTTCCAGTGACGGAAAAATTTCAACCATAGCTAGCCTTGACCGTGAGACACAGCAGCAGTATTTATTTTATATCACAGTGAGGGATTGTGGGTCACCTCAGCTGACCGATAGTGTTCGCGTTACCATCACAGTCAGTGACGTCAATGATAATAAGCCCCAGTTCCCTGGTCCGTACAACGTGGATATATCTGAAAGTGAATCAAGTGGTAGCAGAGTTGTACAAGTCAAAGCCACTGATGCGGACGAAGGGCGTAATGCTGAGATAAAATATACGCTGACCGCAGGCGACTACTTGAACTTCGAAATCAATGAAGATGATGGAACTATCAAAACAACCTCAAAACTTGACTATGAAACAAAGAAAAGCTACACGTTTACTGTGACTGCAACAGATCAAGGACCTGGCGATAGCACTGGTCAAACTACAGTCACCGTGAATGTTCTTGACGTTAATGATAATGCACCGTCCTTCTTAGATACACCCTATATTGCTAACGTTAAGGAAAGTGCTGGACTCGGGACTCATGTTATTGATGTCAATGCTACCGATAGCGACTCAGGATCTGGAGGAGAGTTGAAGTATTCTATTATTTCTGGTAATACCAGACTTGGTTTTGCTATTCATGAAGACACTGGTTTGATCACCGTCAATTCTGCTCTCGATCAAGAAACTATACCATCCTACACCTTGCGTGTCCAAGCAAAAGACAACGGTTCCCCTTCGCTTCACTCTCAAGTCACAGTCACTATAATGGTCCGAGATACGAACGACAACAAGCCTATCTTTCAAGGATTGCCCTATACTGCATCTGTTCCCGAGGGTTTTGGTACGACTCAACCTGTTCTCAAGGTGTCTGCTACAGATGCTGATAATGGGGTGTTTGGTCAAATTACGTACAGTATAGATTCTGCTACTATTGCAAAGGATACATTCACTATTGATAATGATGGCAATATCCGCGTGAAAACGTCATTGGACTACGAAACAAAGAAAGATTACAGTTTCAAAATCGTGGCTAAAGATGGCGGCAACGAGACCACTACAGCAGAGGTCACTATCTACGTCACTGACGTGAACGACAATGAGCCTCGTTTTGAAAAGAACCCATACACCGAGTCCTTCGCTGAGAATCTGAATACAGGTCACATTGTAGGTACAGTCAAAGCAAATGATGAGGATTCTGGTCAGCTGGGTTCTGTCACCTATTCAATCATTGGCGGGAATATTGGGAACCCATTTACAATCAATGCTGAAGGTGAAGTCATTGCTCTAATCCGCTTCGATCGCGAAACTCAAGAATTCTACAACCTGACGATCCAAGCAAAAGATGGTGGATCGCCAGCAATGAGCTCGACAACACAAATGGAGATAACGATACTGGACGAAAACGACAACACGCCATCTTTTGACAAGAAATTCTACTCCTTTAGTATCAACGAGAACAACGCTCTGGGCGAAGAGGTTGGAACATTTGGACCAGCAGTGGACAACGATAAAGGAGCGAATGGAGAGATTATGTACACCATTTTCAGTGGTGATCCTAAAAGTAATTTTGAGTATGACGGTACAACTGGAAAACTGAAGGCAAAGAATGTCCTAGACCGTGAAACATCTTCGGTCTATACTCTTGGTGTCAGAGCTAGCGACAAAGGCAATCCTCCACGTTCGTCAACAGTGCTGGTACAAATTGTAGTTCTGGACGAGAATGATAACTCTCCCGTTTTCTCGGAAGATCCATATAATTGCGAGATTGATGAAAATTCTGCTATCAATTCCCGTGTTTGTTTTGTCTCTGCCTCGGATAGCGATGATGGGAAAAATAGTGTTGTGACTTATGAACTGGTTACATCAAGTACTACCTTCAGTGTTGACAAGGACAATGGTGAAATCAAAGCCTTGGTAACGTTAGATAGAGAGGACACTCCTTCGTACACTTTTGATATTATTGCAAAAGACAGTGGTTCACCAAGTAAAAACGCAACAGTAACAGTACACGTCAAAGTCGTGGACAAAAACGACAATGAACCGCGATTCAACCAATCCTCGTACAGTTTTGATGTAAGTGAAGCTGCTCAGGTGAACACTGTGGTTGGACAAGTTTTCGCTGAGGATAAGGACGAAGGATTGAGTGGCGAGGTGGTTTATAGAATTACTGCAGGAAATACTGGCACTGCATTTTCAATTAACGACACAACAGGAGTTATTTCAGTCAAGTCTAGTTTGGATCGTGAAACGATCGCCAGCTACAAATTGACTGTTGAAGCCTCTGATCGTGGTACGCCGTCTCAGTTCTCTACTCGTGAAGTCGTTATCACAGTGACAGATATTAATGATAATGATCCAATCTTCACCGGTGACCCGTATCAAGGCACGATCAACGAAGACGCTTCGGTTGGATCTCCAGTTGTACAGGTGAAAGCTACAGACGCAGATGCGGGAGTGAACAGTCAAATTAAATACAGTATAACTGGAGGAAATAATAGCAACCACTTTAGTATTGATGAAGATTCTGGATTTATTGATACTGCAGTTAAACTGGACTTCGAAACCAAGCAATCATATACACTAACTGTCACAGCCAGTGATGGTGGCAATCCAAAACGGACAGACACAGCTCAGGTGAACATTACAGTTGAAAACGCCAACGACAACGCGCCCGAATTTGAACCTGGTTCACCTGTCGTCAACGTGAGCGAAGCCGTTGCCATAGGAACGAATGTGGTGAAATTCCAGGCTACCGACAAAGATGGTAACTCGCTGGCTTTCCTTATAACCGCCGGCAATACAGGAGACACGTTTAGTGTTGATAAAAACACCGGAGTATTAACAACCAATGCAAGCTTAGATCGAGAAACAATACCGACATATAATCTAACGGTTACTGTAACAGATAACGGCGGGCAGAGTTCATCCAGGAATCTTATCGTTAATGTGTTAGATGAGAACGATAATGCACCTCGTTTTGATCCAGCCTCGTATTCGAAAAATATCACAGAGAACACAGTAGCAGGTCCTGTAGTAACAGTGACGGCGACAGACAACGATGAAGGCGATAACGCTAAGATCACCTACTCCATCGACTCCACCTCTGAGGATAAATTCATGATAGACCCAGTATCCGGGCAAATCTCTACCAAAGCACCGCTGAATTACGAAGAGAGCCCTCGTTACGAGATCACGGTGACCGCAAAGGACTCTGGGACGCCTTCGTTGTCATCCACCGCTCTGGTCGTTGTGACGGTTAGAGATCTTAATGACAACAATCCTAATTTCCCAAATGACTATACTACGTCGTTACGGGAGAATACTGCTGAGGGTACGGTGATACGGGTTGAGGCAAATGATCCTGACTCAGGCGTTAATGGAGAGATTGAATATACGATCACTGCTGGTGACGATGGGTTCTTCACAATTGGAAGATCAGATGGGATCATAAAGGTCGCTAAACCTCCAGATCGAGAACAAAATTCATCATTCACCCTAACTGTCACCGCTAGCAACAAAGTTCCTGCGGATCCCTCAGCGCCCTTGGCCAAGTCCACGGCAACGGTTACCATAACAATTGATGACGTCAACGACAATGCACCAATCATAACCAACCCAGAGACGTCAGTAGAAATTCAAGAAAATTCTCCCAAAGATACTAAAGTTATTGATGTGGATGCCATTGACAATGATATCGGAGTCAACAGCGAAATTGAGtATGAAATTGTGGATGGAAATGTGGGTAATGTCTTTGCAATCAACAAAACGAATGGTCTAATAACAGTACAGGGTGTCATAGATCATGAAACACGCAAGTCATACACGCTTAAAGTTCGTGTTTCTGATAAAGGGAGCCCACGTCTGTCTTCTGAGAAAGAATTCTTGGTGAATGTTACAGATTTGGATGATAATTATCCTGTGTTTACCGCACAGCCGTATGAAGGGTCTGTGAGCGAAGCTGCAAATGTTTCAACATTCGTGATTCAAGTGAAGGCCTCTGACGATGATGATGGCGATAACGGAAAACTCAAATTCTCCATCGTATCTGGCGATGACCAAAAACATTTCAGAATTGATACAGAAGCCGGGAACGTTTTTACAGGCGCGGCTCTCGACTTTGAAACCATCCCTGAGTACACTCTCCGGGTCAGAGTTGAGGACAAAACCCACAGTGTTGAAACTAACGTGATAATACGGCTGATCAATATCAATGATAATGATCCTATATTTAATCCTGCACGTTACGAGGAAAGCATTGCAGAAAATCGCGGACAAGGAGACGCATTCGTTACCCTAAACGCAACAGACGAAGACGCTTTTGGTGGGCTAACATACACGATTGTCAGCGGAAATACAGACAGTAGATTCACTCTTGAACCTGGAAGCGGACAACTCCGAGTAGCAGGCGATTTAGACCGAGAGACGACCGATTTTTACAACCTAACAGTACGAGTTACCGACGGCGGTGCTCCGGCTCGTTTCGATACTGCGTTCGTGGCGATTCGTATTACGGATGTTAACGATAACCCGCCGAGGTTTAATACATCACGTCAGCAGGTGTCTGTAATGGAAAACTCCGGTGTCGGAACTCGGGTGCTAACAGTGTTTGCTGAGGATAAGGATATTGGAAGGAATGGAGAGGTGTGGTATAATATTACCAACGGAAATAATGCAGGATTGTTTGAGCTGGGCAAAAGCTCTGGAGTCTTGACGGTGAATGGAAACATTGATCGGGAAAAAGTCACTAATTTCAGACTGGAAATCATTGCACAAGACAAAGGCGTGACCCCAATGACATCATCTCCTCTCATCGTTGACATTGAAGTCCTTGACACGAATGACAACAGTCCTAAATTCACAAAAGACAATTATACGCGAAGTATTTCTGAGACCAGTTCCGTTGGATCGTTCGTTGAAGAGGTGCAAGCGATGGACGCAGATATCGGTATGAACGCCAAGGTTGTTTACTCGCTGCTCAACGGAACAgaatatttcaaaattgaaaatgaaaCTGgTGTCATATCGACAATCGTTGGTCTGGACAGAGAAGCCATTCCCTATTTCACCATAATTGTCTTTGCGAAAGATCTTGGTAACCCATCACGAAATTCAACCGCCCCCCTGATTATCACCGTGCTTGACGCCAACGATAACTCCCCGGTGTTCAGTCACACGCCACTCCGGGCGAACGTTACCGAAGAGATAAAGAATCAGACAGTGATACAATTGGTGGCGACCGATGCCGACGATGGCCCGAACGCAGAGATCGAGTACAAGTTAGAATCCAATGCTAAGCAATTCTTGGTTATTGATTCCCAGACTGGAATTGTTACCACACAGGTTGCTTTCGATTTTGAGGCTCAACGAAATCATACTTTTAAAGTTATCGCATCTGATAAAGGAAATCCACCTCTTTCCACGACTGCAACGCTGTATATTAACGTTTTGGATACGGATGACAACTGTCCTGTATTCAATCCGAAGGAGTATAACGTGACGATTGAGGAAAACAAACCTCTTAATGAGACCATTGTTACTGTGCTTGCCACAGATATAGACACTGTTGGAGAGCAAACTTTAGAGTATGGTATTAGAAGGGGAGATCCTAACAATTTCCTTATAATGGGCCGATACAACGGTGAGATCAGATCTGCGAAGTTTGTAGATCGGGACGTTGATGGTGGTAACGAAATCAACGTGATCGTCAGAGCAGGGGATGAAAACTGTGGTGTTAACACCACGGGCGACATAGATGAACTTGTGGATGTAAGGCTATCAAACTCCATCGCAAGAGTGAACGTCTTTGTAACAGATCAAAACGACAATCCTCCAATTTTCCTGCAAGACTCGTACAAGCATGAACTAAGTGATATCTATGTTAAAACGTTGTTGTGGTTGAATGCAACCGATCCTGATGAAGGAGTGAATGCCGAGTTTGATTTTGGACTGTATGGAGTAACTAGGGATGGCTTCAAACGAACGTTGACAGTGACAGCCACGGATAAAGGAGTTCCAACGCAGACTTCCAACACGACTGTTGAAGTAATTGGGAAAAATTGTGAAGCTATGACATTCTCAGTGTCGCCCCGTGGTAACGTATTAGTGAAGACTTTGTGCCGTTTTGAAACATTGTCAATGACTGGCAAAGATTTAGTGGGAGAAAAAGTCACGCTCTCCTGCAGTGCTGTCGGCAACACGGTGCCGGAGTATCGTTGGACAAAAAATGGCGTGCCTGTCACAGATTGGCAAAATACTGGCGTATTTGAGTTCAAATCTTTACGTAAAGACAACGCTGGCCAGTACTCTTGTATTGCCTCCAGTGATGCAGGAAATATTGTGTCTGAAACTATCACAATTCATGCCAGAGAGCCGGCCAAAATTTCAGTTCCACCCAAAAAGACTTCGGCTCAAGTCGGACAAGCAGCCACATTGAGTTGCCGAGCAACGGGAGATGAGCCAATCAGGTATTCGTGGTACAAGGATGGTAAGATACTGCAGTCAAATGCTGAGTTTGATTACAACAAACCAGATATTGTTTTTGGAAAAGTATTAAGAACGGATGAAGGAGGTTATGTGTGTAAAGTCGAGAATAACAATGGAAGTAGTGAATCTCAGTCCGCCGTGTTGCAAGTGTATGCTATATCGGCGGTTGTTGAATTGGATATTAACGTCAATAATCCGCGAGAGAAGGAGAACTGTCAGCTCTTCAACATATCATCAGTGACGGAAACTCTGAAAGAATTAATTGATGGCTCAGTTACAGTTGTGGAATTTAAACAGCCAGCAGCAATGTGTAACATAACAGCGTGTTCGTCGGATCCTTGCCGTAACCAGGGCAAGTGTATTGTCAGAGGATCCAGCTTTGTTTGTCAGTGTCCAAGAGGATGGGGTGGTCGGTATTGTGAACAGGATTCCAATGAATGTAAAGCTTGTGTGGGGAGTGTTTGTGTCACGTCTAAAGAAACCTGCCAAAATAATGGCACATGCGAAAACAGACCAGGAGGTTTCTCGTGCGCATGTCCCAACCCTAACGTCACTGGTAAACTATGTCAGTTCAATAAGGAGAAAGCCTGCAAGGGAAAATGTCAGTCTGGTGAGACGTGCTTCCCTAAGGAGAATGACGTGGGTTATGAGTGTATCACTGATGTTCGGACCGTGTCGATGGTGTACAATTTGGACAGCAACCAGATACCATTTCGAGCTTGGATGATATATGATATTGCTCAAAATGTTGAGAATGCTATTGTTACTACTGGTCTTAACAAGGTATCACCAAACGTCAAAGAGAGACGAAAACGCCGTGACACCAAGGCCGTAGACTACGGCGCGTGCTCAGTTCGCGTGACAGATTACGAGGTCTTAGAGTCGACATTAGAAATGACAATCACCTTGGTGTGTACAGACTCACCTAGCAAGACATTCGTATGCAACGCCTTGTTGGCTGAAGGAACGGTCCGGTCTTGTACTGGAGATGGTGATCAAGTTTTCACAAAACAAGAAACTACGCAAGCATCTCCACTCTCAAGTATTCCAGTGACTGTTGTGTTTATTGTTCGCGATGAGAACAATAAAGATACCACGGCTAGTAAAGTAGTCGACGATCTAAAAAGTAAAGAGATTTTCAAGAAACTTCAAAAGAATGGAATGACTGTTACTGACATTAAACCACGATCTACTCCGACAAATGAACCGCAAGGTATTTATTTTACCATTCTATTGGACTTACTTCAGTCTAGTTAA

Protein

ENSLDHP00000010828.1

MTSRTKSKLDVLASLVKNEWSKKVRVIQAWTDQVVASDPTSLHYEGRSVRLQSNDQDKGKLGRLAGLAIEAGFDWVEYKHSEYIRASVIPDVCQTSVDLVFVLDNSGSVGATNFEKVKDFVKRVIDFFNIGVDGTHVSVVTYDTDTHIEFNLKKYFTKNELRNAVDDIEYHGFLTYTGEALNTVKQKVLTASAGMRTDAGIPKVLLLLTDGFSNGIKPGFAASALRNLGVSIFSIGVGQSVSVAELNEIASDPDTDYVFRLNNFNELASFVDRVSSVSCSEGSVIKSCDVAETSVESGSFKYFRTTFDVVTKDEVSIEVRDTFGISHLYASATSRNPGPLDKDSEKNEDDTSPKAVSLKVDDNTKTVYVAVQGQKDDNRFSLSFWDNLFANRGNFQVNVAEGLDAREIITLNMVLHPYDLEFRITDGDQTVFSIEKSGSLNPKLSTKVKLDYEVTTQYSVVVVAQDKANQCHKSRALVQINVVDLNDNYPTFSKDEYTARIAENAQSGTLAIKVEATDLDSGENGKITYSIASSTAPGLFNIDSNGAVTLQGSLNFEVEASYTLTIMAKDNGSPSLNTTAVLKISVIDINEQPSIRCDGSCVYTVSEGVSSGAPIGNLTTTDPDTVANCLLQYSMPEAAAKKFTVSSDGKISTIASLDRETQQQYLFYITVRDCGSPQLTDSVRVTITVSDVNDNKPQFPGPYNVDISESESSGSRVVQVKATDADEGRNAEIKYTLTAGDYLNFEINEDDGTIKTTSKLDYETKKSYTFTVTATDQGPGDSTGQTTVTVNVLDVNDNAPSFLDTPYIANVKESAGLGTHVIDVNATDSDSGSGGELKYSIISGNTRLGFAIHEDTGLITVNSALDQETIPSYTLRVQAKDNGSPSLHSQVTVTIMVRDTNDNKPIFQGLPYTASVPEGFGTTQPVLKVSATDADNGVFGQITYSIDSATIAKDTFTIDNDGNIRVKTSLDYETKKDYSFKIVAKDGGNETTTAEVTIYVTDVNDNEPRFEKNPYTESFAENLNTGHIVGTVKANDEDSGQLGSVTYSIIGGNIGNPFTINAEGEVIALIRFDRETQEFYNLTIQAKDGGSPAMSSTTQMEITILDENDNTPSFDKKFYSFSINENNALGEEVGTFGPAVDNDKGANGEIMYTIFSGDPKSNFEYDGTTGKLKAKNVLDRETSSVYTLGVRASDKGNPPRSSTVLVQIVVLDENDNSPVFSEDPYNCEIDENSAINSRVCFVSASDSDDGKNSVVTYELVTSSTTFSVDKDNGEIKALVTLDREDTPSYTFDIIAKDSGSPSKNATVTVHVKVVDKNDNEPRFNQSSYSFDVSEAAQVNTVVGQVFAEDKDEGLSGEVVYRITAGNTGTAFSINDTTGVISVKSSLDRETIASYKLTVEASDRGTPSQFSTREVVITVTDINDNDPIFTGDPYQGTINEDASVGSPVVQVKATDADAGVNSQIKYSITGGNNSNHFSIDEDSGFIDTAVKLDFETKQSYTLTVTASDGGNPKRTDTAQVNITVENANDNAPEFEPGSPVVNVSEAVAIGTNVVKFQATDKDGNSLAFLITAGNTGDTFSVDKNTGVLTTNASLDRETIPTYNLTVTVTDNGGQSSSRNLIVNVLDENDNAPRFDPASYSKNITENTVAGPVVTVTATDNDEGDNAKITYSIDSTSEDKFMIDPVSGQISTKAPLNYEESPRYEITVTAKDSGTPSLSSTALVVVTVRDLNDNNPNFPNDYTTSLRENTAEGTVIRVEANDPDSGVNGEIEYTITAGDDGFFTIGRSDGIIKVAKPPDREQNSSFTLTVTASNKVPADPSAPLAKSTATVTITIDDVNDNAPIITNPETSVEIQENSPKDTKVIDVDAIDNDIGVNSEIEYEIVDGNVGNVFAINKTNGLITVQGVIDHETRKSYTLKVRVSDKGSPRLSSEKEFLVNVTDLDDNYPVFTAQPYEGSVSEAANVSTFVIQVKASDDDDGDNGKLKFSIVSGDDQKHFRIDTEAGNVFTGAALDFETIPEYTLRVRVEDKTHSVETNVIIRLININDNDPIFNPARYEESIAENRGQGDAFVTLNATDEDAFGGLTYTIVSGNTDSRFTLEPGSGQLRVAGDLDRETTDFYNLTVRVTDGGAPARFDTAFVAIRITDVNDNPPRFNTSRQQVSVMENSGVGTRVLTVFAEDKDIGRNGEVWYNITNGNNAGLFELGKSSGVLTVNGNIDREKVTNFRLEIIAQDKGVTPMTSSPLIVDIEVLDTNDNSPKFTKDNYTRSISETSSVGSFVEEVQAMDADIGMNAKVVYSLLNGTEYFKIENETGVISTIVGLDREAIPYFTIIVFAKDLGNPSRNSTAPLIITVLDANDNSPVFSHTPLRANVTEEIKNQTVIQLVATDADDGPNAEIEYKLESNAKQFLVIDSQTGIVTTQVAFDFEAQRNHTFKVIASDKGNPPLSTTATLYINVLDTDDNCPVFNPKEYNVTIEENKPLNETIVTVLATDIDTVGEQTLEYGIRRGDPNNFLIMGRYNGEIRSAKFVDRDVDGGNEINVIVRAGDENCGVNTTGDIDELVDVRLSNSIARVNVFVTDQNDNPPIFLQDSYKHELSDIYVKTLLWLNATDPDEGVNAEFDFGLYGVTRDGFKRTLTVTATDKGVPTQTSNTTVEVIGKNCEAMTFSVSPRGNVLVKTLCRFETLSMTGKDLVGEKVTLSCSAVGNTVPEYRWTKNGVPVTDWQNTGVFEFKSLRKDNAGQYSCIASSDAGNIVSETITIHAREPAKISVPPKKTSAQVGQAATLSCRATGDEPIRYSWYKDGKILQSNAEFDYNKPDIVFGKVLRTDEGGYVCKVENNNGSSESQSAVLQVYAISAVVELDINVNNPREKENCQLFNISSVTETLKELIDGSVTVVEFKQPAAMCNITACSSDPCRNQGKCIVRGSSFVCQCPRGWGGRYCEQDSNECKACVGSVCVTSKETCQNNGTCENRPGGFSCACPNPNVTGKLCQFNKEKACKGKCQSGETCFPKENDVGYECITDVRTVSMVYNLDSNQIPFRAWMIYDIAQNVENAIVTTGLNKVSPNVKERRKRRDTKAVDYGACSVRVTDYEVLESTLEMTITLVCTDSPSKTFVCNALLAEGTVRSCTGDGDQVFTKQETTQASPLSSIPVTVVFIVRDENNKDTTASKVVDDLKSKEIFKKLQKNGMTVTDIKPRSTPTNEPQGIYFTILLDLLQSS

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2PZL6	Protocadherin Fat 4 OS=Mus musculus OX=10090 GN=Fat4 PE=1 SV=2
Q6V0I7	Protocadherin Fat 4 OS=Homo sapiens OX=9606 GN=FAT4 PE=1 SV=2
Q99PF4	Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000196 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF00092 all species →	VWA	von Willebrand factor type A domain	Domain	Interproscan
PF00028 all species →	Cadherin	Cadherin domain	Domain	Interproscan
PF01085 all species →	HH_signal	Hedgehog amino-terminal signalling domain	Domain	Interproscan
PF13927 all species →	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002126 all species →	Domain	Cadherin-like	Interproscan
IPR018097 all species →	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR002035 all species →	Domain	von Willebrand factor, type A	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR020894 all species →	Conserved_site	Cadherin conserved site	Interproscan
IPR001657 all species →	Family	Hedgehog protein	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR009045 all species →	Homologous_superfamily	Hedgehog signalling/DD-peptidase zinc-binding domain superfamily	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR015919 all species →	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR000152 all species →	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR000320 all species →	Domain	Hedgehog, N-terminal signalling domain	Interproscan
IPR001881 all species →	Domain	EGF-like calcium-binding domain	Interproscan
IPR039808 all species →	Family	Cadherin	Interproscan
IPR003598 all species →	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24027 all species →	CADHERIN-23	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan
GO:0007156 all species →	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007155 all species →	Biological Process	cell adhesion	Interproscan
GO:0007267 all species →	Biological Process	cell-cell signaling	Interproscan
GO:0007275 all species →	Biological Process	multicellular organism development	Interproscan
GO:0016342 all species →	Cellular Component	catenin complex	Interproscan
GO:0045296 all species →	Molecular Function	cadherin binding	Interproscan
GO:0098609 all species →	Biological Process	cell-cell adhesion	Interproscan
GO:0098742 all species →	Biological Process	cell-cell adhesion via plasma-membrane adhesion molecules	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000010828.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Eunicella cavolini tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Eunicella cavolini, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →